BLASTX nr result

ID: Atractylodes21_contig00026587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026587
         (866 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_064064.2| nad2 gene product (mitochondrion) [Beta vulgari...   323   4e-86
sp|O05000.2|NU2M_ARATH RecName: Full=NADH-ubiquinone oxidoreduct...   318   9e-86
ref|YP_003875489.1| NADH dehydrogenase subunit 2 [Silene latifol...   321   2e-85
gb|ADG85358.1| NADH dehydrogenase subunit 2 [Silene latifolia]        321   2e-85
sp|P93401.2|NU2M_OENBE RecName: Full=NADH-ubiquinone oxidoreduct...   320   2e-85

>ref|NP_064064.2| nad2 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435024|ref|YP_004222260.1| NADH dehydrogenase
           subunit 2 [Beta vulgaris subsp. maritima]
           gi|346683118|ref|YP_004842067.1| NADH dehydrogenase
           subunit 2 [Beta macrocarpa] gi|87248033|gb|ABD36071.1|
           NADH dehydrogenase subunit 2 [Beta vulgaris subsp.
           vulgaris] gi|157153896|dbj|BAA99456.2| NADH
           dehydrogenase subunit 2 [Beta vulgaris subsp. vulgaris]
           gi|317905581|emb|CBJ13993.1| NADH dehydrogenase subunit
           2 [Beta vulgaris subsp. maritima]
           gi|319439757|emb|CBJ17481.1| NADH dehydrogenase subunit
           2 [Beta vulgaris subsp. maritima]
           gi|320147994|emb|CBJ20660.1| NADH dehydrogenase subunit
           2 [Beta vulgaris subsp. maritima]
           gi|345500036|emb|CBX24852.1| NADH dehydrogenase subunit
           2 [Beta macrocarpa]
          Length = 488

 Score =  323 bits (827), Expect = 4e-86
 Identities = 163/189 (86%), Positives = 166/189 (87%)
 Frame = +3

Query: 300 MFNLFLAVFPEIFLINATFILLIHGVVFSTSKKFDYPPLVSNVGWXXXXXXXXXXXXXXX 479
           MFNLFLAVFPEIFLINATFILLIHGV+FSTSKK+DYPPLVSNVGW               
Sbjct: 1   MFNLFLAVFPEIFLINATFILLIHGVIFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAA 60

Query: 480 XXXXXXXXHLFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILL 659
                   HLFWNNFF+RDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILL
Sbjct: 61  GAPLLTIAHLFWNNFFKRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILL 120

Query: 660 STCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 839
           STCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL
Sbjct: 121 STCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 180

Query: 840 FGCSMIYGS 866
           FGCSMIYGS
Sbjct: 181 FGCSMIYGS 189


>sp|O05000.2|NU2M_ARATH RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName:
           Full=NADH dehydrogenase subunit 2
          Length = 499

 Score =  318 bits (816), Expect(2) = 9e-86
 Identities = 160/190 (84%), Positives = 163/190 (85%)
 Frame = +3

Query: 297 HMFNLFLAVFPEIFLINATFILLIHGVVFSTSKKFDYPPLVSNVGWXXXXXXXXXXXXXX 476
           HMFNLFLAVFPEIF+INATFILLIHGVVFSTSKK+DYPPL SNVGW              
Sbjct: 11  HMFNLFLAVFPEIFIINATFILLIHGVVFSTSKKYDYPPLASNVGWLGLLSVLITLLLLA 70

Query: 477 XXXXXXXXXHLFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLIL 656
                    HLFWNN FRRDNFTYFCQI LLLSTAGTISMCFDFF+QERFDAFEFIVLIL
Sbjct: 71  AGAPLLTIAHLFWNNLFRRDNFTYFCQIFLLLSTAGTISMCFDFFDQERFDAFEFIVLIL 130

Query: 657 LSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGIL 836
           LSTC MLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGIL
Sbjct: 131 LSTCGMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGIL 190

Query: 837 LFGCSMIYGS 866
           LFGCSMIYGS
Sbjct: 191 LFGCSMIYGS 200



 Score = 25.4 bits (54), Expect(2) = 9e-86
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +2

