BLASTX nr result

ID: Atractylodes21_contig00026815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026815
         (1022 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297869.1| predicted protein [Populus trichocarpa] gi|2...   185   2e-44
ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma...   183   5e-44
gb|AAV92930.1| putative transcription regulator CPL1 [Solanum ly...   170   6e-40
ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative ...   160   5e-37
ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   156   9e-36

>ref|XP_002297869.1| predicted protein [Populus trichocarpa] gi|222845127|gb|EEE82674.1|
            predicted protein [Populus trichocarpa]
          Length = 1117

 Score =  185 bits (469), Expect = 2e-44
 Identities = 122/328 (37%), Positives = 173/328 (52%), Gaps = 20/328 (6%)
 Frame = +2

Query: 95   PSPTRETTHPLPLGKALFVGDAEIRPEWPAPRGLLGTQNAVVHRYETDALKAVSTYQQKF 274
            PSPT+ETT P P+ + L +GD  +    P P+     +   +H YETDALKAVS+YQQKF
Sbjct: 250  PSPTQETT-PFPVQRLLAIGDGMVSSGLPVPKVTPVAEEPRMHPYETDALKAVSSYQQKF 308

Query: 275  GRSSFLSNDLPSPTPSEESGDAGGDCGGEVSSFSTAQNTNSITEAISEQRDIFSI----- 439
             R+SF +N+LPSPTPSEESG+  GD  GEVSS ST  N  ++   +S+Q++         
Sbjct: 309  NRNSFFTNELPSPTPSEESGNGDGDTAGEVSSSSTVVNYRTVNPPVSDQKNAPPSPPPLP 368

Query: 440  ---PHVERPNVQLLANARSAAPVYSTSSSVIXXXXXXXXXXXXLANSES-SLDCNQGTLP 607
               PH +  N++ +   R++APV S  SS I              N ++ +LD NQ  LP
Sbjct: 369  PPPPHPDSSNIRGVVPTRNSAPVSSGPSSTIKASAKSRDPRLRYVNIDACALDHNQRALP 428

Query: 608  LSSKQPAMETLDGLHGSRKQKTFDDPILVDGPAPKRLKNEFADSVNPRDIAAVSQTGGWS 787
            + +  P +E    + GS+K K  +D  ++D P+ KR +N F +    RDI +++ TGGW 
Sbjct: 429  MVNNLPRVEPAGAIVGSKKHKIEED--VLDDPSLKRQRNSFDNYGAVRDIESMTGTGGWL 486

Query: 788  EDRVPVGMQVSNR-----------TGNVISEARDLENVVTTSALPNTSSVHIPVTGVNPT 934
            ED      Q  N+           +GN  S    + N+        T S    VT    T
Sbjct: 487  EDTDMAEPQTVNKNQWAENSNVNGSGNAQSPFMGISNI--------TGSEQAQVTSTATT 538

Query: 935  SASLQSILKDIAVNPAPWMNLINMEQQK 1018
              SL  +LKDIAVNP   +N++ M QQ+
Sbjct: 539  --SLPDLLKDIAVNPTMLINILKMGQQQ 564


>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Vitis vinifera]
          Length = 1238

 Score =  183 bits (465), Expect = 5e-44
 Identities = 129/324 (39%), Positives = 173/324 (53%), Gaps = 15/324 (4%)
 Frame = +2

Query: 95   PSPTRETTHPLPLGKALFVGDAEIRPEWPAPRGLLGTQNAVVHRYETDALKAVSTYQQKF 274
            PSPT +     P+ K+  V  A++  E         TQ++++H YETDALKAVSTYQQKF
Sbjct: 392  PSPTGKAPQCFPVNKSELV-TAKVAHE---------TQDSIMHPYETDALKAVSTYQQKF 441

Query: 275  GRSSFLSND-LPSPTPSEESGDAGGDCGGEVSSFSTAQNTNSITEAISEQRDIFSIPHVE 451
            G +SFL  D LPSPTPSEESGD  GD  GEVSS ST     +          + S P ++
Sbjct: 442  GLTSFLPIDKLPSPTPSEESGDTYGDISGEVSSSSTISAPITANAPALGHPIVSSAPQMD 501

Query: 452  RPNVQLLANARSAAPVYS---TSSSVIXXXXXXXXXXXXLANSESSLDCNQGTLPLSSKQ 622
               VQ     R+ + V S     SSV+             ++   SLD N+  LP  S  
Sbjct: 502  SSIVQGPTVGRNTSLVSSGPHLDSSVVASAKSRDPRLRLASSDAGSLDLNERPLPAVSNS 561

