BLASTX nr result

ID: Atractylodes21_contig00027880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027880
         (956 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like i...   323   5e-86
emb|CBI15710.3| unnamed protein product [Vitis vinifera]              317   3e-84
ref|XP_004138251.1| PREDICTED: RNA pseudourine synthase 7-like [...   315   8e-84
ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [...   307   3e-81
ref|XP_002321729.1| predicted protein [Populus trichocarpa] gi|2...   304   2e-80

>ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like isoform 2 [Vitis
           vinifera] gi|359491114|ref|XP_002280549.2| PREDICTED:
           RNA pseudourine synthase 7-like isoform 1 [Vitis
           vinifera]
          Length = 386

 Score =  323 bits (827), Expect = 5e-86
 Identities = 158/232 (68%), Positives = 179/232 (77%), Gaps = 2/232 (0%)
 Frame = -3

Query: 954 HDLAPLFPVHRLDRLVSGLLILARSASQADLFRQQIESGTVQKQYIAKVVGEFPEEEQVV 775
           H LAPLFP+HRLDRLVSGLLILARSAS+AD FRQQIE+G VQKQYIAKV G FP++EQVV
Sbjct: 155 HGLAPLFPIHRLDRLVSGLLILARSASKADSFRQQIEAGMVQKQYIAKVTGVFPDDEQVV 214

Query: 774 NMRVNFNAREGRSTAEPGDVDEKGNSSSNGKAACTKFSRICTNGKYSIVSCQPITGRTHQ 595
           N+ VN+NAREGRST E G+    GN+   GK+ACTKF+RI TNG +SIV C+PITGRTHQ
Sbjct: 215 NVNVNYNAREGRSTVEVGNC--CGNTPLKGKSACTKFTRISTNGTHSIVLCEPITGRTHQ 272

Query: 594 IRVHLQSTGHPIANDTLYLSDFVDGGSRRAFTAHKGAVKSSHSLKSESNDNCISE--SQE 421
           IRVHLQ TGHPIAND LYLS+F    S +  +A + A  S  SL S S  +C+ E     
Sbjct: 273 IRVHLQYTGHPIANDMLYLSEFSVDRSTKGLSADRAAANSGCSLPSSSPKSCVDEYCDDN 332

Query: 420 FIEDFGIDPMCTNCPNLAPIGYDGSEEGLWLHCVRYSGPDWVYECPYPEWTS 265
              DF IDPMCTNCPNL P GYD  EEGLWLHC+RY GPDWVYECP+PEW S
Sbjct: 333 STVDFSIDPMCTNCPNLTPKGYDEDEEGLWLHCIRYCGPDWVYECPHPEWAS 384


>emb|CBI15710.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  317 bits (811), Expect = 3e-84
 Identities = 156/232 (67%), Positives = 177/232 (76%), Gaps = 2/232 (0%)
 Frame = -3

Query: 954 HDLAPLFPVHRLDRLVSGLLILARSASQADLFRQQIESGTVQKQYIAKVVGEFPEEEQVV 775
           H LAPLFP+HRLDRLVSGLLILARSAS+AD FRQQIE+G VQKQYIAKV G FP++EQVV
Sbjct: 145 HGLAPLFPIHRLDRLVSGLLILARSASKADSFRQQIEAGMVQKQYIAKVTGVFPDDEQVV 204

Query: 774 NMRVNFNAREGRSTAEPGDVDEKGNSSSNGKAACTKFSRICTNGKYSIVSCQPITGRTHQ 595
           N+ VN+NAREGRST      +  GN+   GK+ACTKF+RI TNG +SIV C+PITGRTHQ
Sbjct: 205 NVNVNYNAREGRSTVG----NCCGNTPLKGKSACTKFTRISTNGTHSIVLCEPITGRTHQ 260

Query: 594 IRVHLQSTGHPIANDTLYLSDFVDGGSRRAFTAHKGAVKSSHSLKSESNDNCISE--SQE 421
           IRVHLQ TGHPIAND LYLS+F    S +  +A + A  S  SL S S  +C+ E     
Sbjct: 261 IRVHLQYTGHPIANDMLYLSEFSVDRSTKGLSADRAAANSGCSLPSSSPKSCVDEYCDDN 320

Query: 420 FIEDFGIDPMCTNCPNLAPIGYDGSEEGLWLHCVRYSGPDWVYECPYPEWTS 265
              DF IDPMCTNCPNL P GYD  EEGLWLHC+RY GPDWVYECP+PEW S
Sbjct: 321 STVDFSIDPMCTNCPNLTPKGYDEDEEGLWLHCIRYCGPDWVYECPHPEWAS 372


>ref|XP_004138251.1| PREDICTED: RNA pseudourine synthase 7-like [Cucumis sativus]
           gi|449501468|ref|XP_004161375.1| PREDICTED: RNA
           pseudourine synthase 7-like [Cucumis sativus]
          Length = 393

 Score =  315 bits (808), Expect = 8e-84
 Identities = 156/232 (67%), Positives = 185/232 (79%), Gaps = 1/232 (0%)
 Frame = -3

Query: 954 HDLAPLFPVHRLDRLVSGLLILARSASQADLFRQQIESGTVQKQYIAKVVGEFPEEEQVV 775
           H LAPLFP+HRLDRLVSGLLILAR+AS+ADLFRQQIESG V+KQYIA+VVG FPEEEQVV
Sbjct: 163 HGLAPLFPIHRLDRLVSGLLILARNASKADLFRQQIESGLVKKQYIARVVGVFPEEEQVV 222

