BLASTX nr result

ID: Atractylodes21_contig00026345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026345
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38763.1| unknown [Medicago truncatula]                           62   6e-08
ref|XP_003588776.1| U11/U12 small nuclear ribonucleoprotein 25 k...    62   6e-08
gb|AFK48583.1| unknown [Lotus japonicus]                               60   1e-07
gb|AFK47791.1| unknown [Lotus japonicus]                               60   1e-07
emb|CBI21054.3| unnamed protein product [Vitis vinifera]               59   3e-07

>gb|AFK38763.1| unknown [Medicago truncatula]
          Length = 226

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/44 (65%), Positives = 36/44 (81%)
 Frame = -2

Query: 134 SRKSFSYGKLPLEPIKLTVLKLDGTSFDITVAKNPTVAQLKQAV 3
           S KS  Y KLP EP++L+VLKLDGTSFD+ V+KN T+A+LK AV
Sbjct: 34  STKSLLYDKLPSEPLRLSVLKLDGTSFDVHVSKNATIAELKDAV 77


>ref|XP_003588776.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Medicago
           truncatula] gi|355477824|gb|AES59027.1| U11/U12 small
           nuclear ribonucleoprotein 25 kDa protein [Medicago
           truncatula]
          Length = 266

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/44 (65%), Positives = 36/44 (81%)
 Frame = -2

Query: 134 SRKSFSYGKLPLEPIKLTVLKLDGTSFDITVAKNPTVAQLKQAV 3
           S KS  Y KLP EP++L+VLKLDGTSFD+ V+KN T+A+LK AV
Sbjct: 34  STKSLLYDKLPSEPLRLSVLKLDGTSFDVHVSKNATIAELKDAV 77


>gb|AFK48583.1| unknown [Lotus japonicus]
          Length = 220

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/49 (59%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
 Frame = -2

Query: 146 IETL-SRKSFSYGKLPLEPIKLTVLKLDGTSFDITVAKNPTVAQLKQAV 3
           I+T+ ++KSF YGKLP +P +L+VLKLDG+SFDI V+K  ++A+LK AV
Sbjct: 29  IDTIFAKKSFLYGKLPSQPFRLSVLKLDGSSFDIQVSKTASIAELKDAV 77


>gb|AFK47791.1| unknown [Lotus japonicus]
          Length = 269

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/49 (59%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
 Frame = -2

Query: 146 IETL-SRKSFSYGKLPLEPIKLTVLKLDGTSFDITVAKNPTVAQLKQAV 3
           I+T+ ++KSF YGKLP +P +L+VLKLDG+SFDI V+K  ++A+LK AV
Sbjct: 29  IDTIFAKKSFLYGKLPSQPFRLSVLKLDGSSFDIQVSKTASIAELKDAV 77


>emb|CBI21054.3| unnamed protein product [Vitis vinifera]
          Length = 251

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/48 (64%), Positives = 36/48 (75%)
 Frame = -2

Query: 146 IETLSRKSFSYGKLPLEPIKLTVLKLDGTSFDITVAKNPTVAQLKQAV 3
           I  LSRK+  Y KLP +PIKL+VLKLDG+ F I V K  TVA+LKQAV
Sbjct: 27  INGLSRKASFYWKLPQQPIKLSVLKLDGSCFQIEVTKTSTVAELKQAV 74


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