Query: 623  PAMETLDGLHGSRKQKTFDDPILVDGPAPKRLKNEFADSVNPRDIAAVSQTGGWSEDRVP 802
            P ++ L  +  SRKQK+ ++P+L DGP  KR +N        RD   V  +GGW ED   
Sbjct: 562  PKVDPLGEIVSSRKQKSAEEPLL-DGPVTKRQRNGLTSPATVRDAQTVVASGGWLEDSNT 620

Query: 803  VGMQVSNRT---GNVISEARDLENVVTTSAL-------PNTSSVHIPVTGVNPTSASLQS 952
            V  Q+ NR     N  ++ + LE+ VT + +           + H+PV   + T+ASLQS
Sbjct: 621  VIPQMMNRNQLIENTGTDPKKLESKVTVTGIGCDKPYVTVNGNEHLPVVATS-TTASLQS 679

Query: 953  ILKDIAVNPAPWMNLIN-MEQQKA 1021
            +LKDIAVNPA WMN+ N +EQQK+
Sbjct: 680  LLKDIAVNPAVWMNIFNKVEQQKS 703


>gb|AAV92930.1| putative transcription regulator CPL1 [Solanum lycopersicum]
          Length = 1227

 Score =  170 bits (430), Expect = 6e-40
 Identities = 120/318 (37%), Positives = 173/318 (54%), Gaps = 9/318 (2%)
 Frame = +2

Query: 95   PSPTRETTHPLPLGKALFVGDAEIRPEWPAPRGLLGTQNAVVHRYETDALKAVSTYQQKF 274
            PSPTR+     P  +   +   ++ P +PA    L   N+++H YETDALKAVS+YQQKF
Sbjct: 354  PSPTRQIGPQFPATQTHGMVKLDL-PIFPAS---LDKGNSLLHPYETDALKAVSSYQQKF 409

Query: 275  GRSS-FLSNDLPSPTPSEESGDAGGDCGGEVSSFSTAQNTNSITEAISEQRDIFSIPHVE 451
            GRSS F+S +LPSPTPSEE     GD GGEV+SF    N + + E+   Q  + S+P   
Sbjct: 410  GRSSLFVSENLPSPTPSEEDDSGKGDTGGEVTSFDVVHNASHLNESSMGQPILSSVPQTN 469

Query: 452  RPNVQLLANARSAAPV-YSTSSSVIXXXXXXXXXXXXLANSESSLDCNQGTLPLSSKQPA 628
              + Q L   R+A P+ +  + S+             LA S++        LP+      
Sbjct: 470  ILDGQGLGTTRTADPLSFLPNPSLRSSTAKSRDPRLRLATSDTV--AQNTILPIPDIDLK 527

Query: 629  METLDGLHGSRKQKTFDDPILVDGPAPKRLKNEFADSVNPRDIAAVSQTGGWSEDRVPVG 808
            +E    +  S+KQKT D     D P PKR ++E  DS+   D+      GGW EDR    
Sbjct: 528  LEASLEMIVSKKQKTVDLSAF-DAPLPKRQRSEQTDSIIVSDVRPSIGNGGWLEDRGTAE 586

Query: 809  MQVSN---RTGNVISEARDLENVVTTSA-LPN---TSSVHIPVTGVNPTSASLQSILKDI 967
            + +++    T N  ++ R LE V  T A +P+    ++ + PVTG++ TS +L S+LKDI
Sbjct: 587  LPITSSNCATYNSDNDIRKLEQVTATIATIPSVIVNAAENFPVTGIS-TSTTLHSLLKDI 645

Query: 968  AVNPAPWMNLINMEQQKA 1021
            A+NP+ WMN+I  EQQK+
Sbjct: 646  AINPSIWMNIIKTEQQKS 663


>ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
            gi|223548611|gb|EEF50102.1| RNA polymerase II ctd
            phosphatase, putative [Ricinus communis]
          Length = 1195

 Score =  160 bits (405), Expect = 5e-37
 Identities = 121/333 (36%), Positives = 176/333 (52%), Gaps = 25/333 (7%)
 Frame = +2

Query: 95   PSPTRETTHPLPLGKALFVGDAEIRPEWPAPRGLLGTQNAVVHRYETDALKAVSTYQQKF 274
            PSPTRE+  PLP  + L             P+ +L T N+ +H YETDALKAVS+YQQKF
Sbjct: 328  PSPTRESALPLPAYRVL------------TPKMVLDTGNSRMHPYETDALKAVSSYQQKF 375

