BLASTX nr result
ID: Atractylodes21_contig00026959
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00026959
(1238 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containi... 483 e-134
ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containi... 481 e-133
ref|XP_002532046.1| pentatricopeptide repeat-containing protein,... 478 e-132
ref|XP_003532845.1| PREDICTED: pentatricopeptide repeat-containi... 476 e-132
ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containi... 475 e-131
>ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Vitis vinifera]
gi|296082481|emb|CBI21486.3| unnamed protein product
[Vitis vinifera]
Length = 489
Score = 483 bits (1244), Expect = e-134
Identities = 241/316 (76%), Positives = 277/316 (87%)
Frame = -3
Query: 1236 EMRNSGCRPDTSVYNALITAHLHSKDKHKALSKALGYFDKMKGTERCKPSIVTYNILLRA 1057
EMRNSGCRPDTSVYNALITAHLHS+DK KAL KALGYFDKMKG ERCKP+IVTYNILLRA
Sbjct: 159 EMRNSGCRPDTSVYNALITAHLHSRDKSKALIKALGYFDKMKGMERCKPNIVTYNILLRA 218
Query: 1056 SAQARNVAQVEALFKDLEESVATPDIFTFNGVMDAYGKNGMIGEMEGVLARMKSNQIKPD 877
AQA+NV Q ALFK+L ES+ +PDIFTFNGVMDAYGKNGMI EME VL+RMKSNQ KPD
Sbjct: 219 FAQAQNVNQANALFKELNESIVSPDIFTFNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 278
Query: 876 IISYNLLIDSYGRKQEFEKMEQVFKSLLRSKERPTLSTFNSMITNYGKARLRDKADLVFQ 697
II++N+LIDSYGR+QEF+KMEQVFKSLLRSKE+PTL TFNSMITNYGKARL++KA+ VF+
Sbjct: 279 IITFNVLIDSYGRRQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLKEKAENVFK 338
Query: 696 KITDMGCTPNFITYECMIMMYGCCDCVSRAREIYDKMIESEKFVKVSTLNVMLNVYCLNG 517
K+TDMG PNFITYE +IMMYG CDC+SRAREI+D+M+ S+K +KVSTLN ML VYC+NG
Sbjct: 339 KMTDMGYAPNFITYESLIMMYGFCDCISRAREIFDEMMASKKEMKVSTLNAMLEVYCMNG 398
Query: 516 LPMEADRLFETACNSKMFHVDSSTYKLLYKSYTKANMKELLQKLLKHMDRNGIVPNKRFF 337
LPMEAD L E A ++ F SSTYKLLYK+YTKA+ KELL+KLLK MD +GI+PNKRFF
Sbjct: 399 LPMEADLLLERARKNRPF-PGSSTYKLLYKAYTKADQKELLEKLLKLMDSDGILPNKRFF 457
Query: 336 LDALGVLGSSLDDRDS 289
L+ALG GSS ++S
Sbjct: 458 LEALGAFGSSPASQES 473
Score = 67.0 bits (162), Expect = 9e-09
Identities = 58/301 (19%), Positives = 132/301 (43%), Gaps = 7/301 (2%)
Frame = -3
Query: 1230 RNSGCRPDTSVYNALITAHLHSKDKHKALSKALGYFDKMKGTERCKPSIVTYNILLRASA 1051
R G +PD S L+ + + + L L + K+ TE C + +
Sbjct: 57 RKPGPKPDKSEVEELVRVLMKNFGGERPLISTLNKYVKVIRTEHC------FRLFEELGK 110
Query: 1050 QARNVAQVEALFKDLEESVATPDIFTFNGVMDAYGKNGMIGEMEGVLARMKSNQIKPDII 871
+ + +E ++ D ++ ++ GK G + + M+++ +PD
Sbjct: 111 TDKWLQCLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTS 170
Query: 870 SYNLLIDSYGRKQEFEKMEQVFKSL-----LRSKER--PTLSTFNSMITNYGKARLRDKA 712
YN LI ++ + +K + + K+L ++ ER P + T+N ++ + +A+ ++A
Sbjct: 171 VYNALITAHLHSR--DKSKALIKALGYFDKMKGMERCKPNIVTYNILLRAFAQAQNVNQA 228
