BLASTX nr result

ID: Atractylodes21_contig00027718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027718
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA93735.1| retrotransposon protein, putative, unclassified [...   137   9e-31
gb|ABA91128.1| retrotransposon protein, putative, unclassified [...   136   2e-30
gb|ABA93940.1| retrotransposon protein, putative, Ty1-copia subc...   136   2e-30
gb|AAX92911.1| retrotransposon protein, putative, unclassified [...   136   2e-30
ref|NP_001175745.1| Os09g0272800 [Oryza sativa Japonica Group] g...   136   2e-30

>gb|ABA93735.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 842

 Score =  137 bits (345), Expect = 9e-31
 Identities = 62/92 (67%), Positives = 76/92 (82%)
 Frame = -3

Query: 345  WMKNQLTDYGLKFEKVPIFCDNTSAIAIANNPVFHSRTKHIDVRYHFIRDHIMKGDIELY 166
            W+ + L DYGL FEKVP+FCDNTSAI IA NPV HSRTKHID+R+HF+RDH+ KGDIEL 
Sbjct: 746  WLISTLKDYGLTFEKVPLFCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDIELM 805

Query: 165  FIPTDSQLADLFTKPLDDSRFNYLISELGMLN 70
            F+ T  QLAD+FTKPLD +RF +L  ELG+++
Sbjct: 806  FLDTKLQLADIFTKPLDSNRFAFLRGELGIIH 837


>gb|ABA91128.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1258

 Score =  136 bits (343), Expect = 2e-30
 Identities = 60/92 (65%), Positives = 76/92 (82%)
 Frame = -3

Query: 345  WMKNQLTDYGLKFEKVPIFCDNTSAIAIANNPVFHSRTKHIDVRYHFIRDHIMKGDIELY 166
            W+ + L DYGL FEKVP+FCDNTSAI IA NPV HSRTKHID+R+HF+RDH+ KGD+EL 
Sbjct: 1162 WLLSTLKDYGLTFEKVPLFCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQ 1221

Query: 165  FIPTDSQLADLFTKPLDDSRFNYLISELGMLN 70
            F+ T  Q+AD+FTKPLD +RF +L  ELG+++
Sbjct: 1222 FLDTKLQIADIFTKPLDSNRFAFLRGELGIIH 1253


>gb|ABA93940.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1508

 Score =  136 bits (342), Expect = 2e-30
 Identities = 59/92 (64%), Positives = 76/92 (82%)
 Frame = -3

Query: 345  WMKNQLTDYGLKFEKVPIFCDNTSAIAIANNPVFHSRTKHIDVRYHFIRDHIMKGDIELY 166
            W+ + L DYGL FEK+P+FCDNTSAI IA NPV HSRTKHID+R+HF+RDH+ KGD+EL 
Sbjct: 1412 WLLSTLKDYGLTFEKIPLFCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQ 1471

Query: 165  FIPTDSQLADLFTKPLDDSRFNYLISELGMLN 70
            F+ T  Q+AD+FTKPLD +RF +L  ELG+++
Sbjct: 1472 FLDTKLQIADIFTKPLDSNRFAFLRGELGVIH 1503


>gb|AAX92911.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|77549906|gb|ABA92703.1|
            retrotransposon protein, putative, unclassified [Oryza
            sativa Japonica Group]
          Length = 1323

 Score =  136 bits (342), Expect = 2e-30
 Identities = 59/92 (64%), Positives = 76/92 (82%)
 Frame = -3

Query: 345  WMKNQLTDYGLKFEKVPIFCDNTSAIAIANNPVFHSRTKHIDVRYHFIRDHIMKGDIELY 166
            W+ + L DYGL FEKVP+FCDNTSAI IA NP+ HSRTKHID+R+HF+RDH+ KGD+EL 
Sbjct: 1227 WLLSTLKDYGLTFEKVPLFCDNTSAINIAKNPIQHSRTKHIDIRFHFLRDHVEKGDVELQ 1286

Query: 165  FIPTDSQLADLFTKPLDDSRFNYLISELGMLN 70
            F+ T  Q+AD+FTKPLD +RF +L  ELG+++
Sbjct: 1287 FLDTKLQIADIFTKPLDSNRFAFLRGELGIIH 1318


>ref|NP_001175745.1| Os09g0272800 [Oryza sativa Japonica Group]
           gi|255678729|dbj|BAH94473.1| Os09g0272800 [Oryza sativa
           Japonica Group]
          Length = 707

 Score =  136 bits (342), Expect = 2e-30
 Identities = 59/92 (64%), Positives = 76/92 (82%)
 Frame = -3

Query: 345 WMKNQLTDYGLKFEKVPIFCDNTSAIAIANNPVFHSRTKHIDVRYHFIRDHIMKGDIELY 166
           W+ + L DYGL FEKVP+FCDNTSAI IA NP+ HSRTKHID+R+HF+RDH+ KGD+EL 
Sbjct: 593 WLLSTLKDYGLTFEKVPLFCDNTSAINIAKNPIQHSRTKHIDIRFHFLRDHVEKGDVELQ 652

Query: 165 FIPTDSQLADLFTKPLDDSRFNYLISELGMLN 70
           F+ T  Q+AD+FTKPLD +RF +L  ELG+++
Sbjct: 653 FLDTKLQIADIFTKPLDSNRFAFLRGELGVIH 684


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