BLASTX nr result

ID: Atractylodes21_contig00027893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027893
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326874.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-36
ref|XP_002272894.1| PREDICTED: uncharacterized protein LOC100244...   152   2e-35
ref|XP_002876552.1| hypothetical protein ARALYDRAFT_907562 [Arab...   144   1e-32
ref|XP_002511611.1| conserved hypothetical protein [Ricinus comm...   138   4e-31
ref|NP_191599.1| Mitochondrial transcription termination factor ...   138   5e-31

>ref|XP_002326874.1| predicted protein [Populus trichocarpa] gi|222835189|gb|EEE73624.1|
           predicted protein [Populus trichocarpa]
          Length = 575

 Score =  155 bits (393), Expect = 2e-36
 Identities = 75/138 (54%), Positives = 101/138 (73%), Gaps = 1/138 (0%)
 Frame = -1

Query: 412 KRIVVDFDLISDVEGSVDAWIEVCGKIQMFYNLGCRKLDIWEMMGRSKSILIEYPEEILA 233
           KR+ VDFDL S VEG+VDAW EVC KI++FY+LGC K  + E+MG+SK I ++YP E+L 
Sbjct: 213 KRVFVDFDLESCVEGNVDAWYEVCRKIRVFYDLGCEKGKVGELMGKSKRIFVDYPVEVLV 272

Query: 232 EQIEFFCRFHVTKEEVMSLLLLGMEIFEFDLKSP-FCVVGLLRHFGLDEKDLNSIIEKYP 56
           ++ EFFC+F V KE+V  LLL    I +F L+     V GLL+HFGL  ++L S+ + Y 
Sbjct: 273 QKAEFFCKFGVRKEDVGLLLLTKPGILDFQLEGQVISVKGLLKHFGLSAEELKSVAQNYG 332

Query: 55  YVFGRNRLTNLPHVMRAL 2
           +VFGRN++ NLPHVMRA+
Sbjct: 333 HVFGRNKMANLPHVMRAM 350


>ref|XP_002272894.1| PREDICTED: uncharacterized protein LOC100244389 [Vitis vinifera]
          Length = 561

 Score =  152 bits (385), Expect = 2e-35
 Identities = 75/138 (54%), Positives = 99/138 (71%), Gaps = 1/138 (0%)
 Frame = -1

Query: 412 KRIVVDFDLISDVEGSVDAWIEVCGKIQMFYNLGCRKLDIWEMMGRSKSILIEYPEEILA 233
           KR+ VDFDL S VE +VDAW E+C KI++FY+LGC K  I E+MGRS++I +EY EE+L 
Sbjct: 216 KRVFVDFDLGSFVEENVDAWYEICRKIRLFYDLGCEKGKIGELMGRSRNIFLEYSEEVLV 275

Query: 232 EQIEFFCRFHVTKEEVMSLLLLGMEIFEFDLKSP-FCVVGLLRHFGLDEKDLNSIIEKYP 56
            +++FFCR +V K  +  LLL   EI  FDL++P   V+G L+HFGL  +   S+   YP
Sbjct: 276 RKMDFFCRLNVRKAGIGLLLLECPEILSFDLEAPVISVMGFLKHFGLGLQKSKSVARMYP 335

Query: 55  YVFGRNRLTNLPHVMRAL 2
           YV GRN++ NLPHVMRAL
Sbjct: 336 YVLGRNKMANLPHVMRAL 353


>ref|XP_002876552.1| hypothetical protein ARALYDRAFT_907562 [Arabidopsis lyrata subsp.
           lyrata] gi|297322390|gb|EFH52811.1| hypothetical protein
           ARALYDRAFT_907562 [Arabidopsis lyrata subsp. lyrata]
          Length = 560

 Score =  144 bits (362), Expect = 1e-32
 Identities = 66/138 (47%), Positives = 99/138 (71%), Gaps = 1/138 (0%)
 Frame = -1

