BLASTX nr result

ID: Atractylodes21_contig00027611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027611
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002871480.1| hypothetical protein ARALYDRAFT_487995 [Arab...   199   2e-49
gb|AAM63715.1| unknown [Arabidopsis thaliana]                         197   1e-48
ref|NP_568250.1| regulator of chromosome condensation repeat-con...   193   1e-47
ref|XP_002324218.1| predicted protein [Populus trichocarpa] gi|2...   191   7e-47
ref|XP_004162977.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   188   4e-46

>ref|XP_002871480.1| hypothetical protein ARALYDRAFT_487995 [Arabidopsis lyrata subsp.
           lyrata] gi|297317317|gb|EFH47739.1| hypothetical protein
           ARALYDRAFT_487995 [Arabidopsis lyrata subsp. lyrata]
          Length = 554

 Score =  199 bits (506), Expect = 2e-49
 Identities = 94/158 (59%), Positives = 117/158 (74%), Gaps = 1/158 (0%)
 Frame = -3

Query: 473 DISRKVIAIAAGEAHTLALTGDGSVYSWGRGTFGRLGTGSEVDQLFPAKIEFNFKGRRR- 297
           D+SRK+I++AAGEAHT+ALTGDG VYSWGRG FGRLGTG E D+L P ++EF F  +   
Sbjct: 13  DLSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVRVEFEFPNQAEG 72

Query: 296 ERVKIVGVAAGAYHSLALSDDGSVWSWGYNTYGQLGINVENSLVPSLVEAFQXXXXXXXX 117
           +R++IVG+AAGAYHSLA+SDDGSVW WGYN YGQLG + ENSL P L++           
Sbjct: 73  DRIRIVGIAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPCLIKNLFEQGASISS 132

Query: 116 XXXXXXXSEAGLKISSVKAGGMMSLAIDDLGSLWMWGN 3
                  + + LK+ +VKAG MMSLAID++G LWMWGN
Sbjct: 133 LNDSGREARSDLKVCAVKAGSMMSLAIDNVGGLWMWGN 170


>gb|AAM63715.1| unknown [Arabidopsis thaliana]
          Length = 553

 Score =  197 bits (500), Expect = 1e-48
 Identities = 95/157 (60%), Positives = 116/157 (73%)
 Frame = -3

Query: 473 DISRKVIAIAAGEAHTLALTGDGSVYSWGRGTFGRLGTGSEVDQLFPAKIEFNFKGRRRE 294
           D+SRK+I++AAGEAHT+ALTGDG VYSWGRG FGRLGTG E D+L P ++EF  +    E
Sbjct: 13  DLSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVRVEFPNQA-EGE 71

Query: 293 RVKIVGVAAGAYHSLALSDDGSVWSWGYNTYGQLGINVENSLVPSLVEAFQXXXXXXXXX 114
           R++I+GVAAGAYHSLA+SDDGSVW WGYN YGQLG + ENSL P LV+            
Sbjct: 72  RIRIIGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPCLVKNLFEQEASSSSL 131

Query: 113 XXXXXXSEAGLKISSVKAGGMMSLAIDDLGSLWMWGN 3
                 + + LK+ +VKAG MMSLAID++G LWMWGN
Sbjct: 132 NDSGREARSDLKVGTVKAGSMMSLAIDNVGGLWMWGN 168


>ref|NP_568250.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana] gi|16604485|gb|AAL24248.1|
           AT5g11580/F15N18_170 [Arabidopsis thaliana]
           gi|18958034|gb|AAL79590.1| AT5g11580/F15N18_170
           [Arabidopsis thaliana] gi|332004314|gb|AED91697.1|
           regulator of chromosome condensation repeat-containing
           protein [Arabidopsis thaliana]
          Length = 553

 Score =  193 bits (490), Expect = 1e-47
 Identities = 94/157 (59%), Positives = 114/157 (72%)
 Frame = -3

Query: 473 DISRKVIAIAAGEAHTLALTGDGSVYSWGRGTFGRLGTGSEVDQLFPAKIEFNFKGRRRE 294
           D+SRK+I++AAGEAHT+ALTGDG VYSWGRG FGRLGTG E D+L P  +EF  +    +
Sbjct: 13  DLSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQA-EGD 71

Query: 293 RVKIVGVAAGAYHSLALSDDGSVWSWGYNTYGQLGINVENSLVPSLVEAFQXXXXXXXXX 114
           R++IVGVAAGAYHSLA+SDDGSVW WGYN YGQLG + ENSL P L++            
Sbjct: 72  RIRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPCLIKNLFERETSSSSL 131

