BLASTX nr result

ID: Atractylodes21_contig00026553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026553
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair p...    79   4e-13
emb|CAN60638.1| hypothetical protein VITISV_022224 [Vitis vinifera]    79   4e-13
ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, pa...    75   4e-12
ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cu...    75   4e-12
ref|XP_002300148.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10

>ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like
           [Vitis vinifera]
          Length = 1316

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 40/66 (60%), Positives = 50/66 (75%)
 Frame = -2

Query: 251 LAQISSDKEFVESLVQPVERCVKLLGETQKL*QVIDDLEYKLDFRGVDVKSMEEIQCELH 72
           LAQ+ +DK+ VE+L+QPVE   +L  E Q   + +DDLEYKLDFRG  V+SMEEIQ EL+
Sbjct: 788 LAQVKTDKDSVEALMQPVETADRLFQEIQTWQKQVDDLEYKLDFRGQGVRSMEEIQLELN 847

Query: 71  TAQNTK 54
           T QNTK
Sbjct: 848 TLQNTK 853


>emb|CAN60638.1| hypothetical protein VITISV_022224 [Vitis vinifera]
          Length = 527

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 40/66 (60%), Positives = 50/66 (75%)
 Frame = -2

Query: 251 LAQISSDKEFVESLVQPVERCVKLLGETQKL*QVIDDLEYKLDFRGVDVKSMEEIQCELH 72
           LAQ+ +DK+ VE+L+QPVE   +L  E Q   + +DDLEYKLDFRG  V+SMEEIQ EL+
Sbjct: 199 LAQVKTDKDSVEALMQPVETADRLFQEIQTWQKQVDDLEYKLDFRGQGVRSMEEIQLELN 258

Query: 71  TAQNTK 54
           T QNTK
Sbjct: 259 TLQNTK 264


>ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, partial [Cucumis sativus]
          Length = 1088

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/66 (56%), Positives = 50/66 (75%)
 Frame = -2

Query: 251 LAQISSDKEFVESLVQPVERCVKLLGETQKL*QVIDDLEYKLDFRGVDVKSMEEIQCELH 72
           LAQ+ +D++ VE+LVQP++   +L  E Q L + +DDL YKLDFRG  VK++EEIQ EL+
Sbjct: 560 LAQVKADRDSVENLVQPIDTADRLYQEIQTLQKQVDDLVYKLDFRGKGVKTLEEIQSELN 619

Query: 71  TAQNTK 54
           T QNTK
Sbjct: 620 TLQNTK 625


>ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cucumis sativus]
          Length = 1316

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/66 (56%), Positives = 50/66 (75%)
 Frame = -2

Query: 251 LAQISSDKEFVESLVQPVERCVKLLGETQKL*QVIDDLEYKLDFRGVDVKSMEEIQCELH 72
           LAQ+ +D++ VE+LVQP++   +L  E Q L + +DDL YKLDFRG  VK++EEIQ EL+
Sbjct: 788 LAQVKADRDSVENLVQPIDTADRLYQEIQTLQKQVDDLVYKLDFRGKGVKTLEEIQSELN 847

Query: 71  TAQNTK 54
           T QNTK
Sbjct: 848 TLQNTK 853


>ref|XP_002300148.1| predicted protein [Populus trichocarpa] gi|222847406|gb|EEE84953.1|
           predicted protein [Populus trichocarpa]
          Length = 1316

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/66 (54%), Positives = 47/66 (71%)
 Frame = -2

Query: 251 LAQISSDKEFVESLVQPVERCVKLLGETQKL*QVIDDLEYKLDFRGVDVKSMEEIQCELH 72
           LAQ  ++K+ VE+LVQPVE   +L  E Q   + +DDLEYKLDFRG  V++MEE+Q EL 
Sbjct: 788 LAQTKAEKDSVEALVQPVETADRLFQEIQTWQKQVDDLEYKLDFRGQGVRTMEEVQSELS 847

Query: 71  TAQNTK 54
           + Q TK
Sbjct: 848 SLQGTK 853


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