BLASTX nr result

ID: Atractylodes21_contig00026864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026864
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA40555.1| TNP2 [Antirrhinum majus]                               55   1e-07
gb|ABA97917.2| retrotransposon protein, putative, Ty3-gypsy subc...    52   2e-07
ref|XP_002449672.1| hypothetical protein SORBIDRAFT_05g021440 [S...    52   8e-07
ref|NP_001059784.1| Os07g0516500 [Oryza sativa Japonica Group] g...    50   3e-06

>emb|CAA40555.1| TNP2 [Antirrhinum majus]
          Length = 752

 Score = 54.7 bits (130), Expect(2) = 1e-07
 Identities = 21/46 (45%), Positives = 32/46 (69%)
 Frame = +2

Query: 272 SGEIKCPCIKCANSVWVTREKATEHIVCNGIMKGYDTLIAHEEASS 409
           +G+I CPC +C N++W+ RE A EH++ +G +KGY   + H E SS
Sbjct: 38  NGKIICPCKQCKNALWMDRETAKEHLIIDGFIKGYTHWVIHGEGSS 83



 Score = 25.8 bits (55), Expect(2) = 1e-07
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 67  MNTSWMSEARSSTLFLKGLGEFLDLECKN 153
           M+ SWM ++R +  +  GL +FLD    N
Sbjct: 6   MDKSWMHKSRLTEEYENGLDQFLDFAFDN 34


>gb|ABA97917.2| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
           [Oryza sativa Japonica Group]
          Length = 1846

 Score = 51.6 bits (122), Expect(2) = 2e-07
 Identities = 21/45 (46%), Positives = 28/45 (62%)
 Frame = +2

Query: 278 EIKCPCIKCANSVWVTREKATEHIVCNGIMKGYDTLIAHEEASST 412
           +I CPC KC NS W  R    E ++C+G +KGY T + H E SS+
Sbjct: 35  KILCPCRKCVNSSWKNRSDIREDLICDGFVKGYRTWMFHGETSSS 79



 Score = 28.5 bits (62), Expect(2) = 2e-07
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +1

Query: 67  MNTSWMSEARSSTLFLKGLGEFLDLECKNNA 159
           M+ +WM E R + ++++G+  FLD     +A
Sbjct: 1   MDKAWMDEPRHTQIYIQGVDNFLDFAFSKSA 31


>ref|XP_002449672.1| hypothetical protein SORBIDRAFT_05g021440 [Sorghum bicolor]
           gi|241935515|gb|EES08660.1| hypothetical protein
           SORBIDRAFT_05g021440 [Sorghum bicolor]
          Length = 719

 Score = 52.0 bits (123), Expect(2) = 8e-07
 Identities = 21/45 (46%), Positives = 28/45 (62%)
 Frame = +2

Query: 278 EIKCPCIKCANSVWVTREKATEHIVCNGIMKGYDTLIAHEEASST 412
           +I CPC  C NS W  R    EH++C+G M+GY T + H E SS+
Sbjct: 35  QILCPCKACKNSCWRIRSIVLEHLICDGFMEGYITWVNHGEPSSS 79



 Score = 25.8 bits (55), Expect(2) = 8e-07
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +1

Query: 67  MNTSWMSEARSSTLFLKGLGEFLDLECKNNA 159
           M+ +WM + R + ++ +G+  FL+    N+A
Sbjct: 1   MDKTWMDQPRQTLVYREGVDMFLEFAFSNSA 31


>ref|NP_001059784.1| Os07g0516500 [Oryza sativa Japonica Group]
           gi|113611320|dbj|BAF21698.1| Os07g0516500 [Oryza sativa
           Japonica Group] gi|125605476|gb|EAZ44512.1| hypothetical
           protein OsJ_29130 [Oryza sativa Japonica Group]
           gi|215712374|dbj|BAG94501.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215767417|dbj|BAG99645.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 294

 Score = 50.4 bits (119), Expect(2) = 3e-06
 Identities = 19/47 (40%), Positives = 27/47 (57%)
 Frame = +2

Query: 272 SGEIKCPCIKCANSVWVTREKATEHIVCNGIMKGYDTLIAHEEASST 412
           +  I CPC  C N  W+   K  EH++C+G + GY + I H E+ ST
Sbjct: 33  NNRIICPCKNCGNRYWLGEHKVREHLICDGFLAGYTSWIHHGESMST 79



 Score = 25.4 bits (54), Expect(2) = 3e-06
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 67  MNTSWMSEARSSTLFLKGLGEFLDLECKNNA 159
           M+  WM  +RSS  +  G+ +F++    N+A
Sbjct: 1   MDKDWMKTSRSSAEYNIGVDKFIEFALSNSA 31


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