BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027744
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
emb|CBI19956.3| unnamed protein product [Vitis vinifera]              150   1e-34
ref|XP_002526177.1| pentatricopeptide repeat-containing protein,...   147   9e-34
ref|XP_003527965.1| PREDICTED: pentatricopeptide repeat-containi...   142   3e-32
ref|XP_003602124.1| Pentatricopeptide repeat-containing protein ...   140   1e-31

>ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
           [Vitis vinifera]
          Length = 575

 Score =  150 bits (378), Expect = 1e-34
 Identities = 70/113 (61%), Positives = 92/113 (81%)
 Frame = -3

Query: 340 WNAMIGGYMRNGATELALRLFENMSNRTAVSCIQMIEGYAKTGDTKMARCIFDQVPLTLK 161
           WNAMI GY+ NG ++ A+ LFE MS RTAV+ I+MI+G+A++GDT+ AR  FD VP  L+
Sbjct: 163 WNAMICGYLGNGDSKSAVLLFEKMSIRTAVTWIEMIDGFARSGDTETARRFFDDVPSELR 222

Query: 160 NVVTWTVMVEGYASNGQMKAAKDIFEAMPERIFFAWSSMISGYFKNGDVEEGK 2
           NVVTWTVMV+GYA N +M+AA+++FE MP+R FFAWSSMISGY K G+V+E +
Sbjct: 223 NVVTWTVMVDGYARNAEMEAAREVFEGMPQRNFFAWSSMISGYCKKGNVKEAR 275



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 6/119 (5%)
 Frame = -3

Query: 340 WNAMIGGYMRNGATELALRLFENMSNRTAVSCIQMIEGYAKTGDTKMARCIFDQVPLTLK 161
           W  M+ GY RN   E A  +FE M  R   +   MI GY K G+ K AR IFD++P  ++
Sbjct: 227 WTVMVDGYARNAEMEAAREVFEGMPQRNFFAWSSMISGYCKKGNVKEARSIFDRIP--VR 284

Query: 160 NVVTWTVMVEGYASNGQMKAAKDIFEAM------PERIFFAWSSMISGYFKNGDVEEGK 2
           N+V W  ++ GYA NG  + A + F  M      P+ +  A  S++S   + G ++ GK
Sbjct: 285 NLVNWNSLISGYAQNGFSEEALEAFGKMQAEGFEPDEVTIA--SVLSACSQLGLLDAGK 341



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/75 (40%), Positives = 42/75 (56%)
 Frame = -3

Query: 226 YAKTGDTKMARCIFDQVPLTLKNVVTWTVMVEGYASNGQMKAAKDIFEAMPERIFFAWSS 47
           YAK G+   +R +FD +P   +N VTW  M+ GY  NG  K+A  +FE M  R    W  
Sbjct: 139 YAKCGNVVDSRKVFDYMPE--RNAVTWNAMICGYLGNGDSKSAVLLFEKMSIRTAVTWIE 196

Query: 46  MISGYFKNGDVEEGK 2
           MI G+ ++GD E  +
Sbjct: 197 MIDGFARSGDTETAR 211


>emb|CBI19956.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  150 bits (378), Expect = 1e-34
 Identities = 70/113 (61%), Positives = 92/113 (81%)
 Frame = -3

Query: 340 WNAMIGGYMRNGATELALRLFENMSNRTAVSCIQMIEGYAKTGDTKMARCIFDQVPLTLK 161
           WNAMI GY+ NG ++ A+ LFE MS RTAV+ I+MI+G+A++GDT+ AR  FD VP  L+
Sbjct: 34  WNAMICGYLGNGDSKSAVLLFEKMSIRTAVTWIEMIDGFARSGDTETARRFFDDVPSELR 93

Query: 160 NVVTWTVMVEGYASNGQMKAAKDIFEAMPERIFFAWSSMISGYFKNGDVEEGK 2
           NVVTWTVMV+GYA N +M+AA+++FE MP+R FFAWSSMISGY K G+V+E +
Sbjct: 94  NVVTWTVMVDGYARNAEMEAAREVFEGMPQRNFFAWSSMISGYCKKGNVKEAR 146



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 6/119 (5%)
 Frame = -3

Query: 340 WNAMIGGYMRNGATELALRLFENMSNRTAVSCIQMIEGYAKTGDTKMARCIFDQVPLTLK 161
           W  M+ GY RN   E A  +FE M  R   +   MI GY K G+ K AR IFD++P  ++
Sbjct: 98  WTVMVDGYARNAEMEAAREVFEGMPQRNFFAWSSMISGYCKKGNVKEARSIFDRIP--VR 155

