BLASTX nr result

ID: Atractylodes21_contig00026794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026794
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...    71   8e-11
emb|CBI19627.3| unnamed protein product [Vitis vinifera]               64   1e-08
ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    64   1e-08
emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera]    64   1e-08
ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08

>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/44 (77%), Positives = 39/44 (88%)
 Frame = -3

Query: 325 LANSPILERMTVNPASQDSGVELLKELLQFRRASTRAKIIYLDP 194
           L+NSP+LERMTV PAS D G EL+KELL+FRRAS RA+IIYLDP
Sbjct: 383 LSNSPVLERMTVKPASSDGGWELIKELLRFRRASARAEIIYLDP 426


>emb|CBI19627.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = -3

Query: 325 LANSPILERMTVNPASQDSGVELLKELLQFRRASTRAKIIYLDP 194
           LA SP+LE+MTV PAS D   EL+K+LL+FRRAS RA+IIYLDP
Sbjct: 303 LAYSPVLEKMTVKPASGDGAWELIKDLLRFRRASVRAEIIYLDP 346


>ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Vitis
           vinifera]
          Length = 416

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = -3

Query: 325 LANSPILERMTVNPASQDSGVELLKELLQFRRASTRAKIIYLDP 194
           LA SP+LE+MTV PAS D   EL+K+LL+FRRAS RA+IIYLDP
Sbjct: 373 LAYSPVLEKMTVKPASGDGAWELIKDLLRFRRASVRAEIIYLDP 416


>emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera]
          Length = 416

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = -3

Query: 325 LANSPILERMTVNPASQDSGVELLKELLQFRRASTRAKIIYLDP 194
           LA SP+LE+MTV PAS D   EL+K+LL+FRRAS RA+IIYLDP
Sbjct: 373 LAYSPVLEKMTVKPASGDGAWELIKDLLRFRRASVRAEIIYLDP 416


>ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|222835217|gb|EEE73652.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/44 (65%), Positives = 39/44 (88%)
 Frame = -3

Query: 325 LANSPILERMTVNPASQDSGVELLKELLQFRRASTRAKIIYLDP 194
           L+NSP+LE+MTV PAS + G EL+KELL+FRRAS +A++IYL+P
Sbjct: 373 LSNSPVLEQMTVKPASIEGGWELVKELLRFRRASIQAEVIYLEP 416


Top