Query: 711 DLVFQKITDMGCTPNFITYECMIMMYGCCDCVSRAREIYDKMIESEKFVKVSTLNVMLNV 532
+ +F+++ + +P+ T+ ++ YG + + +M ++ + T NV+++
Sbjct: 229 NALFKELNESIVSPDIFTFNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNVLIDS 288
Query: 531 YCLNGLPMEADRLFETACNSKMFHVDSSTYKLLYKSYTKANMKELLQKLLKHMDRNGIVP 352
Y + +++F++ SK T+ + +Y KA +KE + + K M G P
Sbjct: 289 YGRRQEFDKMEQVFKSLLRSKE-KPTLPTFNSMITNYGKARLKEKAENVFKKMTDMGYAP 347
Query: 351 N 349
N
Sbjct: 348 N 348
>ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Glycine max]
Length = 503
Score = 481 bits (1239), Expect = e-133
Identities = 237/329 (72%), Positives = 283/329 (86%)
Frame = -3
Query: 1236 EMRNSGCRPDTSVYNALITAHLHSKDKHKALSKALGYFDKMKGTERCKPSIVTYNILLRA 1057
EMRN+GCRPDTSVYNALITAHLHS+DK KAL+KA+GYF KMKG ERCKP+IVTYNILLRA
Sbjct: 134 EMRNTGCRPDTSVYNALITAHLHSRDKTKALAKAIGYFQKMKGMERCKPNIVTYNILLRA 193
Query: 1056 SAQARNVAQVEALFKDLEESVATPDIFTFNGVMDAYGKNGMIGEMEGVLARMKSNQIKPD 877
AQARNV QV +LFKDL+ES+ +PDI+TFNGVMDAYGKNGMI EME VLARMKSNQ KPD
Sbjct: 194 FAQARNVEQVNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIREMEAVLARMKSNQCKPD 253
Query: 876 IISYNLLIDSYGRKQEFEKMEQVFKSLLRSKERPTLSTFNSMITNYGKARLRDKADLVFQ 697
+I++NLLIDSYG+KQEF KMEQVFKSLLRSKER +L TFNSMI NYGKARL+DKA+ VF+
Sbjct: 254 LITFNLLIDSYGKKQEFGKMEQVFKSLLRSKERASLPTFNSMILNYGKARLKDKAEDVFK 313
Query: 696 KITDMGCTPNFITYECMIMMYGCCDCVSRAREIYDKMIESEKFVKVSTLNVMLNVYCLNG 517
++TDMG TP+F+T+E +I MYG CDCVSRA +++D+++ES+ +KVSTLN ML+VYC+NG
Sbjct: 314 RMTDMGYTPSFVTHESLIYMYGFCDCVSRAAQLFDELVESKAHIKVSTLNAMLDVYCING 373
Query: 516 LPMEADRLFETACNSKMFHVDSSTYKLLYKSYTKANMKELLQKLLKHMDRNGIVPNKRFF 337
LP EAD LFE A NS + DSST+KLLYK+YTKAN KELL KLLKHMD++GIVPNKRFF
Sbjct: 374 LPQEADSLFERA-NSIKIYPDSSTFKLLYKAYTKANQKELLDKLLKHMDKDGIVPNKRFF 432
Query: 336 LDALGVLGSSLDDRDSIATKVNSRMAAAD 250
LDALG + S + +S +S+ A ++
Sbjct: 433 LDALGAVASLPANSESANAATDSKTANSE 461
>ref|XP_002532046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528289|gb|EEF30336.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 478
Score = 478 bits (1229), Expect = e-132
Identities = 238/309 (77%), Positives = 272/309 (88%)
Frame = -3
Query: 1236 EMRNSGCRPDTSVYNALITAHLHSKDKHKALSKALGYFDKMKGTERCKPSIVTYNILLRA 1057
EMRNSGCRPD+SVYNALITAHLHSKDK KAL KALGYF+KMKG +RC+P++VTYNILLRA
Sbjct: 157 EMRNSGCRPDSSVYNALITAHLHSKDKAKALIKALGYFEKMKGMQRCQPNVVTYNILLRA 216
Query: 1056 SAQARNVAQVEALFKDLEESVATPDIFTFNGVMDAYGKNGMIGEMEGVLARMKSNQIKPD 877
AQARNV QV ALFKDL++S+ +PDI+T+NGVMDAYGKNGMI EME VL+RMKSNQ KPD
Sbjct: 217 FAQARNVNQVNALFKDLDQSIVSPDIYTYNGVMDAYGKNGMIREMESVLSRMKSNQCKPD 276
Query: 876 IISYNLLIDSYGRKQEFEKMEQVFKSLLRSKERPTLSTFNSMITNYGKARLRDKADLVFQ 697
II++NLLIDSYG+KQ+F+KMEQVFKSLL SKERPTL TFNSMITNYGKAR ++ A+ V Q
