BLASTX nr result

ID: Atractylodes21_contig00027638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027638
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516267.1| PREDICTED: zinc finger CCCH domain-containin...    64   2e-08
ref|XP_004141305.1| PREDICTED: zinc finger CCCH domain-containin...    60   3e-07

>ref|XP_003516267.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           [Glycine max]
          Length = 350

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 51/156 (32%), Positives = 73/156 (46%), Gaps = 40/156 (25%)
 Frame = -1

Query: 625 AHTPEQLRILP--ASHHVSTHPGSYDGSPSRLLQLGSSPTSTLYLSHCXXXXXXXXXXXX 452
           AHTPEQLR+LP  +   V+    SYDGSP R + L S+  +    S              
Sbjct: 181 AHTPEQLRVLPMQSPRSVANSSESYDGSPMRQVSLSSAAAAAFMSS---PAASLSPPESP 237

Query: 451 XSVGDLALTMRNLQIGKATRL----SMSVMSP---------------------------- 368
            SV ++  ++RNLQ+GK   +    ++SV SP                            
Sbjct: 238 PSVNEMVASLRNLQLGKMKSMPHNRNVSVGSPRGSVLRPGFLSLPTTPTQQPVRSGVKCF 297

Query: 367 SVWGGA------MERVESGKGVRAQIYAKLSRENSV 278
            VW  +      MERVESG+G+RA+++ KLS+ENS+
Sbjct: 298 DVWDESFEEEPVMERVESGRGIRAKMFEKLSKENSL 333


>ref|XP_004141305.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
           [Cucumis sativus] gi|449521397|ref|XP_004167716.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           49-like [Cucumis sativus]
          Length = 349

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 61/163 (37%), Positives = 74/163 (45%), Gaps = 45/163 (27%)
 Frame = -1

Query: 625 AHTPEQLRILPA-SHHVSTHPGSYDGSPSRLLQL-------GS---SPTSTLY---LSHC 488
           AHTPEQLR+LP  S        S DGS SR+          GS   SPTS L    +S  
Sbjct: 171 AHTPEQLRVLPQQSPRTPVSADSVDGS-SRIAHAFDSYFSKGSFVTSPTSILSTPPVSPP 229

Query: 487 XXXXXXXXXXXXXSVGDLALTMRNLQIGKAT--------RLSMSVMSPS----------- 365
                        SV  L   MRNLQ+GK          +L  + +SPS           
Sbjct: 230 SDSPPLSPNCPFNSVNGLVSCMRNLQLGKLKATPHWGRIQLGQNPLSPSSSGLYNLPSTP 289

Query: 364 ------VWGG------AMERVESGKGVRAQIYAKLSRENSVSE 272
                 +WG       AMERVESG+ +RAQ+YAKLS++NSV E
Sbjct: 290 TTGNYELWGKNYEEEPAMERVESGRDLRAQMYAKLSKDNSVKE 332


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