BLASTX nr result

ID: Atractylodes21_contig00027526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027526
         (891 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267888.1| PREDICTED: uncharacterized protein LOC100248...   225   1e-56
ref|XP_002315026.1| predicted protein [Populus trichocarpa] gi|2...   223   5e-56
ref|NP_177102.1| uncharacterized protein [Arabidopsis thaliana] ...   219   7e-55
ref|XP_002887236.1| predicted protein [Arabidopsis lyrata subsp....   219   7e-55
ref|XP_003607775.1| ATP synthase subunit beta [Medicago truncatu...   218   1e-54

>ref|XP_002267888.1| PREDICTED: uncharacterized protein LOC100248804 [Vitis vinifera]
          Length = 347

 Score =  225 bits (573), Expect = 1e-56
 Identities = 117/168 (69%), Positives = 137/168 (81%)
 Frame = -2

Query: 506 GPDLQTFEQELSDHVARSDHVFQSTSALEILRETVRILRYNLSGFMAIGALLICPVSAVL 327
           G +L+ ++       A SD +    +AL+ILRETV ILRYN SGFM I ALLICPVSA+L
Sbjct: 18  GLELEPYDYSNGTGSAGSDPM----NALQILRETVWILRYNSSGFMLIAALLICPVSALL 73

Query: 326 LSNVLVDQSIVKRLAIRLLLIAKSSGLPLRPFVEHSCQKFSEMAVSTTMCFPLYITLLLM 147
           LSNVLVDQSIVKRL+IRLLL+A+SSGLPLRPF++ SCQKFSEMA+S   CFPLY T+ L+
Sbjct: 74  LSNVLVDQSIVKRLSIRLLLVARSSGLPLRPFIKQSCQKFSEMAISAATCFPLYFTISLL 133

Query: 146 SKAAVVYSVDCTYSRKKFVSSKLYVIIRKIWRRIVSTYLLVCTVIVGC 3
           SKAAVVYSVDC+YSRKKF SSK YVI+ KIWRR+VSTYL VC +IV C
Sbjct: 134 SKAAVVYSVDCSYSRKKFDSSKFYVIVVKIWRRLVSTYLWVCMLIVSC 181


>ref|XP_002315026.1| predicted protein [Populus trichocarpa] gi|222864066|gb|EEF01197.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score =  223 bits (568), Expect = 5e-56
 Identities = 116/165 (70%), Positives = 132/165 (80%)
 Frame = -2

Query: 497 LQTFEQELSDHVARSDHVFQSTSALEILRETVRILRYNLSGFMAIGALLICPVSAVLLSN 318
           LQ  E E SD   R +H F S SALEILRETVRILR N   FM I ALLICPVSA+LLSN
Sbjct: 16  LQNSELESSDFSDRHNHQFHSMSALEILRETVRILRCNSWSFMTIAALLICPVSAILLSN 75

Query: 317 VLVDQSIVKRLAIRLLLIAKSSGLPLRPFVEHSCQKFSEMAVSTTMCFPLYITLLLMSKA 138
           VLVDQSIVK+L++RLLL+AKSSGLPLRPF++ SC +FSEMAVS+ MCFPL+ITL L+S+A
Sbjct: 76  VLVDQSIVKKLSVRLLLVAKSSGLPLRPFIKQSCHRFSEMAVSSAMCFPLFITLSLLSRA 135

Query: 137 AVVYSVDCTYSRKKFVSSKLYVIIRKIWRRIVSTYLLVCTVIVGC 3
           AVVYSVDCTYS+K    SK  VI+ K WRR+VSTYL    VIVGC
Sbjct: 136 AVVYSVDCTYSKKNVDGSKFLVIVSKNWRRVVSTYLWSSLVIVGC 180


>ref|NP_177102.1| uncharacterized protein [Arabidopsis thaliana]
           gi|12597781|gb|AAG60093.1|AC073178_4 unknown protein
           [Arabidopsis thaliana] gi|61742552|gb|AAX55097.1|
           hypothetical protein At1g69430 [Arabidopsis thaliana]
           gi|71905467|gb|AAZ52711.1| hypothetical protein
           At1g69430 [Arabidopsis thaliana]
           gi|332196803|gb|AEE34924.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 350

 Score =  219 bits (558), Expect = 7e-55
 Identities = 116/180 (64%), Positives = 140/180 (77%), Gaps = 4/180 (2%)
 Frame = -2

Query: 530 LSTIAVHKGPD--LQTFEQELSDHV--ARSDHVFQSTSALEILRETVRILRYNLSGFMAI 363
           LS +  H G +  L+ FE E S     + SDH F S +ALEILRETVRILRYNL  FM I
Sbjct: 5   LSGMMNHGGSNSKLRKFEIESSSSSPSSSSDHKFHSMNALEILRETVRILRYNLGAFMLI 64