Sbjct: 277 IITFNLLIDSYGKKQDFDKMEQVFKSLLHSKERPTLPTFNSMITNYGKARQKENAESVLQ 336
Query: 696 KITDMGCTPNFITYECMIMMYGCCDCVSRAREIYDKMIESEKFVKVSTLNVMLNVYCLNG 517
K+T M TPNFITYE +IMMYG CD VS+AREI+D MIES K VKVSTLN ML+VYCLNG
Sbjct: 337 KMTKMKYTPNFITYESLIMMYGFCDSVSKAREIFDDMIESGKEVKVSTLNAMLDVYCLNG 396
Query: 516 LPMEADRLFETACNSKMFHVDSSTYKLLYKSYTKANMKELLQKLLKHMDRNGIVPNKRFF 337
LPMEAD LF+ A N + DS+TYKLLYK+YTKANMK+L+QKLLKHMDR+GI+PNKRFF
Sbjct: 397 LPMEADLLFDNARNVGLL-PDSTTYKLLYKAYTKANMKKLVQKLLKHMDRDGIIPNKRFF 455
Query: 336 LDALGVLGS 310
LDALG S
Sbjct: 456 LDALGAFKS 464
Score = 57.0 bits (136), Expect = 1e-05
Identities = 43/219 (19%), Positives = 103/219 (47%), Gaps = 7/219 (3%)
Frame = -3
Query: 984 DIFTFNGVMDAYGKNGMIGEMEGVLARMKSNQIKPDIISYNLLIDSYGRKQEFEKMEQVF 805
D ++ ++ GK G + + M+++ +PD YN LI ++ + +K + +
Sbjct: 131 DSGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDSSVYNALITAHLHSK--DKAKALI 188
Query: 804 KSL-----LRSKER--PTLSTFNSMITNYGKARLRDKADLVFQKITDMGCTPNFITYECM 646
K+L ++ +R P + T+N ++ + +AR ++ + +F+ + +P+ TY +
Sbjct: 189 KALGYFEKMKGMQRCQPNVVTYNILLRAFAQARNVNQVNALFKDLDQSIVSPDIYTYNGV 248
Query: 645 IMMYGCCDCVSRAREIYDKMIESEKFVKVSTLNVMLNVYCLNGLPMEADRLFETACNSKM 466
+ YG + + +M ++ + T N++++ Y + +++F++ +SK
Sbjct: 249 MDAYGKNGMIREMESVLSRMKSNQCKPDIITFNLLIDSYGKKQDFDKMEQVFKSLLHSKE 308
Query: 465 FHVDSSTYKLLYKSYTKANMKELLQKLLKHMDRNGIVPN 349
T+ + +Y KA KE + +L+ M + PN
Sbjct: 309 -RPTLPTFNSMITNYGKARQKENAESVLQKMTKMKYTPN 346
>ref|XP_003532845.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Glycine max]
Length = 580
Score = 476 bits (1225), Expect = e-132
Identities = 236/329 (71%), Positives = 280/329 (85%)
Frame = -3
Query: 1236 EMRNSGCRPDTSVYNALITAHLHSKDKHKALSKALGYFDKMKGTERCKPSIVTYNILLRA 1057
EMRN+GCRPDTSVYNALITAHL S+DK KAL+KA+GYF KMKG ERCKP+IVTYNILLRA
Sbjct: 197 EMRNTGCRPDTSVYNALITAHLRSRDKIKALAKAIGYFQKMKGMERCKPNIVTYNILLRA 256
Query: 1056 SAQARNVAQVEALFKDLEESVATPDIFTFNGVMDAYGKNGMIGEMEGVLARMKSNQIKPD 877
AQARNV QV +LFKDL+ES+ +PDI+TFNGVMDAYGKNGMI EME VLARMKSNQ KPD
Sbjct: 257 FAQARNVEQVNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIREMEAVLARMKSNQCKPD 316
Query: 876 IISYNLLIDSYGRKQEFEKMEQVFKSLLRSKERPTLSTFNSMITNYGKARLRDKADLVFQ 697
+I++NLLIDSYG+KQ F KMEQVFKSLL SKERP+L TFNSMI NYGKARL+DKA+ VF+
Sbjct: 317 LITFNLLIDSYGKKQAFGKMEQVFKSLLHSKERPSLPTFNSMILNYGKARLKDKAEDVFK 376
Query: 696 KITDMGCTPNFITYECMIMMYGCCDCVSRAREIYDKMIESEKFVKVSTLNVMLNVYCLNG 517
K+TDMG T +F+T+E MI MYG CDCVSRA +++D+++ES+ +KVSTLN ML+VYCLNG
Sbjct: 377 KMTDMGYTLSFVTHESMIYMYGFCDCVSRAAQLFDELVESKVHIKVSTLNAMLDVYCLNG 436
Query: 516 LPMEADRLFETACNSKMFHVDSSTYKLLYKSYTKANMKELLQKLLKHMDRNGIVPNKRFF 337
LP EAD LFE A + K+ H DSST+KLLYK+YTKAN KELL KLLKHMD++GI+PNKRFF
