BLASTX nr result

ID: Atractylodes21_contig00026332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026332
         (1380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31214.3| unnamed protein product [Vitis vinifera]              228   4e-57
ref|XP_002269372.2| PREDICTED: transcription factor IIIB 90 kDa ...   197   4e-48
ref|XP_003578728.1| PREDICTED: transcription factor IIIB 60 kDa ...   189   1e-45
ref|XP_003561419.1| PREDICTED: uncharacterized protein LOC100840...   189   2e-45
gb|EEC78942.1| hypothetical protein OsI_19387 [Oryza sativa Indi...   187   6e-45

>emb|CBI31214.3| unnamed protein product [Vitis vinifera]
          Length = 622

 Score =  228 bits (580), Expect = 4e-57
 Identities = 149/368 (40%), Positives = 194/368 (52%), Gaps = 12/368 (3%)
 Frame = +3

Query: 3    GRKPSGICAAAIYVSSVLHGYNFSRADVVKAVHICEATLTKRLIEFENTKAGSLTIEEFT 182
            GRKPSG+C AA+Y+S++ +G   S+ D+VK VHICEATLTKRLIEFENT++GSLTIEEF 
Sbjct: 213  GRKPSGLCGAALYISALSYGLKCSKTDIVKIVHICEATLTKRLIEFENTESGSLTIEEFN 272

Query: 183  EHAMAFEKEMQSCKQSVKDPKMPGLTEVVCQHK-SNAVQSGFGLCKNCYLEF---CGGLE 350
              A   EKE  S KQS     +PG  E++C+HK S       GLC+ CY EF    GGLE
Sbjct: 273  MKAEELEKEYSSTKQSNIGSTVPGKGELLCEHKGSGKPPFAHGLCEICYGEFIKLSGGLE 332

Query: 351  -GSEPPAFQRAEMERVAMEPVEMSTESASCKEPPRKTNENDNGTQHNSEPNANLKETGKG 527
             GSEPPAFQRAE +R+A    E + +S           + D G   +S P+    E+ K 
Sbjct: 333  GGSEPPAFQRAERDRMAKAAAEENADSNQI--------QLDKG---SSSPDVCGNESSKL 381

Query: 528  SLTEVQCTSPTPGKFDEIGDTVDTSERSKDVPDTVDETDTLSDIDDCEVNCYLNNAEESR 707
            +  +    S      DE G   D      +  +  DE+++LSDIDD EV+ YL+N +E +
Sbjct: 382  AEPKSIGASDKQASIDE-GAPSDLHGADDENANAGDESESLSDIDDVEVDGYLHNEKEKQ 440

Query: 708  YKKIIWEQMNKEYMXXXXXXXXXXXXXRKLYTGT----SXXXXXXXXXXXXXXXXXXXXX 875
            +KKIIWE MNKEY+             ++ Y  +                          
Sbjct: 441  FKKIIWEAMNKEYLEEQAAKEAAAAAAKEAYEASFKDNPEGLKAAQELAAATAAAVAKSR 500

Query: 876  XXXXXXXXXXXXXXXPAQTAAEAAGQLFTKKKLSSKINYDVLNTLFDD---EPSPKKNHV 1046
                           PAQTAAEA  Q+ TKK+LSSKINYDVL  LFDD     +PKK   
Sbjct: 501  KERQQKRAAEAKNTVPAQTAAEATRQMLTKKRLSSKINYDVLEKLFDDSVPSENPKKIRT 560

Query: 1047 DGDAKGKE 1070
            +   +  +
Sbjct: 561  ESQTENND 568


>ref|XP_002269372.2| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Vitis
           vinifera]
          Length = 529

 Score =  197 bits (502), Expect = 4e-48
 Identities = 119/254 (46%), Positives = 155/254 (61%), Gaps = 5/254 (1%)
 Frame = +3

