BLASTX nr result

ID: Atractylodes21_contig00027573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027573
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523656.1| chromodomain helicase DNA binding protein, p...   143   2e-32
ref|NP_199293.3| chromatin remodeling 4 protein [Arabidopsis tha...   141   6e-32
emb|CBI27197.3| unnamed protein product [Vitis vinifera]              141   6e-32
ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793...   140   1e-31
ref|XP_002329920.1| chromatin remodeling complex subunit [Populu...   132   3e-29

>ref|XP_002523656.1| chromodomain helicase DNA binding protein, putative [Ricinus
            communis] gi|223537108|gb|EEF38742.1| chromodomain
            helicase DNA binding protein, putative [Ricinus communis]
          Length = 2257

 Score =  143 bits (360), Expect = 2e-32
 Identities = 95/232 (40%), Positives = 115/232 (49%), Gaps = 66/232 (28%)
 Frame = +2

Query: 2    EDNSGNVSEENEWDKLLRVRWERYQSEEEAALGRGKRVRKAVSYREAYAPQTIETSNQNG 181
            EDN   ++EENEWD+LLR RWE+Y++EEEAALGRGKR RK VSYREAYAP   ET +++G
Sbjct: 1279 EDNVVTIAEENEWDRLLRSRWEKYRNEEEAALGRGKRQRKTVSYREAYAPHLSETLSESG 1338

Query: 182  A--AXXXXXXXXXXYTPAGRALKMKFAKLRARQKDRLARMKTFRESLPVE---------- 325
                          YTPAGRALK K+AKLRARQKDRLA+     ES P E          
Sbjct: 1339 GEEEREPETEPEREYTPAGRALKAKYAKLRARQKDRLAQRSAIEESRPNEGLLVPEFFQL 1398

Query: 326  ----------DQ--------------EDMPSQTLDPPRSNTNPNLNPGKGKDLERSG--- 424
                      DQ               ++    LD P+S  +  L  G+   L+ S    
Sbjct: 1399 HNLSTNERDKDQAMELVQQVREKSSVNEVEDNPLDTPKSKADSTLRLGRVSKLKISSHLD 1458

Query: 425  ---------------------------KLLPVLGLRAPNAELMESAYRNSSR 499
                                        LLPVLGL APNA  +ES++RNSSR
Sbjct: 1459 LSVNSIDHPSSDIIPDQQNQGAGHINYNLLPVLGLCAPNANQLESSHRNSSR 1510


>ref|NP_199293.3| chromatin remodeling 4 protein [Arabidopsis thaliana]
            gi|332007781|gb|AED95164.1| chromatin remodeling 4
            protein [Arabidopsis thaliana]
          Length = 2223

 Score =  141 bits (355), Expect = 6e-32
 Identities = 88/197 (44%), Positives = 108/197 (54%), Gaps = 31/197 (15%)
 Frame = +2

Query: 2    EDNSGNVSEENEWDKLLRVRWERYQSEEEAALGRGKRVRKAVSYREAYAPQTIETSNQNG 181
            +D+  N +EENEWD+LLR+RWE+YQSEEEAALGRGKR+RKAVSYREAYAP T    N++G
Sbjct: 1296 DDDVVNFTEENEWDRLLRMRWEKYQSEEEAALGRGKRLRKAVSYREAYAPHTSGPVNESG 1355

Query: 182  A--AXXXXXXXXXXYTPAGRALKMKFAKLRARQKDRLARMKTFRESLPV----------- 322
                          YTPAGRALK KF KLR RQK+ +AR  +  ESLP            
Sbjct: 1356 GEDEKEPEPELKKEYTPAGRALKEKFTKLRERQKNLIARRNSVEESLPSGNVDQVTEVAN 1415

Query: 323  EDQEDMPSQTLDPPRSNTNPNLNPGKGKDLERSGKL------------------LPVLGL 448
            +D+E   S  LD  +++   +    K    +    L                  LPVLGL
Sbjct: 1416 QDEESPTSMDLDDSKASQQCDAQKRKASSSDPKPDLLSQHHHGAECLPSLPPNNLPVLGL 1475