Query: 275  GRSSF-LSNDLPSPTPSEESGDAGGDCGGEVS---SFSTAQNTNSITEAISEQRDIFSIP 442
             +SSF L++ LPSPTPSEESG+  GD GGEVS   S S+ +  N +T   S      S+P
Sbjct: 376  SKSSFALTDRLPSPTPSEESGNGDGDTGGEVSSSLSVSSFRPANPLTSGQSNAS--ISLP 433

Query: 443  HVERPNVQLLANARSAAPVYSTSSSVIXXXXXXXXXXXXLANSES-SLDCNQGTLPLSSK 619
             ++  ++  + + +SA    S  S  +              NS+S +LD N   +P+ + 
Sbjct: 434  RMDGSSLPGVISIKSAVRASSAPSLTVKASAKSRDPRLRFVNSDSNALDQNHRAVPVVNT 493

Query: 620  QPAMETLDGLHGSRKQKTFDDPILVDGPAPKRLKNEFADSVNPRDIAAVSQTGGWSEDRV 799
               +E + G    ++QK  DDPI  DG + KR KN   +S   RD+  +  +GGW ED  
Sbjct: 494  L-KVEPIGGTMNKKRQKIVDDPI-PDGHSLKRQKNALENSGVVRDVKTMVGSGGWLEDTD 551

Query: 800  PVGMQVSNR---TGNVISEAR--DLENVVTTSALPNTSSV----HIPVTG---------- 922
             VG Q  N+     N  S+ R  D   V T+S+  ++ ++     IPVTG          
Sbjct: 552  MVGPQTMNKNQLVDNAESDPRRKDGGGVCTSSSCISSVNISGTEQIPVTGTSVPIGGELV 611

Query: 923  -VNPTSASLQSILKDIAVNPAPWMNLINMEQQK 1018
             V  ++A++  +LK+IAVNP   +N++ M QQ+
Sbjct: 612  PVKGSTAAIPDLLKNIAVNPTMLINILKMGQQQ 644


>ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
            phosphatase-like 3-like [Cucumis sativus]
          Length = 1249

 Score =  156 bits (394), Expect = 9e-36
 Identities = 121/320 (37%), Positives = 169/320 (52%), Gaps = 12/320 (3%)
 Frame = +2

Query: 95   PSPTRETTHPLPLGKALFVGDAEIRPEWPAPRGLLGTQNAVVHRYETDALKAVSTYQQKF 274
            PSPTRE      + K+   G+A  +  +P      G+++   H YETDALKAVSTYQQKF
Sbjct: 403  PSPTREAPTIFSVQKS---GNAPTKMAFPVD----GSRS---HPYETDALKAVSTYQQKF 452

Query: 275  GRSSF-LSNDLPSPTPSEESGDAGGDCGGEVSSFSTAQNTNSITEAISEQRDIFS----- 436
            GRSSF +++ LPSPTPSEE  D GGD GGEVSS S  ++  S   +   Q+   +     
Sbjct: 453  GRSSFSMADRLPSPTPSEEH-DGGGDIGGEVSSSSIIRSLKSSNVSKPGQKSNSASNVST 511

Query: 437  --IPHVERPNVQLLANARSAAPVYSTSSSVIXXXXXXXXXXXXLANSESS-LDCNQGTLP 607
               P+++  + ++L +  + AP  S S+  +            + NS++S +D N  T+ 
Sbjct: 512  GLFPNMDSSSTRVLISPLNVAPPSSVSNPTVKPLAKSRDPRLRIVNSDASGMDLNPRTMA 571

Query: 608  LSSKQPAMETLDGLHGSRKQKTFDDPILVDGPAPKRLKNEFAD-SVNPRDIAAVSQTGGW 784
                   +E+   LH  RKQK   +P   DGP  KRL+    + +V   D+ AVS +GGW
Sbjct: 572  SVQSSSILESAATLH-LRKQKMDGEP-NTDGPEVKRLRIGSQNLAVAASDVRAVSGSGGW 629

Query: 785  SEDRVPVGMQVSNRTGNVISEARDLE--NVVTTSALPNTSSVHIPVTGVNPTSASLQSIL 958
             ED +P G ++ NR    I+EA   E  NV   S   N  +     T  N   ASL S+L
Sbjct: 630  LEDTMPAGPRLFNRNQMEIAEANATEKSNVTNNSGSGNECT----PTVNNSNDASLPSLL 685

Query: 959  KDIAVNPAPWMNLINMEQQK 1018
            KDI VNP   +NL+ M QQ+
Sbjct: 686  KDIVVNPTMLLNLLKMSQQQ 705


Top