BLASTX nr result

ID: Atractylodes21_contig00026696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026696
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136154.1| PREDICTED: DNA mismatch repair protein MSH6-...   142   4e-32
ref|XP_002320307.1| predicted protein [Populus trichocarpa] gi|2...   138   4e-31
ref|XP_002333974.1| predicted protein [Populus trichocarpa] gi|2...   138   4e-31
ref|XP_002311781.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-30
gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida]        136   2e-30

>ref|XP_004136154.1| PREDICTED: DNA mismatch repair protein MSH6-like [Cucumis sativus]
          Length = 1307

 Score =  142 bits (357), Expect = 4e-32
 Identities = 68/88 (77%), Positives = 78/88 (88%)
 Frame = +1

Query: 22  DRIYGGCVVDVATSKIIIGQFGDDSECSVLTCLLSQLRPVEIIKPIKSLSPETERVLLRQ 201
           +RI G CVVDVATS++I+GQFGDDSECS L CLLS+LRPVEIIKP K LSPETERVLL  
Sbjct: 487 ERILGVCVVDVATSRVILGQFGDDSECSALCCLLSELRPVEIIKPAKLLSPETERVLLTH 546

Query: 202 TRSPVVNELVPLEEFWDAEKTIREVKEI 285
           TR+P+VNELVPL EFWDAEKT++EVK +
Sbjct: 547 TRNPLVNELVPLLEFWDAEKTVQEVKRL 574


>ref|XP_002320307.1| predicted protein [Populus trichocarpa] gi|222861080|gb|EEE98622.1|
           predicted protein [Populus trichocarpa]
          Length = 1288

 Score =  138 bits (348), Expect = 4e-31
 Identities = 65/92 (70%), Positives = 79/92 (85%)
 Frame = +1

Query: 10  NQHGDRIYGGCVVDVATSKIIIGQFGDDSECSVLTCLLSQLRPVEIIKPIKSLSPETERV 189
           NQ  +RI+G CVVDV TS+II+GQFGDD+ECS L CLLS+LRPVEI+KP K LS ETERV
Sbjct: 452 NQGLERIFGVCVVDVTTSRIILGQFGDDAECSSLCCLLSELRPVEIVKPAKMLSSETERV 511

Query: 190 LLRQTRSPVVNELVPLEEFWDAEKTIREVKEI 285
           ++R TR+P+VNEL PL EFWDAE+T++EVK I
Sbjct: 512 MVRHTRNPLVNELAPLSEFWDAERTVQEVKTI 543


>ref|XP_002333974.1| predicted protein [Populus trichocarpa] gi|222839403|gb|EEE77740.1|
           predicted protein [Populus trichocarpa]
          Length = 805

 Score =  138 bits (348), Expect = 4e-31
 Identities = 65/92 (70%), Positives = 79/92 (85%)
 Frame = +1

Query: 10  NQHGDRIYGGCVVDVATSKIIIGQFGDDSECSVLTCLLSQLRPVEIIKPIKSLSPETERV 189
           NQ  +RI+G CVVDV TS+II+GQFGDD+ECS L CLLS+LRPVEI+KP K LS ETERV
Sbjct: 503 NQGLERIFGVCVVDVTTSRIILGQFGDDAECSSLCCLLSELRPVEIVKPAKMLSSETERV 562

Query: 190 LLRQTRSPVVNELVPLEEFWDAEKTIREVKEI 285
           ++R TR+P+VNEL PL EFWDAE+T++EVK I
Sbjct: 563 MVRHTRNPLVNELAPLSEFWDAERTVQEVKTI 594


>ref|XP_002311781.1| predicted protein [Populus trichocarpa] gi|222851601|gb|EEE89148.1|
           predicted protein [Populus trichocarpa]
          Length = 931

 Score =  137 bits (344), Expect = 1e-30
 Identities = 64/92 (69%), Positives = 78/92 (84%)
 Frame = +1

Query: 10  NQHGDRIYGGCVVDVATSKIIIGQFGDDSECSVLTCLLSQLRPVEIIKPIKSLSPETERV 189
           NQ  +RI+G C VDV TS+II+GQFGDD+ECS L CLLS+LRPVEI+KP K LS ETERV
Sbjct: 269 NQGLERIFGVCAVDVTTSRIILGQFGDDAECSSLCCLLSELRPVEIVKPAKMLSSETERV 328

Query: 190 LLRQTRSPVVNELVPLEEFWDAEKTIREVKEI 285
           ++R TR+P+VNEL PL EFWDA+KT++EVK I
Sbjct: 329 MVRHTRNPLVNELAPLSEFWDADKTVQEVKTI 360


>gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida]
          Length = 1303

 Score =  136 bits (342), Expect = 2e-30
 Identities = 65/91 (71%), Positives = 75/91 (82%)
 Frame = +1

Query: 13  QHGDRIYGGCVVDVATSKIIIGQFGDDSECSVLTCLLSQLRPVEIIKPIKSLSPETERVL 192
           Q G   YG C+VD+ TSKII+GQF DDS+CS L CLLS+LRPVE+IKP K LS ETERV+
Sbjct: 483 QQGKHTYGVCMVDITTSKIILGQFEDDSDCSALCCLLSELRPVEVIKPAKLLSLETERVM 542

Query: 193 LRQTRSPVVNELVPLEEFWDAEKTIREVKEI 285
           LR TR+P+VNELVPL EFWDAE+TI EVK I
Sbjct: 543 LRHTRNPLVNELVPLSEFWDAERTISEVKRI 573


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