Query: 449  RAPNAELMESAYRNSSR 499
             APN    ES+ RN SR
Sbjct: 1476 CAPNFTQSESSRRNYSR 1492


>emb|CBI27197.3| unnamed protein product [Vitis vinifera]
          Length = 1638

 Score =  141 bits (355), Expect = 6e-32
 Identities = 93/208 (44%), Positives = 110/208 (52%), Gaps = 49/208 (23%)
 Frame = +2

Query: 23   SEENEWDKLLRVRWERYQSEEEAALGRGKRVRKAVSYREAYAPQTIETSNQNGAA--XXX 196
            +EENEWDKLLR+RWE+YQSEEEAALGRGKR RKAVSYREAYAP   ET +++G       
Sbjct: 779  TEENEWDKLLRIRWEKYQSEEEAALGRGKRQRKAVSYREAYAPHPSETLSESGGEEDREP 838

Query: 197  XXXXXXXYTPAGRALKMKFAKLRARQKDRLARMKTF--------------RESLPVEDQE 334
                   YTPAGRALK KFAKLRARQK+RLA+                  RE  P  D E
Sbjct: 839  EPEPEREYTPAGRALKAKFAKLRARQKERLAQRNAIERSCNQVTRLAQPVREKAPAIDLE 898

Query: 335  D-MPSQTLDPPRSNTNPNLNPGKGK------DLER------------------------- 418
            D    Q LD  +   + N+  G+        DL                           
Sbjct: 899  DGKIGQPLDAMKGKADSNVRLGRQSRHKSHLDLSARALGHPSPDIFLPSHHYQGTSYTNL 958

Query: 419  -SGKLLPVLGLRAPNAELMESAYRNSSR 499
             +  LLPVLGL APNA  +ES+++N SR
Sbjct: 959  VANNLLPVLGLCAPNATQLESSHKNFSR 986


>ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793933 [Glycine max]
          Length = 2325

 Score =  140 bits (353), Expect = 1e-31
 Identities = 72/110 (65%), Positives = 81/110 (73%), Gaps = 2/110 (1%)
 Frame = +2

Query: 2    EDNSGNVSEENEWDKLLRVRWERYQSEEEAALGRGKRVRKAVSYREAYAPQTIETSNQNG 181
            EDN+ N +EENEWDKLLR RWE+YQSEEEAALGRGKR RKAVSYRE YAP   ET N++G
Sbjct: 1352 EDNAVNGNEENEWDKLLRARWEKYQSEEEAALGRGKRQRKAVSYREVYAPHPSETMNESG 1411

Query: 182  A--AXXXXXXXXXXYTPAGRALKMKFAKLRARQKDRLARMKTFRESLPVE 325
                          YTPAGRA K K+ KLRARQK+RLAR+K  +ES PVE
Sbjct: 1412 GEEEKEPEPEPEREYTPAGRAFKAKYGKLRARQKERLARIKAIKESNPVE 1461


>ref|XP_002329920.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222871157|gb|EEF08288.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2332

 Score =  132 bits (332), Expect = 3e-29
 Identities = 71/116 (61%), Positives = 86/116 (74%), Gaps = 7/116 (6%)
 Frame = +2

Query: 2    EDNSGNVSEENEWDKLLRVRWERYQSEEEAALGRGKRVRKAVSYREAYAPQTIETSNQNG 181
            EDN  NV+EENEWD+LLR+RWE+YQ+EEEAALGRGKR+RKAVSYREAYAP   ET N++G
Sbjct: 1356 EDNVVNVTEENEWDRLLRLRWEKYQNEEEAALGRGKRLRKAVSYREAYAPHPNETLNESG 1415

Query: 182  AA--XXXXXXXXXXYTPAGRALKMKFAKLRARQKDRLAR---MKTFR--ESLPVED 328
                          YTPAGRALK K+ KLR+RQK+RLA+   ++ FR  E LPV +
Sbjct: 1416 GEEDQEPEAEPEREYTPAGRALKAKYTKLRSRQKERLAQRNAIEVFRPNEGLPVRE 1471


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