Query: 3   GRKPSGICAAAIYVSSVLHGYNFSRADVVKAVHICEATLTKRLIEFENTKAGSLTIEEFT 182
           GRKPSG+C AA+Y+S++ +G   S+ D+VK VHICEATLTKRLIEFENT++GSLTIEEF 
Sbjct: 213 GRKPSGLCGAALYISALSYGLKCSKTDIVKIVHICEATLTKRLIEFENTESGSLTIEEFN 272

Query: 183 EHAMAFEKEMQSCKQSVKDPKMPGLTEVVCQHK-SNAVQSGFGLCKNCYLEF---CGGLE 350
             A   EKE  S KQS     +PG  E++C+HK S       GLC+ CY EF    GGLE
Sbjct: 273 MKAEELEKEYSSTKQSNIGSTVPGKGELLCEHKGSGKPPFAHGLCEICYGEFIKLSGGLE 332

Query: 351 -GSEPPAFQRAEMERVAMEPVEMSTESASCKEPPRKTNENDNGTQHNSEPNANLKETGKG 527
            GSEPPAFQRAE +R+A    E + +S           + D G   +S P+    E+ K 
Sbjct: 333 GGSEPPAFQRAERDRMAKAAAEENADSNQI--------QLDKG---SSSPDVCGNESSKL 381

Query: 528 SLTEVQCTSPTPGKFDEIGDTVDTSERSKDVPDTVDETDTLSDIDDCEVNCYLNNAEESR 707
           +  +    S      DE G   D      +  +  DE+++LSDIDD EV+ YL+N +E +
Sbjct: 382 AEPKSIGASDKQASIDE-GAPSDLHGADDENANAGDESESLSDIDDVEVDGYLHNEKEKQ 440

Query: 708 YKKIIWEQMNKEYM 749
           +KKIIWE MNKEY+
Sbjct: 441 FKKIIWEAMNKEYL 454


>ref|XP_003578728.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like
            [Brachypodium distachyon]
          Length = 580

 Score =  189 bits (481), Expect = 1e-45
 Identities = 133/364 (36%), Positives = 184/364 (50%), Gaps = 13/364 (3%)
 Frame = +3

Query: 3    GRKPSGICAAAIYVSSVLHGYNFSRADVVKAVHICEATLTKRLIEFENTKAGSLTIEEFT 182
            GRKPSG+C AA+Y++++ HGYN++++D+V  VHICEATLTKRLIEFENT +GSLTIE+F 
Sbjct: 214  GRKPSGLCGAALYIAALSHGYNYTKSDIVGVVHICEATLTKRLIEFENTDSGSLTIEDFL 273

Query: 183  EHAMAFEKEMQSCKQSVKDPKMPGLTEVVCQHKSNAVQS-GFGLCKNCYLEF---CGGLE 350
              A   ++E    K S K        EV+C+HK    +    GLC+ CY +F    GGLE
Sbjct: 274  AKA---DEEQPVSKPSRKS------GEVLCKHKDKDTEHFAHGLCEKCYNKFIKMSGGLE 324

Query: 351  -GSEPPAFQRAEMERVAMEPVEMSTESASCKEPPRKTNENDNGTQHNSEPNANLKETGKG 527
             G++PPAFQRAE +R  +E  + S E+A+ KE         N    NS+   N+    KG
Sbjct: 325  GGADPPAFQRAERQR--LEAAKKSEEAAALKE---AALGESNCEIQNSDVEDNIISLKKG 379

Query: 528  SLTEVQCTSPT--------PGKFDEIGDTVDTSERSKDVPDTVDETDTLSDIDDCEVNCY 683
             + +   T P+          K  E+G      E SK  PD   + ++ SDIDD EV+ Y
Sbjct: 380  PIGDKSSTIPSEQNANDNIASKDPEVG-----GENSK--PDA--DPESFSDIDDVEVDGY 430

Query: 684  LNNAEESRYKKIIWEQMNKEYMXXXXXXXXXXXXXRKLYTGTSXXXXXXXXXXXXXXXXX 863
            L+N EE+ YKKIIWE+MNKEY+                  G                   
Sbjct: 431  LHNEEETHYKKIIWEEMNKEYIEEQAAKEALAAELAARGVGVG----------------- 473

