BLASTX nr result
ID: Atractylodes21_contig00027638
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00027638 (625 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003516267.1| PREDICTED: zinc finger CCCH domain-containin... 64 2e-08 ref|XP_004141305.1| PREDICTED: zinc finger CCCH domain-containin... 60 3e-07 >ref|XP_003516267.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like [Glycine max] Length = 350 Score = 64.3 bits (155), Expect = 2e-08 Identities = 51/156 (32%), Positives = 73/156 (46%), Gaps = 40/156 (25%) Frame = -1 Query: 625 AHTPEQLRILP--ASHHVSTHPGSYDGSPSRLLQLGSSPTSTLYLSHCXXXXXXXXXXXX 452 AHTPEQLR+LP + V+ SYDGSP R + L S+ + S Sbjct: 181 AHTPEQLRVLPMQSPRSVANSSESYDGSPMRQVSLSSAAAAAFMSS---PAASLSPPESP 237 Query: 451 XSVGDLALTMRNLQIGKATRL----SMSVMSP---------------------------- 368 SV ++ ++RNLQ+GK + ++SV SP Sbjct: 238 PSVNEMVASLRNLQLGKMKSMPHNRNVSVGSPRGSVLRPGFLSLPTTPTQQPVRSGVKCF 297 Query: 367 SVWGGA------MERVESGKGVRAQIYAKLSRENSV 278 VW + MERVESG+G+RA+++ KLS+ENS+ Sbjct: 298 DVWDESFEEEPVMERVESGRGIRAKMFEKLSKENSL 333 >ref|XP_004141305.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like [Cucumis sativus] gi|449521397|ref|XP_004167716.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like [Cucumis sativus] Length = 349 Score = 60.1 bits (144), Expect = 3e-07 Identities = 61/163 (37%), Positives = 74/163 (45%), Gaps = 45/163 (27%) Frame = -1 Query: 625 AHTPEQLRILPA-SHHVSTHPGSYDGSPSRLLQL-------GS---SPTSTLY---LSHC 488 AHTPEQLR+LP S S DGS SR+ GS SPTS L +S Sbjct: 171 AHTPEQLRVLPQQSPRTPVSADSVDGS-SRIAHAFDSYFSKGSFVTSPTSILSTPPVSPP 229 Query: 487 XXXXXXXXXXXXXSVGDLALTMRNLQIGKAT--------RLSMSVMSPS----------- 365 SV L MRNLQ+GK +L + +SPS Sbjct: 230 SDSPPLSPNCPFNSVNGLVSCMRNLQLGKLKATPHWGRIQLGQNPLSPSSSGLYNLPSTP 289 Query: 364 ------VWGG------AMERVESGKGVRAQIYAKLSRENSVSE 272 +WG AMERVESG+ +RAQ+YAKLS++NSV E Sbjct: 290 TTGNYELWGKNYEEEPAMERVESGRDLRAQMYAKLSKDNSVKE 332