BLASTX nr result

ID: Atractylodes21_contig00027831 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027831
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308384.1| dicer-like protein [Populus trichocarpa] gi|...   102   1e-19
ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis...    98   2e-18
ref|XP_004162460.1| PREDICTED: LOW QUALITY PROTEIN: dicer-like p...    97   4e-18
ref|XP_004152191.1| PREDICTED: uncharacterized protein LOC101212...    97   4e-18
ref|XP_004146733.1| PREDICTED: dicer-like protein 4-like [Cucumi...    97   4e-18

>ref|XP_002308384.1| dicer-like protein [Populus trichocarpa] gi|222854360|gb|EEE91907.1|
            dicer-like protein [Populus trichocarpa]
          Length = 1588

 Score =  102 bits (253), Expect = 1e-19
 Identities = 50/86 (58%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
 Frame = -2

Query: 462  PGPVKL-TARSCLYEICAKSHWKRPVFACCNEKGPSNLKSFTYKAIVEMKEGSRSRIVVE 286
            P  V L TARS L EICA + WK P F CC E+GPS+LKSFTYK +VE++E     +  E
Sbjct: 1500 PSKVDLGTARSRLREICAANSWKPPSFECCTEEGPSHLKSFTYKVVVEIEEA--PEMSFE 1557

Query: 285  CIGKPQLNKKSAADSAAEGVLWYLVH 208
            C+G PQ+ KK+AA+ AAEG LWYL H
Sbjct: 1558 CVGSPQMKKKAAAEDAAEGALWYLKH 1583


>ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis]
            gi|223537239|gb|EEF38871.1| Ribonuclease III, putative
            [Ricinus communis]
          Length = 1633

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 44/82 (53%), Positives = 63/82 (76%)
 Frame = -2

Query: 444  TARSCLYEICAKSHWKRPVFACCNEKGPSNLKSFTYKAIVEMKEGSRSRIVVECIGKPQL 265
            +A+S L++ICA + WK P+F CC E+GPS+LKSF+YK IVE++  +   +++EC G P+ 
Sbjct: 1550 SAKSRLHDICAANCWKPPLFECCYEEGPSHLKSFSYKVIVEIE--AAPDMILECFGAPRE 1607

Query: 264  NKKSAADSAAEGVLWYLVHLGY 199
             KK+AA+ AAEG LWYL H+GY
Sbjct: 1608 KKKAAAEHAAEGALWYLQHVGY 1629


>ref|XP_004162460.1| PREDICTED: LOW QUALITY PROTEIN: dicer-like protein 4-like [Cucumis
            sativus]
          Length = 1228

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 46/84 (54%), Positives = 58/84 (69%)
 Frame = -2

Query: 450  KLTARSCLYEICAKSHWKRPVFACCNEKGPSNLKSFTYKAIVEMKEGSRSRIVVECIGKP 271
            K TARS LYE+CA +HW RP F C NE+GPS+LK FTYK ++E++E   +  + E  G P
Sbjct: 1136 KTTARSRLYEVCAANHWNRPSFDCMNEEGPSHLKMFTYKVVLEIEEAPDT--IFEFFGAP 1193

Query: 270  QLNKKSAADSAAEGVLWYLVHLGY 199
             L KK+AA+ AAE  LWYL   GY
Sbjct: 1194 HLKKKAAAEHAAEAALWYLEKGGY 1217


>ref|XP_004152191.1| PREDICTED: uncharacterized protein LOC101212514 [Cucumis sativus]
           gi|449528319|ref|XP_004171152.1| PREDICTED:
           uncharacterized protein LOC101230392 [Cucumis sativus]
          Length = 227

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 45/86 (52%), Positives = 57/86 (66%)
 Frame = -2

Query: 456 PVKLTARSCLYEICAKSHWKRPVFACCNEKGPSNLKSFTYKAIVEMKEGSRSRIVVECIG 277
           P K  A+S L+EIC  +HW+ P+F CC E+GPS+ K + +K  +EMK    +  VVEC G
Sbjct: 140 PEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYRFKVRIEMKGDCEA--VVECYG 197

Query: 276 KPQLNKKSAADSAAEGVLWYLVHLGY 199
             Q  KK AA+ AAEG LWYL HLGY
Sbjct: 198 NLQTRKKVAAEHAAEGALWYLNHLGY 223


>ref|XP_004146733.1| PREDICTED: dicer-like protein 4-like [Cucumis sativus]
          Length = 1657

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 46/84 (54%), Positives = 58/84 (69%)
 Frame = -2

Query: 450  KLTARSCLYEICAKSHWKRPVFACCNEKGPSNLKSFTYKAIVEMKEGSRSRIVVECIGKP 271
            K TARS LYE+CA +HW RP F C NE+GPS+LK FTYK ++E++E   +  + E  G P
Sbjct: 1565 KTTARSRLYEVCAANHWNRPSFDCMNEEGPSHLKMFTYKVVLEIEEAPDT--IFEFFGAP 1622

Query: 270  QLNKKSAADSAAEGVLWYLVHLGY 199
             L KK+AA+ AAE  LWYL   GY
Sbjct: 1623 HLKKKAAAEHAAEAALWYLEKGGY 1646


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