Query: 774 NMRVNFNAREGRSTAEPGDVDEKGNSSSNGKAACTKFSRICTNGKYSIVSCQPITGRTHQ 595
           +  +N+N REGRSTAE   VD   ++ + GKAA TKF+RI ++G +SIVSC+PITGRTHQ
Sbjct: 223 DANINYNPREGRSTAEM--VDSSTDTRTKGKAAQTKFTRISSDGVHSIVSCEPITGRTHQ 280

Query: 594 IRVHLQSTGHPIANDTLYLSDFVDGGSRRAFTAHKGAVKSSHSLKSESNDNCISESQE-F 418
           IRVHLQ TG+PIAND LYL+    G S +  TA + A  S  S   +  ++C +  +E +
Sbjct: 281 IRVHLQYTGYPIANDALYLTKEASGRSVQKTTADRAAAISFCSPARDVQEDCANACKENW 340

Query: 417 IEDFGIDPMCTNCPNLAPIGYDGSEEGLWLHCVRYSGPDWVYECPYPEWTSL 262
            EDFGIDPMCTNCPNLAP GY+G EEGLWLHCV+YSGP W+YECPYPEW SL
Sbjct: 341 SEDFGIDPMCTNCPNLAPKGYEGEEEGLWLHCVQYSGPGWIYECPYPEWASL 392


>ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223550244|gb|EEF51731.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 385

 Score =  307 bits (786), Expect = 3e-81
 Identities = 153/232 (65%), Positives = 179/232 (77%), Gaps = 1/232 (0%)
 Frame = -3

Query: 954 HDLAPLFPVHRLDRLVSGLLILARSASQADLFRQQIESGTVQKQYIAKVVGEFPEEEQVV 775
           H+LAPLFPVHRLDRLVSGLLILAR+A +ADLFRQ+IE+G VQKQY+AKVVG FPE+EQVV
Sbjct: 157 HNLAPLFPVHRLDRLVSGLLILARNALKADLFRQEIEAGMVQKQYVAKVVGVFPEDEQVV 216

Query: 774 NMRVNFNAREGRSTAEPGDVDEKGNSSSNGKAACTKFSRICTNGKYSIVSCQPITGRTHQ 595
            + +N+NAREGRSTAE G  +   +S   GK ACTKF+RI TNG +SIV C+PITGRTHQ
Sbjct: 217 GVNINYNAREGRSTAEVG--NSCVDSPPKGKTACTKFTRISTNGTHSIVLCKPITGRTHQ 274

Query: 594 IRVHLQSTGHPIANDTLYLSDFVDGGSRRAFTAHKGAVKSSHSLKSESNDNCISESQE-F 418
           IRVHLQ TGHPIAND LYLS+     S    +A + A  SS+ +  +  D C    +E  
Sbjct: 275 IRVHLQYTGHPIANDFLYLSEHAASRSAEGMSADRAACSSSYCVTPQ--DFCSDTHEENS 332

Query: 417 IEDFGIDPMCTNCPNLAPIGYDGSEEGLWLHCVRYSGPDWVYECPYPEWTSL 262
           ++DF IDPMCTNCPNLAP GYD  EE LWLHCV+YSGP WVYECPYP+W  L
Sbjct: 333 VQDFSIDPMCTNCPNLAPKGYDVYEECLWLHCVQYSGPGWVYECPYPDWAIL 384


>ref|XP_002321729.1| predicted protein [Populus trichocarpa] gi|222868725|gb|EEF05856.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score =  304 bits (778), Expect = 2e-80
 Identities = 150/228 (65%), Positives = 176/228 (77%)
 Frame = -3

Query: 954 HDLAPLFPVHRLDRLVSGLLILARSASQADLFRQQIESGTVQKQYIAKVVGEFPEEEQVV 775
           H LAPLFPVHRLDRLVSGLLILAR+A++ADLFRQ+IE+G VQKQY+AKV+G FPE+EQ+V
Sbjct: 160 HGLAPLFPVHRLDRLVSGLLILARNATRADLFRQEIEAGKVQKQYVAKVIGVFPEDEQIV 219

Query: 774 NMRVNFNAREGRSTAEPGDVDEKGNSSSNGKAACTKFSRICTNGKYSIVSCQPITGRTHQ 595
           ++ VN+NAREGRST E G+  +   S   GK ACTKF+RI TNG +SIV C+PITGRTHQ
Sbjct: 220 DVNVNYNAREGRSTVEVGNSCD--GSPIKGKTACTKFTRIGTNGIHSIVLCKPITGRTHQ 277

Query: 594 IRVHLQSTGHPIANDTLYLSDFVDGGSRRAFTAHKGAVKSSHSLKSESNDNCISESQEFI 415
           IRVHLQ TGHPIAND LYLS+ V   S     A + A   ++ L  E+N +   E     
Sbjct: 278 IRVHLQYTGHPIANDILYLSENVTNRSSEGVNADRAAHSPNNCLVPENNSSDKYEDST-E 336

Query: 414 EDFGIDPMCTNCPNLAPIGYDGSEEGLWLHCVRYSGPDWVYECPYPEW 271
           EDF IDPMCTNCPNL P GYDG EEGLWLHCV+YSG  WVY+CPYP+W
Sbjct: 337 EDFDIDPMCTNCPNLVPKGYDGHEEGLWLHCVQYSGSGWVYQCPYPDW 384


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