BLASTX nr result

ID: Atractylodes21_contig00027511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027511
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622970.1| Pantothenate synthetase [Medicago truncatula...    60   2e-09
ref|XP_003621666.1| hypothetical protein MTR_7g021480 [Medicago ...    60   2e-08
gb|ABN08132.1| Putative non-LTR retroelement reverse transcripta...    53   7e-08
ref|XP_003602480.1| hypothetical protein MTR_3g094820 [Medicago ...    55   5e-07
emb|CAN63016.1| hypothetical protein VITISV_017409 [Vitis vinifera]    57   1e-06

>ref|XP_003622970.1| Pantothenate synthetase [Medicago truncatula]
           gi|355497985|gb|AES79188.1| Pantothenate synthetase
           [Medicago truncatula]
          Length = 551

 Score = 59.7 bits (143), Expect(2) = 2e-09
 Identities = 27/57 (47%), Positives = 37/57 (64%)
 Frame = +3

Query: 27  VGDGGNTLFWQEKWLGDFCLRDKFPRLWCLERRKEAIVRDRVLRAEGVRRCSWEWGR 197
           VG+G NT FW+++W+GD  L   FPRL+ +  +KE  VRD  +  EGVRR +  W R
Sbjct: 129 VGNGSNTSFWKDRWIGDLLLCVAFPRLFVISSQKEVKVRDVSVMQEGVRRWNLVWRR 185



 Score = 26.9 bits (58), Expect(2) = 2e-09
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +2

Query: 224 VGGLNSLMEGVDLEAGMKDKWAWSLDSKGRFSVK 325
           +  L + +EG+ L    +D WAW+ +  G+FSV+
Sbjct: 195 ISTLVASIEGITL-GNDEDDWAWTPEEGGKFSVR 227


>ref|XP_003621666.1| hypothetical protein MTR_7g021480 [Medicago truncatula]
           gi|355496681|gb|AES77884.1| hypothetical protein
           MTR_7g021480 [Medicago truncatula]
          Length = 158

 Score = 59.7 bits (143), Expect(2) = 2e-08
 Identities = 29/67 (43%), Positives = 38/67 (56%)
 Frame = +3

Query: 3   FSSSFGKKVGDGGNTLFWQEKWLGDFCLRDKFPRLWCLERRKEAIVRDRVLRAEGVRRCS 182
           F  +  + VGDG NTLFW ++W+GD  LR KFPRL+ L   KE  V +   R  G    +
Sbjct: 17  FEENIRRVVGDGRNTLFWYDRWIGDLLLRLKFPRLFDLAVEKECSVGEMEGRGLGSDGGA 76

Query: 183 WEWGREV 203
           W W R +
Sbjct: 77  WVWRRRL 83



 Score = 23.9 bits (50), Expect(2) = 2e-08
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +2

Query: 242 LMEGVDLEAGMKDKWAWSLDSKGRFSVK 325
           L+  + L+  ++D W W LD    ++V+
Sbjct: 97  LLHNIVLQDSVRDTWQWLLDPVHGYTVR 124


>gb|ABN08132.1| Putative non-LTR retroelement reverse transcriptase, related
           [Medicago truncatula]
          Length = 532

 Score = 52.8 bits (125), Expect(2) = 7e-08
 Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = +3

Query: 3   FSSSFGKKVGDGGNTLFWQEKWLGDFCLRDKFPRLWCLERRKEAIVRDRVLR--AEGVRR 176
           F  +  + VGDG NT FW + W+G+  L  KFPRL+ L   KE  V + V    AEG R 
Sbjct: 234 FDENIRRVVGDGNNTFFWYDSWVGEMPLCTKFPRLFDLAVNKECSVGEMVTLGWAEGGR- 292

Query: 177 CSWEWGR 197
            +W W R
Sbjct: 293 -AWVWRR 298



 Score = 28.5 bits (62), Expect(2) = 7e-08
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 242 LMEGVDLEAGMKDKWAWSLDSKGRFSVK 325
           L+  V L+  + DKW+W LD    +SV+
Sbjct: 314 LLHNVVLQVNVPDKWSWLLDPINGYSVR 341


>ref|XP_003602480.1| hypothetical protein MTR_3g094820 [Medicago truncatula]
           gi|355491528|gb|AES72731.1| hypothetical protein
           MTR_3g094820 [Medicago truncatula]
          Length = 220

 Score = 55.1 bits (131), Expect(2) = 5e-07
 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
 Frame = +3

Query: 3   FSSSFGKKVGDGGNTLFWQEKWLGDFCLRDKFPRLWCLERRKEAIVRDRVLRAEGV---R 173
           F+S   ++VG+G NT FW+ KW GD   + K+PRL+ L  +KEA + D V   E     R
Sbjct: 18  FTSELRRRVGNGLNTSFWKVKWCGDMPFKLKYPRLYSLSSQKEAPIGDLVSDGEWTFLWR 77

Query: 174 RCSWEWGREVRGRTQGELEG 233
           R  + W   +      +LEG
Sbjct: 78  RTLFVWEDHLAVELLADLEG 97



 Score = 23.5 bits (49), Expect(2) = 5e-07
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 275 KDKWAWSLDSKGRFSVK 325
           +D+W W L   G F+VK
Sbjct: 104 EDRWRWELKDFGIFTVK 120


>emb|CAN63016.1| hypothetical protein VITISV_017409 [Vitis vinifera]
          Length = 873

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/82 (42%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
 Frame = +3

Query: 15  FGKKVGDGGNTLFWQEKWLGDFCLRDKFPRLWCLERRKEAIVRDRVLRAEGVRRCSW--- 185
           FG +VGDG N  FW++KW G   L + FP L+ +   KEA V + V  AEG RR SW   
Sbjct: 228 FGYEVGDGKNVRFWKDKWCGTSLLSEAFPSLFSIATSKEAWVNE-VWTAEGDRRGSWTPT 286

Query: 186 ------EWGREVRGRTQGELEG 233
                 +W  E  GR    LEG
Sbjct: 287 FNRPFNDWELEEVGRLLRCLEG 308


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