Query: 362 GALLICPVSAVLLSNVLVDQSIVKRLAIRLLLIAKSSGLPLRPFVEHSCQKFSEMAVSTT 183
             LLICPVSA+LL N+LVDQS+V  L +RLLL++KSSGLPL PFV +SCQKFSE AVS+ 
Sbjct: 65  ALLLICPVSAILLPNLLVDQSVVNSLTVRLLLVSKSSGLPLLPFVRNSCQKFSETAVSSA 124

Query: 182 MCFPLYITLLLMSKAAVVYSVDCTYSRKKFVSSKLYVIIRKIWRRIVSTYLLVCTVIVGC 3
           MCFPL+ITL L+S+AAVVYSVDCTYSRKK V +K  VI++++W+R+V TYL +CTVIV C
Sbjct: 125 MCFPLFITLSLLSRAAVVYSVDCTYSRKKVVVTKFVVIMQRLWKRLVITYLWICTVIVVC 184


>ref|XP_002887236.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333077|gb|EFH63495.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 348

 Score =  219 bits (558), Expect = 7e-55
 Identities = 114/177 (64%), Positives = 137/177 (77%), Gaps = 1/177 (0%)
 Frame = -2

Query: 530 LSTIAVHKGPDLQTFEQELSDHVARS-DHVFQSTSALEILRETVRILRYNLSGFMAIGAL 354
           LS +    G   + FE E S   + S DH F S +ALEILRETVRILRYNL  FM I  L
Sbjct: 6   LSGMMNQGGSKFRKFEIESSSSSSSSSDHQFHSMNALEILRETVRILRYNLGAFMLIALL 65

Query: 353 LICPVSAVLLSNVLVDQSIVKRLAIRLLLIAKSSGLPLRPFVEHSCQKFSEMAVSTTMCF 174
           LICPVSA+LL N+LVDQS+V  L +RLLL++KSSGLPL PFV +SCQKFSE AVS+ MCF
Sbjct: 66  LICPVSAILLPNLLVDQSVVNSLTVRLLLVSKSSGLPLLPFVRNSCQKFSETAVSSAMCF 125

Query: 173 PLYITLLLMSKAAVVYSVDCTYSRKKFVSSKLYVIIRKIWRRIVSTYLLVCTVIVGC 3
           PL+ITL L+S+AAVVYSVDCTYSRKK V +K  VI++++W+R+V TYL +CTVIV C
Sbjct: 126 PLFITLSLLSRAAVVYSVDCTYSRKKVVITKFLVIMQRLWKRLVITYLWICTVIVVC 182


>ref|XP_003607775.1| ATP synthase subunit beta [Medicago truncatula]
           gi|355508830|gb|AES89972.1| ATP synthase subunit beta
           [Medicago truncatula]
          Length = 409

 Score =  218 bits (556), Expect = 1e-54
 Identities = 115/189 (60%), Positives = 141/189 (74%), Gaps = 5/189 (2%)
 Frame = -2

Query: 554 SPNGPSPRLSTIAVHK-GPD----LQTFEQELSDHVARSDHVFQSTSALEILRETVRILR 390
           S  G SPR+    + K G D     Q  E ELSDH    +H  QS +AL+ILRET+RILR
Sbjct: 4   SSGGCSPRIRVDHLKKDGSDETRLRQALELELSDH----NHEIQSMNALDILRETIRILR 59

Query: 389 YNLSGFMAIGALLICPVSAVLLSNVLVDQSIVKRLAIRLLLIAKSSGLPLRPFVEHSCQK 210
           +N   FM I  LLICPVSAVLLSNVLVD+SIVK L IRL+L+A++SGLPLRP ++ SCQ+
Sbjct: 60  FNSWAFMIIAFLLICPVSAVLLSNVLVDESIVKNLTIRLMLVAETSGLPLRPMIKQSCQR 119

Query: 209 FSEMAVSTTMCFPLYITLLLMSKAAVVYSVDCTYSRKKFVSSKLYVIIRKIWRRIVSTYL 30
           F++  +++ MCFPLY TLLL+SK AVVYSVDCTYSRKKF  SK  VI+ K WR+I++TY+
Sbjct: 120 FADTVIASAMCFPLYATLLLLSKTAVVYSVDCTYSRKKFDGSKFCVIVAKFWRKILATYM 179

Query: 29  LVCTVIVGC 3
             CTVIVGC
Sbjct: 180 WACTVIVGC 188


Top