BLASTX nr result

ID: Atractylodes21_contig00027694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027694
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated...   221   1e-55
ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated...   201   2e-49
ref|XP_003610453.1| U3 small nucleolar RNA-associated protein-li...   197   2e-48
ref|XP_003549767.1| PREDICTED: U3 small nucleolar RNA-associated...   197   2e-48
ref|XP_002310740.1| predicted protein [Populus trichocarpa] gi|2...   194   1e-47

>ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Vitis vinifera] gi|302144122|emb|CBI23227.3| unnamed
           protein product [Vitis vinifera]
          Length = 652

 Score =  221 bits (563), Expect = 1e-55
 Identities = 115/177 (64%), Positives = 136/177 (76%)
 Frame = -2

Query: 703 TPSKTDLSFVFNLLQIPLRKVAVSQAESLWLMGLKYFSNHKHYVDKLVDISVSSLIRXXX 524
           +PSK DL  +F LL+  L KVA+S+AE LWLM LK+FSNHKH+ DKLVDIS+ SL +   
Sbjct: 472 SPSKADLLSIFELLRNILTKVAISEAEGLWLMALKFFSNHKHFFDKLVDISLVSLAKDGG 531

Query: 523 XXXXXXXXSAIVNFVLQRNGIQSARDMYKRFLALPRPGLAFYRNCIEMELNLASSTGAKT 344
                   SAIVNFVLQ++GIQSAR+MYKRFLALPRPGL  Y+ CIE+ELNLA +   K 
Sbjct: 532 SENGFCLSSAIVNFVLQKDGIQSAREMYKRFLALPRPGLPMYKICIELELNLA-AINDKD 590

Query: 343 NLVEARKLYEAVLSTYDQDASLWQDYHSMESKMGTSETAAAVHWRARKTLKGNVTLL 173
            LV ARKL+E+ L+TYDQD +LWQDY+SME KMGTSETAAAVHWRARK LK    L+
Sbjct: 591 CLVNARKLFESALTTYDQDINLWQDYYSMEIKMGTSETAAAVHWRARKKLKDAAALI 647


>ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Glycine max]
          Length = 655

 Score =  201 bits (510), Expect = 2e-49
 Identities = 99/172 (57%), Positives = 129/172 (75%)
 Frame = -2

Query: 706 TTPSKTDLSFVFNLLQIPLRKVAVSQAESLWLMGLKYFSNHKHYVDKLVDISVSSLIRXX 527
           ++PS  DL  +F LLQ  L KV+VS++E+LWL  LK+++N + Y DKLV+ISV +L+R  
Sbjct: 474 SSPSDADLQSLFELLQQILMKVSVSKSENLWLKALKFYANQRQYFDKLVEISVVTLVRDG 533

Query: 526 XXXXXXXXXSAIVNFVLQRNGIQSARDMYKRFLALPRPGLAFYRNCIEMELNLASSTGAK 347
                     AIV+F+ Q++GIQ  RD+YKRFLALPRPGLA YR+CI++E NLA S G K
Sbjct: 534 GSENGFSLSFAIVSFIFQKDGIQKTRDIYKRFLALPRPGLALYRHCIDLETNLA-SIGDK 592

Query: 346 TNLVEARKLYEAVLSTYDQDASLWQDYHSMESKMGTSETAAAVHWRARKTLK 191
             L+ ARKLYE+ L+TYDQ+ SLWQDY+ ME+KMGTSE A A++WRARK LK
Sbjct: 593 DGLINARKLYESALATYDQNVSLWQDYYRMETKMGTSEKANAIYWRARKVLK 644


>ref|XP_003610453.1| U3 small nucleolar RNA-associated protein-like protein [Medicago
           truncatula] gi|355511508|gb|AES92650.1| U3 small
           nucleolar RNA-associated protein-like protein [Medicago
           truncatula]
          Length = 647

 Score =  197 bits (501), Expect = 2e-48
 Identities = 101/170 (59%), Positives = 126/170 (74%)
 Frame = -2

