BLASTX nr result

ID: Atractylodes21_contig00026752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026752
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531898.1| conserved hypothetical protein [Ricinus comm...    97   1e-18
ref|XP_002266906.1| PREDICTED: F-box/kelch-repeat protein SKIP25...    95   7e-18
ref|XP_002330862.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_002314220.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_003516495.1| PREDICTED: F-box/kelch-repeat protein SKIP25...    83   2e-14

>ref|XP_002531898.1| conserved hypothetical protein [Ricinus communis]
           gi|223528465|gb|EEF30497.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 399

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 51/111 (45%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
 Frame = -2

Query: 379 MLGGWRGPAAAMDEETIYTVDESKGVLRKYDELMQVWMDIV-EDDMLKGAEHXXXXXXXX 203
           ML GW+GP AAMDEE +Y VDE KG LRKYD    VW +I+ E +  KGA+         
Sbjct: 287 MLAGWKGPVAAMDEEVMYVVDEVKGALRKYDPSKDVWENIITESENFKGAQQIAAAGGRV 346

Query: 202 XXXXXXXXXXXXVDVVSSLPRLWELDTPAGDQVLALHILPRMCLPEFQSPM 50
                       VDVV++  RLW +DTP G + +A+HILPRM  PE   P+
Sbjct: 347 CVVCEGGNGIAVVDVVAAPVRLWTMDTPPGFEAVAVHILPRMSKPELGFPV 397


>ref|XP_002266906.1| PREDICTED: F-box/kelch-repeat protein SKIP25-like [Vitis vinifera]
          Length = 458

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 48/105 (45%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
 Frame = -2

Query: 379 MLGGWRGPAAAM----DEETIYTVDESKGVLRKYDELMQVWMDIVEDDMLKGAEHXXXXX 212
           MLGGWRGPAAAM      E +Y VDE KG+LRKYD     W ++VE ++L+GA+H     
Sbjct: 349 MLGGWRGPAAAMAMAGGAEEMYVVDEGKGILRKYDGERDAWEEVVEAEVLRGADHMAAGG 408

Query: 211 XXXXXXXXXXXXXXXVDVVSSLPRLWELDTPAGDQVLALHILPRM 77
                          VDVV+S PR+W +D P G   +A+H+LPRM
Sbjct: 409 GRVVVVSGGGGRVVVVDVVASTPRIWVVDPPEGLDAVAVHVLPRM 453


>ref|XP_002330862.1| predicted protein [Populus trichocarpa] gi|222872684|gb|EEF09815.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/106 (42%), Positives = 61/106 (57%)
 Frame = -2

Query: 379 MLGGWRGPAAAMDEETIYTVDESKGVLRKYDELMQVWMDIVEDDMLKGAEHXXXXXXXXX 200
           ML GWRGP A+MDEET++ VDE++GVLRKYD     W  ++E + L GA+          
Sbjct: 294 MLAGWRGPVASMDEETMFVVDEARGVLRKYDPEKDYWEHMMESERLVGAQKIAAGGGRVC 353

Query: 199 XXXXXXXXXXXVDVVSSLPRLWELDTPAGDQVLALHILPRMCLPEF 62
                      +DV +   +LW + TP G + LA+HILPRM  P+F
Sbjct: 354 VIRGCSTEIVVLDVAALPVKLWVVKTPPGFEALAIHILPRMSRPDF 399


>ref|XP_002314220.1| predicted protein [Populus trichocarpa] gi|222850628|gb|EEE88175.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 45/105 (42%), Positives = 59/105 (56%)
 Frame = -2

Query: 379 MLGGWRGPAAAMDEETIYTVDESKGVLRKYDELMQVWMDIVEDDMLKGAEHXXXXXXXXX 200
           M+ GWRGP AAMDEE +Y VDE+KGVLRKYD     W  I+E + L GA+          
Sbjct: 292 MVAGWRGPVAAMDEEVMYVVDEAKGVLRKYDPERDCWERIMESERLIGAQQIAAGGGRVC 351

Query: 199 XXXXXXXXXXXVDVVSSLPRLWELDTPAGDQVLALHILPRMCLPE 65
                      +DVV+   RLW ++TP G +   +HILPR+  P+
Sbjct: 352 VICGGSTELVVLDVVALPVRLWVVETPPGFEAFRIHILPRISRPD 396


>ref|XP_003516495.1| PREDICTED: F-box/kelch-repeat protein SKIP25-like [Glycine max]
          Length = 375

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 44/101 (43%), Positives = 59/101 (58%)
 Frame = -2

Query: 379 MLGGWRGPAAAMDEETIYTVDESKGVLRKYDELMQVWMDIVEDDMLKGAEHXXXXXXXXX 200
           ML GWRGP AAM+EE +Y VDE+KGVLR+Y E    W +I+E++ LKGAE          
Sbjct: 272 MLHGWRGPVAAMEEEVMYVVDEAKGVLRRYVEEEDSWEEILENERLKGAE-KIVAWRGKL 330

Query: 199 XXXXXXXXXXXVDVVSSLPRLWELDTPAGDQVLALHILPRM 77
                      VDV +  PR+W +  P G + + +HILPR+
Sbjct: 331 CVVSASSGISVVDVAAPSPRIWSVRLPEGFEPVTVHILPRI 371


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