Sbjct: 437 LPQEADSLFERAISIKI-HPDSSTFKLLYKAYTKANQKELLDKLLKHMDKDGIIPNKRFF 495
Query: 336 LDALGVLGSSLDDRDSIATKVNSRMAAAD 250
LDALG + S + +S +S A ++
Sbjct: 496 LDALGAVASLPANSESANAATDSNTANSE 524
Score = 59.7 bits (143), Expect = 1e-06
Identities = 56/284 (19%), Positives = 131/284 (46%), Gaps = 8/284 (2%)
Frame = -3
Query: 1188 LITAHLHSKDKHKALSKALGYFDKMKGTERCKPSIVTYNILLRASAQARNVAQVEALFKD 1009
L+T+ + S DK + L K L + K T+ C +L + N Q +F+
Sbjct: 110 LLTSKIRSNDK-EVLLKTLNKYVKQVRTQHCF-------LLFEELGKHDNWLQCLEVFRW 161
Query: 1008 LEESV-ATPDIFTFNGVMDAYGKNGMIGEMEGVLARMKSNQIKPDIISYNLLIDSYGRKQ 832
+++ D ++ ++ GK G + + M++ +PD YN LI ++ R +
Sbjct: 162 MQKQRWYIADNGIYSKLISVMGKKGQTRMAMWLFSEMRNTGCRPDTSVYNALITAHLRSR 221
Query: 831 EFEKMEQVFKSL-----LRSKER--PTLSTFNSMITNYGKARLRDKADLVFQKITDMGCT 673
+K++ + K++ ++ ER P + T+N ++ + +AR ++ + +F+ + + +
Sbjct: 222 --DKIKALAKAIGYFQKMKGMERCKPNIVTYNILLRAFAQARNVEQVNSLFKDLDESIVS 279
Query: 672 PNFITYECMIMMYGCCDCVSRAREIYDKMIESEKFVKVSTLNVMLNVYCLNGLPMEADRL 493
P+ T+ ++ YG + + +M ++ + T N++++ Y + +++
Sbjct: 280 PDIYTFNGVMDAYGKNGMIREMEAVLARMKSNQCKPDLITFNLLIDSYGKKQAFGKMEQV 339
Query: 492 FETACNSKMFHVDSSTYKLLYKSYTKANMKELLQKLLKHMDRNG 361
F++ +SK T+ + +Y KA +K+ + + K M G
Sbjct: 340 FKSLLHSKE-RPSLPTFNSMILNYGKARLKDKAEDVFKKMTDMG 382
>ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Cucumis sativus]
Length = 528
Score = 475 bits (1222), Expect = e-131
Identities = 239/332 (71%), Positives = 281/332 (84%)
Frame = -3
Query: 1236 EMRNSGCRPDTSVYNALITAHLHSKDKHKALSKALGYFDKMKGTERCKPSIVTYNILLRA 1057
EMRNSGCRPDTSVYNALITAHLHSKDK KAL K L YF+KMKG ERCKP+IVTYNIL RA
Sbjct: 152 EMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRA 211
Query: 1056 SAQARNVAQVEALFKDLEESVATPDIFTFNGVMDAYGKNGMIGEMEGVLARMKSNQIKPD 877
AQA V QV LFKDL+ESV + DI+T+NGVMDAYGKNG I EME +LARMKSNQIKPD
Sbjct: 212 FAQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPD 271
Query: 876 IISYNLLIDSYGRKQEFEKMEQVFKSLLRSKERPTLSTFNSMITNYGKARLRDKADLVFQ 697
IIS+NLLIDSYG+KQ F+KMEQVFKSLLRSKERPTL TFNSMITNYGKARLR+KA+ VF+
Sbjct: 272 IISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFR 331
Query: 696 KITDMGCTPNFITYECMIMMYGCCDCVSRAREIYDKMIESEKFVKVSTLNVMLNVYCLNG 517
K+ DMG P+++T E +IMMYG CDCVS+AREI+D M+ S K V+VSTLN ML+VYC+NG
Sbjct: 332 KMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCING 391
Query: 516 LPMEADRLFETACNSKMFHVDSSTYKLLYKSYTKANMKELLQKLLKHMDRNGIVPNKRFF 337
LP+EAD LFE+A N ++F DS+TYKLLYK+YTKA+ KELL+KLLK+MD+ GI+PNKRFF
Sbjct: 392 LPLEADLLFESAGNMRVF-PDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFF 450
Query: 336 LDALGVLGSSLDDRDSIATKVNSRMAAADITK 241
LDALG +GSS + + T+ SR + + + K
Sbjct: 451 LDALGTIGSSQEKPEPARTRTGSRNSDSSVEK 482