Query: 113 XXXXXXSEAGLKISSVKAGGMMSLAIDDLGSLWMWGN 3
                   + LK+ +VKAG MMSLAID++G LWMWGN
Sbjct: 132 NDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGN 168


>ref|XP_002324218.1| predicted protein [Populus trichocarpa] gi|222865652|gb|EEF02783.1|
           predicted protein [Populus trichocarpa]
          Length = 561

 Score =  191 bits (484), Expect = 7e-47
 Identities = 94/156 (60%), Positives = 115/156 (73%)
 Frame = -3

Query: 470 ISRKVIAIAAGEAHTLALTGDGSVYSWGRGTFGRLGTGSEVDQLFPAKIEFNFKGRRRER 291
           +S KV+++A GEAH+L LTGDG VYSWG+G FGRLGTGSEVD+LFP +++  F+    +R
Sbjct: 7   LSGKVVSVATGEAHSLILTGDGRVYSWGKGMFGRLGTGSEVDELFPVQVK--FETCVEKR 64

Query: 290 VKIVGVAAGAYHSLALSDDGSVWSWGYNTYGQLGINVENSLVPSLVEAFQXXXXXXXXXX 111
           +  VGVAAGAYHSLAL+DDGSVW WGYN YGQLG++ EN  +P L++ F           
Sbjct: 65  LNFVGVAAGAYHSLALADDGSVWCWGYNIYGQLGVSGENYSMPHLMDQFLELGSLGSLID 124

Query: 110 XXXXXSEAGLKISSVKAGGMMSLAIDDLGSLWMWGN 3
                SE  LKI S+KAGGMMSLAIDD G+LWMWGN
Sbjct: 125 HSETKSEGPLKICSIKAGGMMSLAIDDHGALWMWGN 160



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 42/129 (32%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
 Frame = -3

Query: 482 THVDISRKVIAIAAGEAHTLALTGDGSVYSWGRGTFGRLGTGSE---VDQLFPAKIEFNF 312
           T V+     + +AAG  H+LAL  DGSV+ WG   +G+LG   E   +  L    +E   
Sbjct: 59  TCVEKRLNFVGVAAGAYHSLALADDGSVWCWGYNIYGQLGVSGENYSMPHLMDQFLELGS 118

Query: 311 KG--------RRRERVKIVGVAAGAYHSLALSDDGSVWSWG-----YNTYGQLGINVENS 171
            G        +    +KI  + AG   SLA+ D G++W WG      N  G   I+ E+S
Sbjct: 119 LGSLIDHSETKSEGPLKICSIKAGGMMSLAIDDHGALWMWGNCPQQRNKTGS-SISFESS 177

Query: 170 LVPSLVEAF 144
            +P  V  F
Sbjct: 178 FIPIPVRDF 186


>ref|XP_004162977.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 581

 Score =  188 bits (477), Expect = 4e-46
 Identities = 94/168 (55%), Positives = 115/168 (68%), Gaps = 3/168 (1%)
 Frame = -3

Query: 497 MAEAGTHVD---ISRKVIAIAAGEAHTLALTGDGSVYSWGRGTFGRLGTGSEVDQLFPAK 327
           M E+GT      +S KV+AI+AGEAHTL LTGDG VYSWGRG FGRLGTG+E D+LFP +
Sbjct: 1   MEESGTRPSSGKLSGKVVAISAGEAHTLVLTGDGRVYSWGRGMFGRLGTGAESDELFPVR 60

Query: 326 IEFNFKGRRRERVKIVGVAAGAYHSLALSDDGSVWSWGYNTYGQLGINVENSLVPSLVEA 147
           ++    G   E +K+V +AAG+YHSLAL+DDGSVW WGYN YGQLG +  NS  P L++ 
Sbjct: 61  VKL---GSGEENLKVVAIAAGSYHSLALTDDGSVWCWGYNIYGQLGFDGGNSATPCLLKQ 117

Query: 146 FQXXXXXXXXXXXXXXXSEAGLKISSVKAGGMMSLAIDDLGSLWMWGN 3
           F                S+  LKI  +KAGG +S AIDDLG+LWMWGN
Sbjct: 118 FLELEPPESLTEESGSKSKGSLKICDIKAGGQISFAIDDLGALWMWGN 165


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