BLASTX nr result

ID: Atractylodes21_contig00027805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027805
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633963.1| PREDICTED: golgin candidate 4-like isoform 2...   127   3e-27
emb|CBI40445.3| unnamed protein product [Vitis vinifera]              127   3e-27
ref|XP_002279017.1| PREDICTED: golgin candidate 4-like isoform 1...   127   3e-27
ref|XP_002320829.1| predicted protein [Populus trichocarpa] gi|2...   125   1e-26
ref|XP_002511931.1| Structural maintenance of chromosome 1 prote...   120   2e-25

>ref|XP_003633963.1| PREDICTED: golgin candidate 4-like isoform 2 [Vitis vinifera]
          Length = 776

 Score =  127 bits (319), Expect = 3e-27
 Identities = 92/202 (45%), Positives = 109/202 (53%), Gaps = 26/202 (12%)
 Frame = +1

Query: 220 MWSTTLANLKENLNKIALXXXXXXXXXXXXXXRLSEIXXXXXXXXXXXXXXXXXGRSVSP 399
           MWST +ANLKENLNKIAL                 +I                     + 
Sbjct: 1   MWST-IANLKENLNKIALDVHDDDDEEL-------QIHAPVVAAEDPSVSDRRFSHKYAH 52

Query: 400 IANGLDSTSNSEIEQYKAEIKRLQESEAQIKALSVNYAALLKEREDRISRLNDENSSLKK 579
            +NG+DS  NSEIEQYKAEIKRLQESEA+IKALS+NYAALLK++ED+IS+L+ EN SLK 
Sbjct: 53  -SNGIDSAYNSEIEQYKAEIKRLQESEAEIKALSINYAALLKDKEDQISKLSKENGSLKH 111

Query: 580 NLD-------ASRSETLKTSANSPSGSK-----------------KNRSFGKRVQNGVTS 687
           NLD       ASRSE  +TS NS    K                 K RS G ++ NGV  
Sbjct: 112 NLDSTNAVLSASRSENSRTSTNSLHALKGSGDQSPSRQHKLTAQVKGRSTGNQMHNGVV- 170

Query: 688 KEDAPGNG--HSFQPAMIQPKM 747
           K+D   NG  H+ QP   Q KM
Sbjct: 171 KQDGLSNGIAHAVQPDAAQSKM 192


>emb|CBI40445.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  127 bits (319), Expect = 3e-27
 Identities = 92/202 (45%), Positives = 109/202 (53%), Gaps = 26/202 (12%)
 Frame = +1

Query: 220 MWSTTLANLKENLNKIALXXXXXXXXXXXXXXRLSEIXXXXXXXXXXXXXXXXXGRSVSP 399
           MWST +ANLKENLNKIAL                 +I                     + 
Sbjct: 1   MWST-IANLKENLNKIALDVHDDDDEEL-------QIHAPVVAAEDPSVSDRRFSHKYAH 52

Query: 400 IANGLDSTSNSEIEQYKAEIKRLQESEAQIKALSVNYAALLKEREDRISRLNDENSSLKK 579
            +NG+DS  NSEIEQYKAEIKRLQESEA+IKALS+NYAALLK++ED+IS+L+ EN SLK 
Sbjct: 53  -SNGIDSAYNSEIEQYKAEIKRLQESEAEIKALSINYAALLKDKEDQISKLSKENGSLKH 111

Query: 580 NLD-------ASRSETLKTSANSPSGSK-----------------KNRSFGKRVQNGVTS 687
           NLD       ASRSE  +TS NS    K                 K RS G ++ NGV  
Sbjct: 112 NLDSTNAVLSASRSENSRTSTNSLHALKGSGDQSPSRQHKLTAQVKGRSTGNQMHNGVV- 170

Query: 688 KEDAPGNG--HSFQPAMIQPKM 747
           K+D   NG  H+ QP   Q KM
Sbjct: 171 KQDGLSNGIAHAVQPDAAQSKM 192


>ref|XP_002279017.1| PREDICTED: golgin candidate 4-like isoform 1 [Vitis vinifera]
          Length = 790

 Score =  127 bits (319), Expect = 3e-27
 Identities = 92/202 (45%), Positives = 109/202 (53%), Gaps = 26/202 (12%)
 Frame = +1