Query: 160 NVVTWTVMVEGYASNGQMKAAKDIFEAM------PERIFFAWSSMISGYFKNGDVEEGK 2
           N+V W  ++ GYA NG  + A + F  M      P+ +  A  S++S   + G ++ GK
Sbjct: 156 NLVNWNSLISGYAQNGFSEEALEAFGKMQAEGFEPDEVTIA--SVLSACSQLGLLDAGK 212



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/75 (40%), Positives = 42/75 (56%)
 Frame = -3

Query: 226 YAKTGDTKMARCIFDQVPLTLKNVVTWTVMVEGYASNGQMKAAKDIFEAMPERIFFAWSS 47
           YAK G+   +R +FD +P   +N VTW  M+ GY  NG  K+A  +FE M  R    W  
Sbjct: 10  YAKCGNVVDSRKVFDYMPE--RNAVTWNAMICGYLGNGDSKSAVLLFEKMSIRTAVTWIE 67

Query: 46  MISGYFKNGDVEEGK 2
           MI G+ ++GD E  +
Sbjct: 68  MIDGFARSGDTETAR 82


>ref|XP_002526177.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534554|gb|EEF36253.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 293

 Score =  147 bits (371), Expect = 9e-34
 Identities = 71/113 (62%), Positives = 87/113 (76%)
 Frame = -3

Query: 340 WNAMIGGYMRNGATELALRLFENMSNRTAVSCIQMIEGYAKTGDTKMARCIFDQVPLTLK 161
           WNAMI GY+RN   + AL LFE MS RT V+ I+MI+G+A+ GD   ARC+FDQVPL  K
Sbjct: 9   WNAMISGYVRNRDMKSALGLFEKMSIRTMVTWIEMIDGFARNGDLVTARCLFDQVPLEQK 68

Query: 160 NVVTWTVMVEGYASNGQMKAAKDIFEAMPERIFFAWSSMISGYFKNGDVEEGK 2
           NVVTWTVMV+GYAS G+M  A+ +FE MP+R +F WSSMISGY K GDV+E +
Sbjct: 69  NVVTWTVMVDGYASKGKMADARILFEEMPDRNYFVWSSMISGYCKLGDVKEAR 121



 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 38/88 (43%), Positives = 49/88 (55%)
 Frame = -3

Query: 340 WNAMIGGYMRNGATELALRLFENMSNRTAVSCIQMIEGYAKTGDTKMARCIFDQVPLTLK 161
           W  M+ GY   G    A  LFE M +R       MI GY K GD K ARCIFD++P  ++
Sbjct: 73  WTVMVDGYASKGKMADARILFEEMPDRNYFVWSSMISGYCKLGDVKEARCIFDRIP--IR 130

Query: 160 NVVTWTVMVEGYASNGQMKAAKDIFEAM 77
           N+V W  ++ GYA NG  + A + FE M
Sbjct: 131 NLVNWNSLICGYAQNGFCEEALEAFENM 158



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/50 (46%), Positives = 30/50 (60%)
 Frame = -3

Query: 163 KNVVTWTVMVEGYASNGQMKAAKDIFEAMPERIFFAWSSMISGYFKNGDV 14
           +NVVTW  M+ GY  N  MK+A  +FE M  R    W  MI G+ +NGD+
Sbjct: 4   RNVVTWNAMISGYVRNRDMKSALGLFEKMSIRTMVTWIEMIDGFARNGDL 53


>ref|XP_003527965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g21470-like [Glycine max]
          Length = 535

 Score =  142 bits (358), Expect = 3e-32
 Identities = 68/111 (61%), Positives = 83/111 (74%)
 Frame = -3

Query: 340 WNAMIGGYMRNGATELALRLFENMSNRTAVSCIQMIEGYAKTGDTKMARCIFDQVPLTLK 161
           WNAMI GY+RNG TE A  +FE M  +T V+  QMI G+A+ GD   AR +FD+VP  LK
Sbjct: 115 WNAMISGYLRNGDTESAYLVFEKMQGKTQVTWSQMIGGFARNGDIATARRLFDEVPHELK 174

Query: 160 NVVTWTVMVEGYASNGQMKAAKDIFEAMPERIFFAWSSMISGYFKNGDVEE 8
           NVVTWTVMV+GYA  G+M+AA+++FE MPER  F WSSMI GYFK G+V E
Sbjct: 175 NVVTWTVMVDGYARIGEMEAAREVFEMMPERNCFVWSSMIHGYFKKGNVTE 225



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 41/117 (35%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
 Frame = -3

Query: 340 WNAMIGGYMRNGATELALRLFENMSNRTAVSCIQMIEGYAKTGDTKMARCIFDQVPLTLK 161
           W  M+ GY R G  E A  +FE M  R       MI GY K G+   A  +FD VP  ++
Sbjct: 179 WTVMVDGYARIGEMEAAREVFEMMPERNCFVWSSMIHGYFKKGNVTEAAAVFDWVP--VR 236