Query: 412 KRIVVDFDLISDVEGSVDAWIEVCGKIQMFYNLGCRKLDIWEMMGRSKSILIEYPEEILA 233
           KR+  +FD     E +VD+W+ V  KI++FY+LGC   ++WE+MGR+KS+ +EY EE L 
Sbjct: 209 KRLFDEFDSQHLCEENVDSWLAVSRKIRVFYDLGCENEEMWELMGRNKSLFLEYSEEALV 268

Query: 232 EQIEFFCRFHVTKEEVMSLLLLGMEIFEFDLKSP-FCVVGLLRHFGLDEKDLNSIIEKYP 56
           ++ E+FCRF V KE+V  L+L    I  FDL+ P   V G+L+HFGL + +++++ +KYP
Sbjct: 269 KKAEYFCRFGVRKEDVALLILRNPAIMNFDLEKPVISVTGMLKHFGLRQDEVDAVAQKYP 328

Query: 55  YVFGRNRLTNLPHVMRAL 2
           YV GRN+L NLP+V+RA+
Sbjct: 329 YVLGRNKLKNLPYVLRAI 346


>ref|XP_002511611.1| conserved hypothetical protein [Ricinus communis]
           gi|223548791|gb|EEF50280.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 561

 Score =  138 bits (348), Expect = 4e-31
 Identities = 66/138 (47%), Positives = 100/138 (72%), Gaps = 1/138 (0%)
 Frame = -1

Query: 412 KRIVVDFDLISDVEGSVDAWIEVCGKIQMFYNLGCRKLDIWEMMGRSKSILIEYPEEILA 233
           KR  +DF++ S V+G VDAW ++C KI++FY+LG  K  + +++G+SK+I I+ P E+L 
Sbjct: 206 KRAFIDFNMGSCVQGHVDAWYDICLKIRVFYDLGLNKGKVGDIIGKSKTIFIDCPIEVLI 265

Query: 232 EQIEFFCRFHVTKEEVMSLLLLGMEIFEFDLKSP-FCVVGLLRHFGLDEKDLNSIIEKYP 56
           ++ E+FCRF V+K +V  LLL   E+  FDL++P   V G+L HFG + ++L  +I KYP
Sbjct: 266 KKTEYFCRFGVSKVDVGMLLLQKPELLCFDLETPLISVKGILEHFGFNVEELEVVIHKYP 325

Query: 55  YVFGRNRLTNLPHVMRAL 2
           +V GRN++ NLPHVMRA+
Sbjct: 326 HVMGRNKMANLPHVMRAM 343


>ref|NP_191599.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|7287988|emb|CAB81826.1|
           putative protein [Arabidopsis thaliana]
           gi|332646534|gb|AEE80055.1| Mitochondrial transcription
           termination factor family protein [Arabidopsis thaliana]
          Length = 558

 Score =  138 bits (347), Expect = 5e-31
 Identities = 64/138 (46%), Positives = 97/138 (70%), Gaps = 1/138 (0%)
 Frame = -1

Query: 412 KRIVVDFDLISDVEGSVDAWIEVCGKIQMFYNLGCRKLDIWEMMGRSKSILIEYPEEILA 233
           KR+  +FD     E +VD+W+ V  KI++FY+LGC   ++WE+M R+KS+ +EY EE L 
Sbjct: 209 KRLFDEFDSHHLFEENVDSWLAVSRKIRIFYDLGCENEEMWELMCRNKSLFLEYSEEALM 268

Query: 232 EQIEFFCRFHVTKEEVMSLLLLGMEIFEFDLKSP-FCVVGLLRHFGLDEKDLNSIIEKYP 56
            +  +FCRF V+KE+   L+L    I  FDL+ P   V G+L+HFGL + +++++ +KYP
Sbjct: 269 NKAGYFCRFGVSKEDAALLILRNPAIMNFDLEKPVISVTGMLKHFGLRQDEVDAVAQKYP 328

Query: 55  YVFGRNRLTNLPHVMRAL 2
           YVFGRN+L NLP+V+RA+
Sbjct: 329 YVFGRNQLKNLPYVLRAI 346


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