BLASTX nr result

ID: Atractylodes21_contig00027621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027621
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39466.3| unnamed protein product [Vitis vinifera]               60   2e-07
emb|CAN80717.1| hypothetical protein VITISV_003239 [Vitis vinifera]    59   4e-07
ref|XP_002316992.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06
ref|NP_192993.2| F-box protein CPR30 [Arabidopsis thaliana] gi|1...    55   6e-06
dbj|BAF01202.1| hypothetical protein [Arabidopsis thaliana]            55   6e-06

>emb|CBI39466.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
 Frame = +1

Query: 28  MAQLPLIIHEQILIRLSVRDLIRCRSVSRSWLSLISDPHFIKAHLERSYHMIATMLDT-- 201
           MA+LPL I E IL+RL V+ LIR R V ++W +LIS PHF+K+HL        T   T  
Sbjct: 1   MAELPLHIIENILLRLPVKSLIRSRCVCKAWRTLISHPHFVKSHLRLPQTQARTQFCTLN 60

Query: 202 ----GDSLYL 219
               GD+ YL
Sbjct: 61  YGEPGDNYYL 70


>emb|CAN80717.1| hypothetical protein VITISV_003239 [Vitis vinifera]
          Length = 381

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
 Frame = +1

Query: 28  MAQLPLIIHEQILIRLSVRDLIRCRSVSRSWLSLISDPHFIKAHLERSYHMIATMLDT-- 201
           MA+LPL I E IL+RL V+ LIR R V ++W  LIS PHF+K+HL        T   T  
Sbjct: 1   MAELPLHIIENILLRLPVKSLIRSRCVCKAWRXLISHPHFVKSHLRLPQTQARTQFCTLN 60

Query: 202 ----GDSLYL 219
               GD+ YL
Sbjct: 61  YGEPGDNYYL 70


>ref|XP_002316992.1| predicted protein [Populus trichocarpa] gi|222860057|gb|EEE97604.1|
           predicted protein [Populus trichocarpa]
          Length = 411

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 25/49 (51%), Positives = 36/49 (73%)
 Frame = +1

Query: 25  LMAQLPLIIHEQILIRLSVRDLIRCRSVSRSWLSLISDPHFIKAHLERS 171
           L+A+LP  +   IL RL +R L+ C+SV ++WL L+SDP F++ HLERS
Sbjct: 35  LVAELPNALIIDILSRLPIRPLLNCKSVCKTWLHLMSDPSFVRLHLERS 83


>ref|NP_192993.2| F-box protein CPR30 [Arabidopsis thaliana]
           gi|145333023|ref|NP_001078377.1| F-box protein CPR30
           [Arabidopsis thaliana]
           gi|142989747|sp|Q9SU30.2|CPR30_ARATH RecName: Full=F-box
           protein CPR30; AltName: Full=Protein CONSTITUTIVE
           EXPRESSER OF PR GENES 30 gi|332657747|gb|AEE83147.1|
           F-box protein CPR30 [Arabidopsis thaliana]
           gi|332657748|gb|AEE83148.1| F-box protein CPR30
           [Arabidopsis thaliana]
          Length = 413

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/73 (38%), Positives = 43/73 (58%)
 Frame = +1

Query: 28  MAQLPLIIHEQILIRLSVRDLIRCRSVSRSWLSLISDPHFIKAHLERSYHMIATMLDTGD 207
           MA +P+ I   I +RL  + L+RCR++S+    LI+DP FI++HL R       +L TGD
Sbjct: 1   MATIPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHR-------VLQTGD 53

Query: 208 SLYLQFPGVMAIY 246
            L +   G + +Y
Sbjct: 54  HLMILLRGALRLY 66


>dbj|BAF01202.1| hypothetical protein [Arabidopsis thaliana]
          Length = 413

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/73 (38%), Positives = 43/73 (58%)
 Frame = +1

Query: 28  MAQLPLIIHEQILIRLSVRDLIRCRSVSRSWLSLISDPHFIKAHLERSYHMIATMLDTGD 207
           MA +P+ I   I +RL  + L+RCR++S+    LI+DP FI++HL R       +L TGD
Sbjct: 1   MATIPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHR-------VLQTGD 53

Query: 208 SLYLQFPGVMAIY 246
            L +   G + +Y
Sbjct: 54  HLMILLRGALRLY 66


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