Query: 269 MKAEFVRILSHVQSFF 316
           MKAEFVRIL H+ + F
Sbjct: 1   MKAEFVRILPHMFNLF 16


>ref|YP_003875489.1| NADH dehydrogenase subunit 2 [Silene latifolia]
           gi|301338040|gb|ADK73332.1| NADH dehydrogenase subunit 2
           [Silene latifolia]
          Length = 488

 Score =  321 bits (822), Expect = 2e-85
 Identities = 162/189 (85%), Positives = 165/189 (87%)
 Frame = +3

Query: 300 MFNLFLAVFPEIFLINATFILLIHGVVFSTSKKFDYPPLVSNVGWXXXXXXXXXXXXXXX 479
           MFNLFLAVFPEIF+INATFILLIHGVVFSTSKK+DYPPLVSNVGW               
Sbjct: 1   MFNLFLAVFPEIFIINATFILLIHGVVFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAA 60

Query: 480 XXXXXXXXHLFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILL 659
                   HLFWNNFF+RDNFTYFCQI LLLSTAGTISMCFDFFEQERFDAFEFIVLILL
Sbjct: 61  GAPLLTIAHLFWNNFFKRDNFTYFCQIFLLLSTAGTISMCFDFFEQERFDAFEFIVLILL 120

Query: 660 STCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 839
           STCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL
Sbjct: 121 STCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 180

Query: 840 FGCSMIYGS 866
           FGCSMIYGS
Sbjct: 181 FGCSMIYGS 189


>gb|ADG85358.1| NADH dehydrogenase subunit 2 [Silene latifolia]
          Length = 488

 Score =  321 bits (822), Expect = 2e-85
 Identities = 162/189 (85%), Positives = 165/189 (87%)
 Frame = +3

Query: 300 MFNLFLAVFPEIFLINATFILLIHGVVFSTSKKFDYPPLVSNVGWXXXXXXXXXXXXXXX 479
           MFNLFLAVFPEIF+INATFILLIHGVVFSTSKK+DYPPLVSNVGW               
Sbjct: 1   MFNLFLAVFPEIFIINATFILLIHGVVFSTSKKYDYPPLVSNVGWLGLLSVLITLLLLAA 60

Query: 480 XXXXXXXXHLFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILL 659
                   HLFWNNFF+RDNFTYFCQI LLLSTAGTISMCFDFFEQERFDAFEFIVLILL
Sbjct: 61  GAPLLTIAHLFWNNFFKRDNFTYFCQIFLLLSTAGTISMCFDFFEQERFDAFEFIVLILL 120

Query: 660 STCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 839
           STCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL
Sbjct: 121 STCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 180

Query: 840 FGCSMIYGS 866
           FGCSMIYGS
Sbjct: 181 FGCSMIYGS 189


>sp|P93401.2|NU2M_OENBE RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName:
           Full=NADH dehydrogenase subunit 2
          Length = 488

 Score =  320 bits (821), Expect = 2e-85
 Identities = 163/189 (86%), Positives = 165/189 (87%)
 Frame = +3

Query: 300 MFNLFLAVFPEIFLINATFILLIHGVVFSTSKKFDYPPLVSNVGWXXXXXXXXXXXXXXX 479
           MFNLFLAVFPEIF+INATFILLIHGVVFSTSKK DYPPLVSNVGW               
Sbjct: 1   MFNLFLAVFPEIFIINATFILLIHGVVFSTSKKDDYPPLVSNVGWLGLLSVLITLLLLAA 60

Query: 480 XXXXXXXXHLFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILL 659
                   HLFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILL
Sbjct: 61  GAPLLTIAHLFWNNFFRRDNFTYFCQILLLLSTAGTISMCFDFFEQERFDAFEFIVLILL 120

Query: 660 STCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKSEFSTEAGLKYLILGAFSSGILL 839
           STCSMLFMISAYDLIAMYLAIELQSLCFYV+AASKRKSEFSTEAGLKYLILGAFSSGILL
Sbjct: 121 STCSMLFMISAYDLIAMYLAIELQSLCFYVLAASKRKSEFSTEAGLKYLILGAFSSGILL 180

Query: 840 FGCSMIYGS 866
           FGCSMIYGS
Sbjct: 181 FGCSMIYGS 189


Top