BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027549
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM65969.1| unknown [Arabidopsis thaliana]                         116   5e-24
ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabi...   115   7e-24
ref|NP_563854.1| DNA polymerase delta subunit 4 [Arabidopsis tha...   115   1e-23
ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus comm...   111   2e-22
ref|XP_002325451.1| predicted protein [Populus trichocarpa] gi|2...   109   5e-22

>gb|AAM65969.1| unknown [Arabidopsis thaliana]
          Length = 124

 Score =  116 bits (290), Expect = 5e-24
 Identities = 59/124 (47%), Positives = 76/124 (61%), Gaps = 2/124 (1%)
 Frame = +1

Query: 46  SSSADMKGFYKQKKKN--AGIXXXXXXXXXXXXXXXXXFGAGNAQPPALVAHGSFDLQEG 219
           +++ ++KGFYKQ K N   GI                  G+   QP AL++HGS DL E 
Sbjct: 3   TTAKNLKGFYKQTKSNITGGISKSKPSSRKVAPKHAAAQGSDVTQPAALISHGSVDLNED 62

Query: 220 RDVTEEVLRQFDMNMAYGPCVGMKRMDRWQRAASLGLNPPKDVHRLLTTAANEVCSDSLW 399
            D  EE+LRQFDMN+ YGPC+GM R+DRWQRA  LG+NPP ++ +LL T   +V  D LW
Sbjct: 63  YDKEEEMLRQFDMNITYGPCLGMTRLDRWQRAVRLGMNPPNEIEKLLKT--GKVQQDCLW 120

Query: 400 DGRV 411
            GRV
Sbjct: 121 QGRV 124


>ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabidopsis lyrata subsp.
           lyrata] gi|297335614|gb|EFH66031.1| DNA polymerase delta
           subunit 4 family [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score =  115 bits (289), Expect = 7e-24
 Identities = 59/123 (47%), Positives = 76/123 (61%), Gaps = 2/123 (1%)
 Frame = +1

Query: 49  SSADMKGFYKQKKKN--AGIXXXXXXXXXXXXXXXXXFGAGNAQPPALVAHGSFDLQEGR 222
           ++ ++KGFYKQ K N   GI                  G+   QP AL++HGS DL E  
Sbjct: 2   ATKNLKGFYKQTKSNITGGISKSKPSSRKVTPKHAAAQGSDVIQPAALISHGSLDLNEDY 61

Query: 223 DVTEEVLRQFDMNMAYGPCVGMKRMDRWQRAASLGLNPPKDVHRLLTTAANEVCSDSLWD 402
           D  EE+LRQFDMN+AYGPC+GM R+DRW+RA  LG+NPP ++ +LL T   +V  D LW 
Sbjct: 62  DKEEEMLRQFDMNIAYGPCLGMTRLDRWERALRLGMNPPNEIEKLLKT--GKVQQDCLWQ 119

Query: 403 GRV 411
           GRV
Sbjct: 120 GRV 122


>ref|NP_563854.1| DNA polymerase delta subunit 4 [Arabidopsis thaliana]
           gi|98961061|gb|ABF59014.1| At1g09815 [Arabidopsis
           thaliana] gi|332190377|gb|AEE28498.1| DNA polymerase
           delta subunit 4 [Arabidopsis thaliana]
          Length = 124

 Score =  115 bits (287), Expect = 1e-23
 Identities = 58/124 (46%), Positives = 76/124 (61%), Gaps = 2/124 (1%)
 Frame = +1

Query: 46  SSSADMKGFYKQKKKN--AGIXXXXXXXXXXXXXXXXXFGAGNAQPPALVAHGSFDLQEG 219
           +++ ++KGFYKQ K N   GI                  G+   QP AL++HGS DL E 
Sbjct: 3   TTAKNLKGFYKQTKSNITGGISKSKPSSRKVAPKHAAAQGSDVTQPAALISHGSVDLNED 62

Query: 220 RDVTEEVLRQFDMNMAYGPCVGMKRMDRWQRAASLGLNPPKDVHRLLTTAANEVCSDSLW 399
            D  EE+LRQFDMN+ YGPC+GM R+DRW+RA  LG+NPP ++ +LL T   +V  D LW
Sbjct: 63  YDKEEEMLRQFDMNITYGPCLGMTRLDRWERAVRLGMNPPNEIEKLLKT--GKVQQDCLW 120

Query: 400 DGRV 411
            GRV
Sbjct: 121 QGRV 124


>ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus communis]
           gi|223536760|gb|EEF38401.1| delta DNA polymerase,
           putative [Ricinus communis]
          Length = 126

 Score =  111 bits (277), Expect = 2e-22
 Identities = 63/125 (50%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
 Frame = +1

Query: 46  SSSADMKGFYKQKKKN-AGIXXXXXXXXXXXXXXXXX-FGAGNAQPPALVAHG-SFDLQE 216
           +S  DMK FY+QKK N  GI                   G+   QP AL++HG + DLQ+
Sbjct: 4   ASPNDMKSFYRQKKTNKTGITKSSSKSKKKSPPKHAAAIGSNITQPTALISHGGALDLQD 63

Query: 217 GRDVTEEVLRQFDMNMAYGPCVGMKRMDRWQRAASLGLNPPKDVHRLLTTAANEVCSDSL 396
             D  EEVLRQFDMNMAYGPC+GM R+ RW+RA  LGLNPPK +  LL     +V S+ L
Sbjct: 64  DYDKNEEVLRQFDMNMAYGPCLGMTRVGRWERAQRLGLNPPKQIEDLL--KGGKVNSECL 121

Query: 397 WDGRV 411
           WDGRV
Sbjct: 122 WDGRV 126


>ref|XP_002325451.1| predicted protein [Populus trichocarpa] gi|222862326|gb|EEE99832.1|
           predicted protein [Populus trichocarpa]
          Length = 121

 Score =  109 bits (273), Expect = 5e-22
 Identities = 58/120 (48%), Positives = 75/120 (62%)
 Frame = +1

Query: 46  SSSADMKGFYKQKKKNAGIXXXXXXXXXXXXXXXXXFGAGNAQPPALVAHGSFDLQEGRD 225
           ++S+ MKGFY+QKK  +GI                  G+   QP ALV+H S DL++  D
Sbjct: 3   TASSSMKGFYRQKKNKSGIRKPTSTSKSSLIHAAT-LGSDITQPTALVSHDSPDLKDDYD 61

Query: 226 VTEEVLRQFDMNMAYGPCVGMKRMDRWQRAASLGLNPPKDVHRLLTTAANEVCSDSLWDG 405
             E+VLRQFDMN AYGPC+GM R+ RW+RA  LGLNPPK++  LL     +V S+ LWDG
Sbjct: 62  KHEDVLRQFDMNPAYGPCLGMSRLARWERAQRLGLNPPKEIEGLL--KGEKVRSECLWDG 119