Query: 700 PSKTDLSFVFNLLQIPLRKVAVSQAESLWLMGLKYFSNHKHYVDKLVDISVSSLIRXXXX 521
           PS TDLS +F LL+  L K  VS++E+LWL  LK++++H+ Y DKLV+ISV SL R    
Sbjct: 467 PSDTDLSSLFELLRQILTKFHVSKSENLWLRALKFYASHRRYFDKLVEISVLSLARDGGS 526

Query: 520 XXXXXXXSAIVNFVLQRNGIQSARDMYKRFLALPRPGLAFYRNCIEMELNLASSTGAKTN 341
                  SAIV+F+LQ++GI  ARD+YKR+LALP PGLA YR CIE+E NLA STG K +
Sbjct: 527 ESGFSLSSAIVSFILQKDGIHKARDIYKRYLALPHPGLALYRKCIELEANLA-STGDKNS 585

Query: 340 LVEARKLYEAVLSTYDQDASLWQDYHSMESKMGTSETAAAVHWRARKTLK 191
           LV ARKLYE+ L+TYDQ+   WQDY+ ME KMGTS+ A AV+WRARK LK
Sbjct: 586 LVNARKLYESALATYDQNVDFWQDYYRMEVKMGTSQQATAVYWRARKILK 635


>ref|XP_003549767.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Glycine max]
          Length = 649

 Score =  197 bits (500), Expect = 2e-48
 Identities = 99/172 (57%), Positives = 128/172 (74%)
 Frame = -2

Query: 706 TTPSKTDLSFVFNLLQIPLRKVAVSQAESLWLMGLKYFSNHKHYVDKLVDISVSSLIRXX 527
           ++PS  DL  +F LLQ  L KV+VS++E+LWL  LK+++N + Y DKLV+ISV +L+R  
Sbjct: 468 SSPSDADLQSLFELLQQILMKVSVSRSENLWLKALKFYANQRRYFDKLVEISVVTLVRDG 527

Query: 526 XXXXXXXXXSAIVNFVLQRNGIQSARDMYKRFLALPRPGLAFYRNCIEMELNLASSTGAK 347
                    SAIV+F+LQ++GIQ  RD+YKRFLALP PGLA YR CI++E NLA S G K
Sbjct: 528 GSENGFSLSSAIVSFILQKDGIQKTRDIYKRFLALPLPGLALYRRCIDLETNLA-SIGDK 586

Query: 346 TNLVEARKLYEAVLSTYDQDASLWQDYHSMESKMGTSETAAAVHWRARKTLK 191
             L+ ARKLYE+ L+TYDQ+ SLWQDY+ +E KMGTSE A A++WRARK LK
Sbjct: 587 DGLINARKLYESSLATYDQNVSLWQDYYRLEIKMGTSEKATAIYWRARKVLK 638


>ref|XP_002310740.1| predicted protein [Populus trichocarpa] gi|222853643|gb|EEE91190.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score =  194 bits (493), Expect = 1e-47
 Identities = 101/179 (56%), Positives = 125/179 (69%)
 Frame = -2

Query: 706 TTPSKTDLSFVFNLLQIPLRKVAVSQAESLWLMGLKYFSNHKHYVDKLVDISVSSLIRXX 527
           + PSK D  +V  LL+  L KV++SQAE LWLM L  F+  K Y+DKLV+IS+ S+ +  
Sbjct: 461 SAPSKDDFQYVLGLLRSALTKVSISQAEDLWLMALNVFAKQKKYLDKLVEISLISVAKDG 520

Query: 526 XXXXXXXXXSAIVNFVLQRNGIQSARDMYKRFLALPRPGLAFYRNCIEMELNLASSTGAK 347
                    SAIVNF+LQ++GI  AR  YKRFLALP PGL  YR CIE+E+NLA S G K
Sbjct: 521 GSDDGFSLSSAIVNFMLQKDGIHKARKTYKRFLALPHPGLVLYRCCIELEVNLA-SVGDK 579

Query: 346 TNLVEARKLYEAVLSTYDQDASLWQDYHSMESKMGTSETAAAVHWRARKTLKGNVTLLS 170
             L  ARKLYE+ L+TY QD +LWQ+YHSME K+GTSETA AV WRARKTLK +   ++
Sbjct: 580 DCLANARKLYESALATYGQDVTLWQNYHSMEIKLGTSETANAVCWRARKTLKNSAAFVA 638


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