Query: 220 MWSTTLANLKENLNKIALXXXXXXXXXXXXXXRLSEIXXXXXXXXXXXXXXXXXGRSVSP 399
           MWST +ANLKENLNKIAL                 +I                     + 
Sbjct: 1   MWST-IANLKENLNKIALDVHDDDDEEL-------QIHAPVVAAEDPSVSDRRFSHKYAH 52

Query: 400 IANGLDSTSNSEIEQYKAEIKRLQESEAQIKALSVNYAALLKEREDRISRLNDENSSLKK 579
            +NG+DS  NSEIEQYKAEIKRLQESEA+IKALS+NYAALLK++ED+IS+L+ EN SLK 
Sbjct: 53  -SNGIDSAYNSEIEQYKAEIKRLQESEAEIKALSINYAALLKDKEDQISKLSKENGSLKH 111

Query: 580 NLD-------ASRSETLKTSANSPSGSK-----------------KNRSFGKRVQNGVTS 687
           NLD       ASRSE  +TS NS    K                 K RS G ++ NGV  
Sbjct: 112 NLDSTNAVLSASRSENSRTSTNSLHALKGSGDQSPSRQHKLTAQVKGRSTGNQMHNGVV- 170

Query: 688 KEDAPGNG--HSFQPAMIQPKM 747
           K+D   NG  H+ QP   Q KM
Sbjct: 171 KQDGLSNGIAHAVQPDAAQSKM 192


>ref|XP_002320829.1| predicted protein [Populus trichocarpa] gi|222861602|gb|EEE99144.1|
           predicted protein [Populus trichocarpa]
          Length = 729

 Score =  125 bits (313), Expect = 1e-26
 Identities = 91/201 (45%), Positives = 108/201 (53%), Gaps = 25/201 (12%)
 Frame = +1

Query: 220 MWSTTLANLKENLNKIALXXXXXXXXXXXXXXRLSEIXXXXXXXXXXXXXXXXXGRSVSP 399
           MWS+ +ANLK+NL KIAL                S                    +SVSP
Sbjct: 2   MWSS-IANLKQNLEKIALDVHDDDEDLEI---HASTNGYDSSVSDRRNSHRFAHSKSVSP 57

Query: 400 --IANGLDSTSNSEIEQYKAEIKRLQESEAQIKALSVNYAALLKEREDRISRLNDENSSL 573
              ANG DS  N EIEQYKA+IKR QESEA+IKALSVNYAA+LKE+ED+ISRLN EN SL
Sbjct: 58  SPTANGNDSPYNFEIEQYKAQIKRHQESEAEIKALSVNYAAILKEKEDQISRLNQENGSL 117

Query: 574 KKNLD-------ASRSETLKTSANS--------------PSGSKKNRSFGKRVQNGVTSK 690
           K+NLD        SR+E  + S +S              P+   KNR  G ++QN V  K
Sbjct: 118 KQNLDVTKEALNVSRNEHRRASTSSIKESGDQSPKRPHRPATQAKNRG-GNQIQNRVFPK 176

Query: 691 EDAPGNG--HSFQPAMIQPKM 747
            D  GNG  H   P +IQ KM
Sbjct: 177 HDGMGNGILHDVHPDVIQSKM 197


>ref|XP_002511931.1| Structural maintenance of chromosome 1 protein, putative [Ricinus
           communis] gi|223549111|gb|EEF50600.1| Structural
           maintenance of chromosome 1 protein, putative [Ricinus
           communis]
          Length = 755

 Score =  120 bits (302), Expect = 2e-25
 Identities = 71/125 (56%), Positives = 86/125 (68%), Gaps = 24/125 (19%)
 Frame = +1

Query: 394 SPIANGLDSTSNSEIEQYKAEIKRLQESEAQIKALSVNYAALLKEREDRISRLNDENSSL 573
           SPIANG+DS+ +SEIEQYKAEI+RLQESE++IKALSVNYAALLKE+ED+ISRLN EN SL
Sbjct: 57  SPIANGIDSSFHSEIEQYKAEIRRLQESESEIKALSVNYAALLKEKEDQISRLNQENGSL 116

Query: 574 KKNLDA-------SRSETLKTSANSPSGSK-----------------KNRSFGKRVQNGV 681
           K NLDA       SRSE  K S N+    K                 K+R+ G ++QNGV
Sbjct: 117 KHNLDATEEALNVSRSENPKASTNNTHVIKGAVDQSPNQQHKSATQAKSRNVGNQMQNGV 176

Query: 682 TSKED 696
            SK++
Sbjct: 177 FSKQE 181


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