BLASTX nr result

ID: Atractylodes21_contig00027793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027793
         (1283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB59355.1| peroxisome biogenesis factor 13 [Nicotiana tabacum]    145   2e-32
ref|XP_002524578.1| nucleic acid binding protein, putative [Rici...   139   1e-30
ref|XP_004152142.1| PREDICTED: uncharacterized protein LOC101221...   138   3e-30
ref|XP_003537925.1| PREDICTED: uncharacterized protein LOC100820...   138   3e-30
ref|XP_003597539.1| Peroxisome biogenesis factor [Medicago trunc...   138   3e-30

>gb|ACB59355.1| peroxisome biogenesis factor 13 [Nicotiana tabacum]
          Length = 299

 Score =  145 bits (366), Expect = 2e-32
 Identities = 73/102 (71%), Positives = 78/102 (76%)
 Frame = -2

Query: 709 DQDPNNPFGAPSSPPGFWISLMRVMHGVVTFFGRVAVLIDQNTQAFHMFMSALXXXXXXX 530
           DQDPNNPFGAPSSPPGFW+S M VM GVVTFFGRVA+LIDQNTQAFHM MSA+       
Sbjct: 175 DQDPNNPFGAPSSPPGFWVSFMHVMQGVVTFFGRVAMLIDQNTQAFHMSMSAM------- 227

Query: 529 XXXXXXXXXXXXQLFDRSGMLYGELARFVFRLLGVRTKPNKI 404
                       QLFDRSGMLYGELARFV RLLGV+TKPNK+
Sbjct: 228 -----------LQLFDRSGMLYGELARFVLRLLGVKTKPNKV 258



 Score =  113 bits (283), Expect = 9e-23
 Identities = 55/80 (68%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
 Frame = -2

Query: 1228 MANNNSQQSESTPPPKPWERAGSSTGPAPFKPSSPGSTSDVVEASGTARPGEIVPT-NDA 1052
            M N   Q S ++PPPKPWERAGSS+GP PFKP S G+TSDVVEASGTARPGEIV T N  
Sbjct: 1    MDNGPPQPSGNSPPPKPWERAGSSSGPTPFKPPSSGNTSDVVEASGTARPGEIVSTANRN 60

Query: 1051 STINTNALGRPVPSRPWVQQ 992
            +T+N + L RPVP RPW QQ
Sbjct: 61   TTVNNSTLARPVPPRPWEQQ 80


>ref|XP_002524578.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223536131|gb|EEF37786.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 313

 Score =  139 bits (351), Expect = 1e-30
 Identities = 66/102 (64%), Positives = 78/102 (76%)
 Frame = -2

Query: 709 DQDPNNPFGAPSSPPGFWISLMRVMHGVVTFFGRVAVLIDQNTQAFHMFMSALXXXXXXX 530
           DQDPNNP+GAPSSPPGFWIS +RVM GVV FFGR+++LIDQNTQAFHMFM+A+       
Sbjct: 188 DQDPNNPYGAPSSPPGFWISFLRVMQGVVNFFGRISILIDQNTQAFHMFMTAM------- 240

Query: 529 XXXXXXXXXXXXQLFDRSGMLYGELARFVFRLLGVRTKPNKI 404
                       QLFDR+G+LYGELARFV RLLG++TKP K+
Sbjct: 241 -----------LQLFDRTGLLYGELARFVLRLLGIKTKPRKV 271



 Score =  107 bits (267), Expect = 7e-21
 Identities = 52/71 (73%), Positives = 59/71 (83%), Gaps = 3/71 (4%)
 Frame = -2

Query: 1195 TPPPKPWERAG-SSTGPAPFKPSSPGSTSDVVEASGTARPGEIVPTNDASTI--NTNALG 1025
            +PP KPWER+G SS+GP PFKP +PGSTSDVVEASGTARPGEIVP  + +T   NTN LG
Sbjct: 25   SPPAKPWERSGTSSSGPTPFKPPTPGSTSDVVEASGTARPGEIVPAANRTTAVNNTNTLG 84

Query: 1024 RPVPSRPWVQQ 992
            RPVP+RPW QQ
Sbjct: 85   RPVPTRPWEQQ 95


>ref|XP_004152142.1| PREDICTED: uncharacterized protein LOC101221260 [Cucumis sativus]
           gi|449515057|ref|XP_004164566.1| PREDICTED:
           uncharacterized LOC101221260 [Cucumis sativus]
          Length = 298

 Score =  138 bits (348), Expect = 3e-30
 Identities = 66/101 (65%), Positives = 77/101 (76%)
 Frame = -2

Query: 706 QDPNNPFGAPSSPPGFWISLMRVMHGVVTFFGRVAVLIDQNTQAFHMFMSALXXXXXXXX 527
           QDPN+P+G PSSPPGFW+S +RVMHGVV FFGR+++LIDQNTQAFHMFM+AL        
Sbjct: 175 QDPNDPYGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTAL-------- 226

