BLASTX nr result

ID: Atractylodes21_contig00027787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027787
         (826 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEZ03720.1| hypothetical protein (mitochondrion) [Oryza sativ...    60   4e-12
gb|AAR91193.1| hypothetical protein (mitochondrion) [Zea mays]         60   4e-11
ref|YP_003587247.1| cytochrome c biogenesis FN [Citrullus lanatu...    52   1e-09
ref|YP_173394.1| cytochrome c maturation protein CcmFN [Nicotian...    49   4e-09
ref|YP_006291807.1| ccmFN gene product (mitochondrion) [Daucus c...    49   5e-09

>gb|AEZ03720.1| hypothetical protein (mitochondrion) [Oryza sativa Indica Group]
           gi|374277714|gb|AEZ03819.1| hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group]
          Length = 154

 Score = 59.7 bits (143), Expect(2) = 4e-12
 Identities = 29/41 (70%), Positives = 31/41 (75%)
 Frame = +2

Query: 542 PWAWNPEIAKIKIRIGSWSWSETTVFTLAIQQRSEVVVSFF 664
           P   N    KI+IRIGSWSWSETTVF  A+QQR EVVVSFF
Sbjct: 2   PTVKNNRHVKIQIRIGSWSWSETTVFAPAVQQRGEVVVSFF 42



 Score = 37.7 bits (86), Expect(2) = 4e-12
 Identities = 18/27 (66%), Positives = 20/27 (74%)
 Frame = +1

Query: 658 FLPLRKTCFTCPLPMSTSALVQNEEKA 738
           F PLR T F C LP+S SA VQ+EEKA
Sbjct: 41  FFPLRTTRFACSLPVSISAPVQSEEKA 67


>gb|AAR91193.1| hypothetical protein (mitochondrion) [Zea mays]
          Length = 152

 Score = 60.5 bits (145), Expect(2) = 4e-11
 Identities = 29/41 (70%), Positives = 32/41 (78%)
 Frame = +2

Query: 542 PWAWNPEIAKIKIRIGSWSWSETTVFTLAIQQRSEVVVSFF 664
           P   N +  KI+IRIGSWSWSETTVF  A+QQR EVVVSFF
Sbjct: 2   PTVKNNQHVKIQIRIGSWSWSETTVFAPAVQQRGEVVVSFF 42



 Score = 33.9 bits (76), Expect(2) = 4e-11
 Identities = 18/28 (64%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +1

Query: 658 FLPLRKTC-FTCPLPMSTSALVQNEEKA 738
           F PLR T  F C LP+S SA VQ+EEKA
Sbjct: 41  FFPLRTTTRFACSLPVSISAPVQSEEKA 68


>ref|YP_003587247.1| cytochrome c biogenesis FN [Citrullus lanatus]
           gi|259156766|gb|ACV96628.1| cytochrome c biogenesis FN
           [Citrullus lanatus]
          Length = 577

 Score = 52.0 bits (123), Expect(2) = 1e-09
 Identities = 28/42 (66%), Positives = 29/42 (69%)
 Frame = -2

Query: 663 KKETTTSLLC*IASVNTVVSDQDHEPIRILILAISGFHAHGL 538
           KKETTTSLLC  A  NTVVSDQD EPIRI IL    F   G+
Sbjct: 390 KKETTTSLLCWTAGANTVVSDQDQEPIRIWILICRCFLTVGI 431



 Score = 37.0 bits (84), Expect(2) = 1e-09
 Identities = 23/57 (40%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
 Frame = -3

Query: 824 KFKHVGTKGNPAXXXXXXXXXXXXXXXXXXXXXF-WTRALVDMGRGQVKHVFRNGRK 657
           KFKHVG K  PA                       WT  LVD GR Q K V RNG+K
Sbjct: 335 KFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFSSLWTGGLVDTGREQAKRVVRNGKK 391


>ref|YP_173394.1| cytochrome c maturation protein CcmFN [Nicotiana tabacum]
          Length = 574

 Score = 48.9 bits (115), Expect(2) = 4e-09
 Identities = 26/42 (61%), Positives = 28/42 (66%)
 Frame = -2

Query: 663 KKETTTSLLC*IASVNTVVSDQDHEPIRILILAISGFHAHGL 538
           KK+TTTS LC  A  NTVVSDQD EPIRI IL    F   G+
Sbjct: 387 KKDTTTSPLCWTAGANTVVSDQDQEPIRIWILTCRWFLTVGI 428



 Score = 38.5 bits (88), Expect(2) = 4e-09
 Identities = 24/57 (42%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = -3

Query: 824 KFKHVGTKGNPAXXXXXXXXXXXXXXXXXXXXXF-WTRALVDMGRGQVKHVFRNGRK 657
           KFKHVG K  PA                       WT ALVD GR Q K V RNG+K
Sbjct: 332 KFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFSSLWTGALVDTGREQAKRVVRNGKK 388


>ref|YP_006291807.1| ccmFN gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|374081939|gb|AEY81131.1| CcmFN (mitochondrion)
           [Daucus carota subsp. sativus]
          Length = 579

 Score = 48.9 bits (115), Expect(2) = 5e-09
 Identities = 26/42 (61%), Positives = 28/42 (66%)
 Frame = -2

Query: 663 KKETTTSLLC*IASVNTVVSDQDHEPIRILILAISGFHAHGL 538
           KK+TTTS LC  A  NTVVSDQD EPIRI IL    F   G+
Sbjct: 392 KKDTTTSPLCWTAGANTVVSDQDQEPIRIWILTCRWFLTVGI 433



 Score = 38.1 bits (87), Expect(2) = 5e-09
 Identities = 24/57 (42%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = -3

Query: 824 KFKHVGTKGNPAXXXXXXXXXXXXXXXXXXXXXF-WTRALVDMGRGQVKHVFRNGRK 657
           KFKHVG K  PA                       WT ALVD GR Q K V RNG+K
Sbjct: 337 KFKHVGEKCYPALLLRSNRSPLMLLRRRFFALSSLWTGALVDTGREQAKRVVRNGKK 393


Top