BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027653
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]             59   4e-07
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain...    59   4e-07
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]...    59   4e-07

>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
          Length = 1886

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/68 (38%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = -3

Query: 222  CYICNKKGHFAKDCKDKKKSQALIQTLSQNEEVDI-SDLESLYSLDDEPNDQVLCSIAYT 46
            C+ C K GHF+++C   KKS  LI  + +   +DI  DLES++S++DEP++  L S+ + 
Sbjct: 1113 CFTCGKIGHFSRNCPQNKKSIKLISEIQKYTGIDIEDDLESVFSIEDEPSEDTLFSLEFY 1172

Query: 45   DFSSDEEY 22
            +  + E+Y
Sbjct: 1173 EEYAGEQY 1180


>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
            protein; Short=MP; Contains: RecName: Full=Capsid
            protein; Short=CP; Contains: RecName: Full=Aspartic
            protease; Short=PR; Contains: RecName: Full=Reverse
            transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
            polyprotein 1 [Petunia vein clearing virus]
          Length = 2180

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/68 (38%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = -3

Query: 222  CYICNKKGHFAKDCKDKKKSQALIQTLSQNEEVDI-SDLESLYSLDDEPNDQVLCSIAYT 46
            C+ C K GHF+++C   KKS  LI  + +   +DI  DLES++S++DEP++  L S+ + 
Sbjct: 1113 CFTCGKIGHFSRNCPQNKKSIKLISEIQKYTGIDIEDDLESVFSIEDEPSEDTLFSLEFY 1172

Query: 45   DFSSDEEY 22
            +  + E+Y
Sbjct: 1173 EEYAGEQY 1180


>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
            gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
            polyprotein; Contains: RecName: Full=Movement protein;
            Short=MP; Contains: RecName: Full=Capsid protein;
            Short=CP; Contains: RecName: Full=Aspartic protease;
            Short=PR; Contains: RecName: Full=Reverse transcriptase;
            Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
            [petunia vein clearing virus]
          Length = 2179

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/68 (38%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = -3

Query: 222  CYICNKKGHFAKDCKDKKKSQALIQTLSQNEEVDI-SDLESLYSLDDEPNDQVLCSIAYT 46
            C+ C K GHF+++C   KKS  LI  + +   +DI  DLES++S++DEP++  L S+ + 
Sbjct: 1112 CFTCGKIGHFSRNCPQNKKSIKLISEIQKYTGIDIEDDLESVFSIEDEPSEDTLFSLEFY 1171

Query: 45   DFSSDEEY 22
            +  + E+Y
Sbjct: 1172 EEYAGEQY 1179