BLASTX nr result

ID: Atractylodes21_contig00026925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026925
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285023.2| PREDICTED: uncharacterized protein LOC100267...    89   5e-16
emb|CBI28156.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_002524440.1| RNA binding protein, putative [Ricinus commu...    57   2e-06

>ref|XP_002285023.2| PREDICTED: uncharacterized protein LOC100267997 [Vitis vinifera]
          Length = 415

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 49/109 (44%), Positives = 65/109 (59%), Gaps = 4/109 (3%)
 Frame = -3

Query: 327 KDPNCNKVSKYNRDSGFLAKQRDAKGDFYRKDLCFDTQKNNHLMESHIVSSKTLKRASPY 148
           + P+      Y ++S F  ++ D +    RKD CF  + N    ES I SS+TLKR SP+
Sbjct: 142 RKPSGPPTHNYIQNSSFQVQEMDTRMKLSRKDNCFTVKNNADFPESRIASSRTLKRGSPF 201

Query: 147 GYSQGKANEGGAQKFRASEKEGRRLRVLGTS----PEKVDDVANSREML 13
           GYSQ +A  G AQKFR +EKEGR  R +  +    PEKV+ VA+ REML
Sbjct: 202 GYSQVEAYAGSAQKFRLTEKEGRLHRAVAANASLLPEKVEAVASPREML 250


>emb|CBI28156.3| unnamed protein product [Vitis vinifera]
          Length = 265

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/105 (38%), Positives = 58/105 (55%)
 Frame = -3

Query: 327 KDPNCNKVSKYNRDSGFLAKQRDAKGDFYRKDLCFDTQKNNHLMESHIVSSKTLKRASPY 148
           + P+      Y ++S F  ++ D +    RKD CF  + N    ES I SS+TLKR SP+
Sbjct: 142 RKPSGPPTHNYIQNSSFQVQEMDTRMKLSRKDNCFTVKNNADFPESRIASSRTLKRGSPF 201

Query: 147 GYSQGKANEGGAQKFRASEKEGRRLRVLGTSPEKVDDVANSREML 13
           GYSQ +A  G AQKFR +EKEGR  R +  +   + +   S  ++
Sbjct: 202 GYSQVEAYAGSAQKFRLTEKEGRLHRAVAANASLLPEKGQSMRLV 246


>ref|XP_002524440.1| RNA binding protein, putative [Ricinus communis]
           gi|223536228|gb|EEF37880.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 383

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
 Frame = -3

Query: 225 FDTQKNNHLMESHIVSSKTLKRASPYGYSQGKANEGGAQKFRASEKEGRRLRVLGTS--- 55
           F  +    L  S+IVS +TLKR  P GY Q +  +G AQKFRA EKEGR  RVL  +   
Sbjct: 146 FRMRNKETLKGSNIVSCRTLKRG-PCGYKQVETYDGAAQKFRAVEKEGRLHRVLAANQSS 204

Query: 54  -PEKVDDVANSREMLCDKD 1
             ++ DDVA  +EM+ +K+
Sbjct: 205 FAQQGDDVAFPKEMVGEKN 223


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