Query: 526 XXXXXXXXXXXQLFDRSGMLYGELARFVFRLLGVRTKPNKI 404
                      QLFDRSGMLYGELARFV RLLG++TKP K+
Sbjct: 227 ----------LQLFDRSGMLYGELARFVLRLLGIKTKPRKV 257



 Score =  108 bits (271), Expect = 2e-21
 Identities = 51/79 (64%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
 Frame = -2

Query: 1228 MANNNSQQSESTPPPKPWERAGSSTGPAPFKPSSPGSTSDVVEASGTARPGEIVPTND-A 1052
            M +   Q S S PPPKPWERAG S+G APF+P S G+TSDVVEASGTA+PGEIV ++D  
Sbjct: 1    MDSKPPQPSASNPPPKPWERAGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDRT 60

Query: 1051 STINTNALGRPVPSRPWVQ 995
            + +N N+LGRPVP+RPW Q
Sbjct: 61   AAVNRNSLGRPVPTRPWEQ 79


>ref|XP_003537925.1| PREDICTED: uncharacterized protein LOC100820349 [Glycine max]
          Length = 280

 Score =  138 bits (347), Expect = 3e-30
 Identities = 68/101 (67%), Positives = 76/101 (75%)
 Frame = -2

Query: 706 QDPNNPFGAPSSPPGFWISLMRVMHGVVTFFGRVAVLIDQNTQAFHMFMSALXXXXXXXX 527
           +DPNNP+G PSSPPGFWIS MRVM GVV FFGR+++LIDQNTQAFHMFM+AL        
Sbjct: 154 EDPNNPYGVPSSPPGFWISFMRVMQGVVNFFGRISMLIDQNTQAFHMFMTAL-------- 205

Query: 526 XXXXXXXXXXXQLFDRSGMLYGELARFVFRLLGVRTKPNKI 404
                      QLFDRSG+LYGELARFV RLLG+RTKP KI
Sbjct: 206 ----------LQLFDRSGVLYGELARFVLRLLGIRTKPKKI 236



 Score =  112 bits (279), Expect = 3e-22
 Identities = 51/68 (75%), Positives = 59/68 (86%), Gaps = 1/68 (1%)
 Frame = -2

Query: 1189 PPKPWERAGSSTGPAPFKPSSPGSTSDVVEASGTARPGEIVPTND-ASTINTNALGRPVP 1013
            PPKPWE+A SS+GPAPFKP S GSTSDVVEASGTA+PGEIVP +D  +T+N NALGRP+P
Sbjct: 8    PPKPWEKAASSSGPAPFKPPSAGSTSDVVEASGTAKPGEIVPASDKTATVNRNALGRPLP 67

Query: 1012 SRPWVQQN 989
            +RPW Q N
Sbjct: 68   TRPWEQNN 75


>ref|XP_003597539.1| Peroxisome biogenesis factor [Medicago truncatula]
           gi|355486587|gb|AES67790.1| Peroxisome biogenesis factor
           [Medicago truncatula]
          Length = 316

 Score =  138 bits (347), Expect = 3e-30
 Identities = 66/102 (64%), Positives = 78/102 (76%)
 Frame = -2

Query: 709 DQDPNNPFGAPSSPPGFWISLMRVMHGVVTFFGRVAVLIDQNTQAFHMFMSALXXXXXXX 530
           +QDPNNP+GAP SPPGFWIS+MRVM GVV FFGR+++LIDQNTQAFH+FM+A+       
Sbjct: 181 EQDPNNPYGAPPSPPGFWISVMRVMQGVVNFFGRISILIDQNTQAFHLFMTAM------- 233

Query: 529 XXXXXXXXXXXXQLFDRSGMLYGELARFVFRLLGVRTKPNKI 404
                       QLFDRSGMLYGELARFV RLLG++TK NK+
Sbjct: 234 -----------LQLFDRSGMLYGELARFVLRLLGIKTKANKV 264



 Score =  112 bits (281), Expect = 2e-22
 Identities = 54/76 (71%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
 Frame = -2

Query: 1219 NNSQQSESTPPPKPWERAGSSTGPAPFKPSSPGSTSDVVEASGTARPGEIVPTNDAS-TI 1043
            +N Q S S PPPKPWERAGSS+GPAPF+P S GSTSDVVEASGTA+PGEIV   D S  +
Sbjct: 3    SNPQPSASNPPPKPWERAGSSSGPAPFRPPSGGSTSDVVEASGTAKPGEIVTAADRSAAV 62

Query: 1042 NTNALGRPVPSRPWVQ 995
            N N L RPVP+RPW Q
Sbjct: 63   NRNTLARPVPTRPWEQ 78


Top