BLASTX nr result

ID: Atractylodes21_contig00027761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027761
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22212.3| unnamed protein product [Vitis vinifera]               64   2e-08
ref|XP_002323859.1| condensin complex components subunit [Populu...    64   2e-08
ref|XP_003625142.1| Structural maintenance of chromosomes protei...    61   1e-07
ref|XP_003554891.1| PREDICTED: structural maintenance of chromos...    60   1e-07
ref|XP_003543852.1| PREDICTED: structural maintenance of chromos...    60   1e-07

>emb|CBI22212.3| unnamed protein product [Vitis vinifera]
          Length = 1253

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/75 (48%), Positives = 44/75 (58%)
 Frame = +2

Query: 2    QMKEMNPDLDSISE*EILSVC*LHTSFGFVIGYLYSYRQKVSVYNERVDELSLVTNGLDQ 181
            Q+KEMNP+LDSISE                      YR+KVSVYNERV +L++VT   D 
Sbjct: 1040 QLKEMNPNLDSISE----------------------YRRKVSVYNERVQDLNMVTQERDD 1077

Query: 182  TTKQYDE*RKKRQVY 226
              KQYDE +K+R VY
Sbjct: 1078 VKKQYDEWKKRRLVY 1092


>ref|XP_002323859.1| condensin complex components subunit [Populus trichocarpa]
            gi|222866861|gb|EEF03992.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1256

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/77 (48%), Positives = 45/77 (58%)
 Frame = +2

Query: 2    QMKEMNPDLDSISE*EILSVC*LHTSFGFVIGYLYSYRQKVSVYNERVDELSLVTNGLDQ 181
            Q+K+MNP+LDSISE                      YR+KVS YNERV+EL+LVT   D 
Sbjct: 1043 QLKDMNPNLDSISE----------------------YRRKVSSYNERVEELNLVTQQRDD 1080

Query: 182  TTKQYDE*RKKRQVYLF 232
              +QYDE RKKR V+ F
Sbjct: 1081 IKRQYDEWRKKRLVFSF 1097


>ref|XP_003625142.1| Structural maintenance of chromosomes protein [Medicago truncatula]
            gi|355500157|gb|AES81360.1| Structural maintenance of
            chromosomes protein [Medicago truncatula]
          Length = 1017

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
 Frame = +2

Query: 2    QMKEMNPDLDSISE*E-----ILSVC*LHTSFGFVIGYLYSYRQKVSVYNERVDELSLVT 166
            Q+KEMNP+LDSI+E       IL+V     +    + Y   YR+KVS+++ERV+EL+ VT
Sbjct: 774  QLKEMNPNLDSIAEYGLFQFVILTVFLFGVALKCFLIYDIRYRKKVSLHSERVEELNAVT 833

Query: 167  NGLDQTTKQYDE*RKKR 217
               D   KQYDE RKKR
Sbjct: 834  RERDDIKKQYDELRKKR 850


>ref|XP_003554891.1| PREDICTED: structural maintenance of chromosomes protein 4-like
            [Glycine max]
          Length = 1242

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/72 (50%), Positives = 41/72 (56%)
 Frame = +2

Query: 2    QMKEMNPDLDSISE*EILSVC*LHTSFGFVIGYLYSYRQKVSVYNERVDELSLVTNGLDQ 181
            Q+KEMNP+LDSISE                      YR+KVS YNERV+EL+ VT   D 
Sbjct: 1035 QLKEMNPNLDSISE----------------------YRKKVSSYNERVEELNAVTQERDD 1072

Query: 182  TTKQYDE*RKKR 217
              KQYDE RKKR
Sbjct: 1073 IKKQYDEWRKKR 1084


>ref|XP_003543852.1| PREDICTED: structural maintenance of chromosomes protein 4-like
            [Glycine max]
          Length = 1319

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/72 (50%), Positives = 41/72 (56%)
 Frame = +2

Query: 2    QMKEMNPDLDSISE*EILSVC*LHTSFGFVIGYLYSYRQKVSVYNERVDELSLVTNGLDQ 181
            Q+KEMNP+LDSISE                      YR+KVS YNERV+EL+ VT   D 
Sbjct: 1112 QLKEMNPNLDSISE----------------------YRKKVSSYNERVEELNAVTQERDD 1149

Query: 182  TTKQYDE*RKKR 217
              KQYDE RKKR
Sbjct: 1150 IKKQYDEWRKKR 1161


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