Query: 160 NVVTWTVMVEGYASNGQMKAAKDIFEAMPERIF----FAWSSMISGYFKNGDVEEGK 2
           N+  W  M+ GY  NG  + A   FE M    F    F   S++S   + G ++ GK
Sbjct: 237 NLEIWNSMIAGYVQNGFGEKALLAFEGMGAEGFEPDEFTVVSVLSACAQLGHLDVGK 293



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/75 (40%), Positives = 45/75 (60%)
 Frame = -3

Query: 238 MIEGYAKTGDTKMARCIFDQVPLTLKNVVTWTVMVEGYASNGQMKAAKDIFEAMPERIFF 59
           ++  Y+K G  + AR +FD +P   +NVVTW  M+ GY  NG  ++A  +FE M  +   
Sbjct: 87  LLTTYSKCGVVRDARNLFDTMPE--RNVVTWNAMISGYLRNGDTESAYLVFEKMQGKTQV 144

Query: 58  AWSSMISGYFKNGDV 14
            WS MI G+ +NGD+
Sbjct: 145 TWSQMIGGFARNGDI 159



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
 Frame = -3

Query: 340 WNAMIGGYMRNGATELALRLFENMSNR----TAVSCIQMIEGYAKTGDTKMARCIFDQVP 173
           WN+MI GY++NG  E AL  FE M          + + ++   A+ G   + + I   + 
Sbjct: 241 WNSMIAGYVQNGFGEKALLAFEGMGAEGFEPDEFTVVSVLSACAQLGHLDVGKQIHHMIE 300

Query: 172 LT--LKNVVTWTVMVEGYASNGQMKAAKDIFEAMPERIFFAWSSMISGYFKNGDVEE 8
               + N    + +V+ YA  G +  A+ +FE   E+  F W++MISG+  NG   E
Sbjct: 301 HKGIVVNPFVLSGLVDMYAKCGDLVNARLVFEGFTEKNIFCWNAMISGFAINGKCSE 357


>ref|XP_003602124.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491172|gb|AES72375.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 616

 Score =  140 bits (352), Expect = 1e-31
 Identities = 66/113 (58%), Positives = 82/113 (72%)
 Frame = -3

Query: 340 WNAMIGGYMRNGATELALRLFENMSNRTAVSCIQMIEGYAKTGDTKMARCIFDQVPLTLK 161
           WNAMIGGY+RNG  + AL  FE M  +T VS  QMI G+A+ GDT  AR  FD+VP  LK
Sbjct: 120 WNAMIGGYLRNGDAKSALLAFEEMPGKTRVSWSQMIGGFARNGDTLTARKFFDKVPYELK 179

Query: 160 NVVTWTVMVEGYASNGQMKAAKDIFEAMPERIFFAWSSMISGYFKNGDVEEGK 2
           +VV WTVMV+GYA  G+M+ A+++FE MPER +F WSSM+ GY K GDV E +
Sbjct: 180 DVVIWTVMVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAE 232



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/74 (44%), Positives = 44/74 (59%)
 Frame = -3

Query: 238 MIEGYAKTGDTKMARCIFDQVPLTLKNVVTWTVMVEGYASNGQMKAAKDIFEAMPERIFF 59
           ++  YAK G    AR +FD +P   +NVVTW  M+ GY  NG  K+A   FE MP +   
Sbjct: 92  IVAAYAKCGVVCDARKVFDLMPE--RNVVTWNAMIGGYLRNGDAKSALLAFEEMPGKTRV 149

Query: 58  AWSSMISGYFKNGD 17
           +WS MI G+ +NGD
Sbjct: 150 SWSQMIGGFARNGD 163



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
 Frame = -3

Query: 340 WNAMIGGYMRNGATELALRLFENMSNRTAVSCIQMIEGYAKTGDTKMARCIFDQVPLTLK 161
           W  M+ GY + G  E A  +FE M  R       M+ GY K GD   A  IF ++P+  +
Sbjct: 184 WTVMVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPV--R 241

Query: 160 NVVTWTVMVEGYASNGQMKAAKDIFEAMPERIF----FAWSSMISGYFKNGDVEEGK 2
           N+  W  M+ GY  NG  + A + F  M    F    F   S++S   + GD++ GK
Sbjct: 242 NLEIWNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGK 298



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
 Frame = -3

Query: 340 WNAMIGGYMRNGATELALRLFENMS----NRTAVSCIQMIEGYAKTGDTKMARCIFDQVP 173
           WN+MI GY++NG  E AL  F  M          + + ++   A+ GD    + +   + 
Sbjct: 246 WNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIE 305

Query: 172 LT--LKNVVTWTVMVEGYASNGQMKAAKDIFEAMPERIFFAWSSMISGYFKNGDVEE 8
                 N    + +++ YA  G +  A+ +FE+  ER  F W++MI+G+  NG   E
Sbjct: 306 CKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNE 362