BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026406
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicoti...   135   3e-30
gb|EAY90802.1| hypothetical protein OsI_12404 [Oryza sativa Indi...   120   1e-25
ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases I, I...   118   4e-25
ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, I...   118   6e-25
ref|NP_001236044.1| uncharacterized protein LOC100305739 [Glycin...   117   7e-25

>gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicotiana tabacum]
           gi|4960152|gb|AAD34614.1|AF153278_1 DNA-directed RNA
           polymerase IIb [Nicotiana tabacum]
          Length = 143

 Score =  135 bits (341), Expect = 3e-30
 Identities = 72/113 (63%), Positives = 80/113 (70%)
 Frame = -1

Query: 339 DEDFEMDGAYXXXXXXXXXXXXXXXXXXXENKDDELPDPLLGDNXXXXXXXXXERPRKTS 160
           D+D++MDG Y                    N +D +PDPLLG+          ERPRKTS
Sbjct: 3   DDDYDMDGGYVDEPIEPEPDEGAEIEEDNGNNED-IPDPLLGEGEEKTEQEPVERPRKTS 61

Query: 159 KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQKKIPFTIR 1
           KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR++KIPFTIR
Sbjct: 62  KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR 114


>gb|EAY90802.1| hypothetical protein OsI_12404 [Oryza sativa Indica Group]
          Length = 143

 Score =  120 bits (300), Expect = 1e-25
 Identities = 61/83 (73%), Positives = 68/83 (81%)
 Frame = -1

Query: 249 NKDDELPDPLLGDNXXXXXXXXXERPRKTSKYMTKYERARILGTRALQISMNAPVMVELE 70
           N +++ PD ++G           +RPRKTSKYMTKYERARILGTRALQISMNAPVMVELE
Sbjct: 32  NNNEDGPDEVVGAEAEDKEQEKTQRPRKTSKYMTKYERARILGTRALQISMNAPVMVELE 91

Query: 69  GETDPLEIAMKELRQKKIPFTIR 1
           GETDPLEIAMKELR +KIPFTIR
Sbjct: 92  GETDPLEIAMKELRARKIPFTIR 114


>ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2-like [Glycine max]
          Length = 142

 Score =  118 bits (296), Expect = 4e-25
 Identities = 65/84 (77%), Positives = 70/84 (83%), Gaps = 1/84 (1%)
 Frame = -1

Query: 249 NKDDELP-DPLLGDNXXXXXXXXXERPRKTSKYMTKYERARILGTRALQISMNAPVMVEL 73
           NK+DEL  +P+  D          ERPRKTSKYMTKYERARILGTRALQISMNAPVMVEL
Sbjct: 32  NKNDELTGEPI--DTEDKEEEQPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVEL 89

Query: 72  EGETDPLEIAMKELRQKKIPFTIR 1
           EGETDPLEIAMKELR++KIPFTIR
Sbjct: 90  EGETDPLEIAMKELRERKIPFTIR 113


>ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2 isoform 1 [Vitis vinifera]
           gi|297741100|emb|CBI31831.3| unnamed protein product
           [Vitis vinifera]
          Length = 142

 Score =  118 bits (295), Expect = 6e-25
 Identities = 62/83 (74%), Positives = 69/83 (83%)
 Frame = -1

Query: 249 NKDDELPDPLLGDNXXXXXXXXXERPRKTSKYMTKYERARILGTRALQISMNAPVMVELE 70
           N ++++PD L  +          ERPRKTSKYMTKYERARILGTRALQISMNAPVMVELE
Sbjct: 33  NNNEDVPDAL--EEQEKEVHETVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELE 90

Query: 69  GETDPLEIAMKELRQKKIPFTIR 1
           GETDPLEIAMKELR++KIPFTIR
Sbjct: 91  GETDPLEIAMKELRERKIPFTIR 113


>ref|NP_001236044.1| uncharacterized protein LOC100305739 [Glycine max]
           gi|255626491|gb|ACU13590.1| unknown [Glycine max]
          Length = 142

 Score =  117 bits (294), Expect = 7e-25
 Identities = 62/83 (74%), Positives = 68/83 (81%)
 Frame = -1

Query: 249 NKDDELPDPLLGDNXXXXXXXXXERPRKTSKYMTKYERARILGTRALQISMNAPVMVELE 70
           NK+DE+    + D          +RPRKTSKYMTKYERARILGTRALQISMNAPVMVELE
Sbjct: 32  NKNDEITGESI-DTEDKEEEQPVKRPRKTSKYMTKYERARILGTRALQISMNAPVMVELE 90

Query: 69  GETDPLEIAMKELRQKKIPFTIR 1
           GETDPLEIAMKELR++KIPFTIR
Sbjct: 91  GETDPLEIAMKELRERKIPFTIR 113