BLASTX nr result

ID: Atractylodes21_contig00027735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027735
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17691.3| unnamed protein product [Vitis vinifera]               79   3e-13
ref|XP_002272273.1| PREDICTED: uncharacterized protein LOC100254...    76   2e-12
ref|XP_002533839.1| conserved hypothetical protein [Ricinus comm...    74   9e-12
ref|XP_002309779.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_002328016.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10

>emb|CBI17691.3| unnamed protein product [Vitis vinifera]
          Length = 531

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/76 (50%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
 Frame = -2

Query: 272 FVMILLLISIFSRIQG-QPTTIFQPENRSEASQVLDDTLRPDPLENLRKYRGGYDITNIH 96
           F ++ L +  F++I G     + Q EN SE  +  DDT+R DPL++  KYRGGYDITN H
Sbjct: 14  FSILTLSVLNFTQISGLSGRQLLQTENVSEPIRHSDDTVRVDPLDHFNKYRGGYDITNKH 73

Query: 95  YWSSTAYTGIAGYVLG 48
           YWSST +TG+ GY +G
Sbjct: 74  YWSSTIFTGVPGYAIG 89


>ref|XP_002272273.1| PREDICTED: uncharacterized protein LOC100254306 [Vitis vinifera]
          Length = 647

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 33/55 (60%), Positives = 41/55 (74%)
 Frame = -2

Query: 212 IFQPENRSEASQVLDDTLRPDPLENLRKYRGGYDITNIHYWSSTAYTGIAGYVLG 48
           + Q EN SE  +  DDT+R DPL++  KYRGGYDITN HYWSST +TG+ GY +G
Sbjct: 151 LLQTENVSEPIRHSDDTVRVDPLDHFNKYRGGYDITNKHYWSSTIFTGVPGYAIG 205


>ref|XP_002533839.1| conserved hypothetical protein [Ricinus communis]
           gi|223526218|gb|EEF28541.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 523

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
 Frame = -2

Query: 266 MILLLISIFSRIQGQPTTIFQPE----NRSEASQVLDDTLRPDPLENLRKYRGGYDITNI 99
           ++ +L S F   Q   T   +P     +RS  +Q  DDT+R DPL+N +KYRGGYDITN 
Sbjct: 16  LVSILGSHFIAAQTVSTNSSEPGTDLLDRSNVTQS-DDTVRVDPLDNFKKYRGGYDITNK 74

Query: 98  HYWSSTAYTGIAGYVLG 48
           HYWSST +TGI GY +G
Sbjct: 75  HYWSSTVFTGIYGYAIG 91


>ref|XP_002309779.1| predicted protein [Populus trichocarpa] gi|222852682|gb|EEE90229.1|
           predicted protein [Populus trichocarpa]
          Length = 558

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
 Frame = -2

Query: 260 LLLISIFSRIQGQPTTIFQPENRSEASQVL-DDTLRPDPLENLRKYRGGYDITNIHYWSS 84
           L+    FS    +P T  +  N      +  DDT+R DPLEN +KY+GGYD+ N HYWSS
Sbjct: 49  LIAAQTFSSNSSKPGTYVRDANNVSQPMIRSDDTVRLDPLENFKKYKGGYDVKNKHYWSS 108

Query: 83  TAYTGIAGYVLG 48
           T +TG+ GYV+G
Sbjct: 109 TIFTGVHGYVVG 120


>ref|XP_002328016.1| predicted protein [Populus trichocarpa] gi|222837425|gb|EEE75804.1|
           predicted protein [Populus trichocarpa]
          Length = 552

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 29/41 (70%), Positives = 36/41 (87%)
 Frame = -2

Query: 170 DDTLRPDPLENLRKYRGGYDITNIHYWSSTAYTGIAGYVLG 48
           DDT+R DPL++L+KYRGGYDI N HYWSST +TG+ GYV+G
Sbjct: 75  DDTVRVDPLKDLKKYRGGYDIKNKHYWSSTMFTGVHGYVIG 115


Top