Query: 864  XXXXXXXXXXXXXXXXXXXPAQTAAEAAGQLFTKKKLSSKINYDVLNTLFDDEPSPKKNH 1043
                               PA+T AEA   +  +K L SKIN + +  L++ +    + +
Sbjct: 474  --GGQQKKRRRNEDTKNLSPAETPAEATYNMLKRKGLGSKINVEAVGGLYNTKDEEGEAN 531

Query: 1044 VDGD 1055
              GD
Sbjct: 532  EKGD 535


>ref|XP_003561419.1| PREDICTED: uncharacterized protein LOC100840180 [Brachypodium
            distachyon]
          Length = 721

 Score =  189 bits (479), Expect = 2e-45
 Identities = 132/364 (36%), Positives = 185/364 (50%), Gaps = 13/364 (3%)
 Frame = +3

Query: 3    GRKPSGICAAAIYVSSVLHGYNFSRADVVKAVHICEATLTKRLIEFENTKAGSLTIEEFT 182
            GRKPSG+C AA+Y++++ HGYN++++D+V  VHICEATLTKRLIEFENT +GSLTIE+  
Sbjct: 355  GRKPSGLCGAALYIAALSHGYNYTKSDIVAVVHICEATLTKRLIEFENTDSGSLTIEDVL 414

Query: 183  EHAMAFEKEMQSCKQSVKDPKMPGLTEVVCQHKSNAVQS-GFGLCKNCYLEF---CGGLE 350
              A   ++E    K S K        EV+C+HK   ++    GLC+ CY +F    GGLE
Sbjct: 415  AKA---DEEQPVSKPSRKS------GEVLCKHKDKDIEHFAHGLCEKCYNKFIKMSGGLE 465

Query: 351  -GSEPPAFQRAEMERVAMEPVEMSTESASCKEPPRKTNENDNGTQHNSEPNANLKETGKG 527
             G++PPAFQRAE +R  +E  + S E+A+ KE         N    NS+   N+    KG
Sbjct: 466  GGADPPAFQRAERQR--LEAAKKSEEAAALKE---AALGESNCEIQNSDVEDNIISPKKG 520

Query: 528  SLTEVQCTSPT--------PGKFDEIGDTVDTSERSKDVPDTVDETDTLSDIDDCEVNCY 683
            ++ +   T P+          K  E+G      E SK  PD   + ++ SDIDD EV+ Y
Sbjct: 521  AIGDKSLTIPSEQNANDNIASKDPEVG-----GENSK--PDA--DPESFSDIDDVEVDGY 571

Query: 684  LNNAEESRYKKIIWEQMNKEYMXXXXXXXXXXXXXRKLYTGTSXXXXXXXXXXXXXXXXX 863
            L+N EE+ YKKIIWE+MNKEY+                  G                   
Sbjct: 572  LHNEEETHYKKIIWEEMNKEYIEEQAAKEALAAELAARGVGMG----------------- 614

Query: 864  XXXXXXXXXXXXXXXXXXXPAQTAAEAAGQLFTKKKLSSKINYDVLNTLFDDEPSPKKNH 1043
                               PA+T AEA   +  +K L SKIN + +  L++ +    + +
Sbjct: 615  --GGQQKKRRRNEDTKNLSPAETPAEATYNMLKRKGLGSKINVEAVGGLYNTKDEEGEAN 672

Query: 1044 VDGD 1055
              GD
Sbjct: 673  EKGD 676


>gb|EEC78942.1| hypothetical protein OsI_19387 [Oryza sativa Indica Group]
          Length = 521

 Score =  187 bits (475), Expect = 6e-45
 Identities = 113/255 (44%), Positives = 159/255 (62%), Gaps = 6/255 (2%)
 Frame = +3

Query: 3   GRKPSGICAAAIYVSSVLHGYNFSRADVVKAVHICEATLTKRLIEFENTKAGSLTIEEFT 182
           GRKPSG+C AA+Y++++ HGY++++AD+V  VH+CEATLTKRLIEFENT +GSLTIEEF 
Sbjct: 160 GRKPSGLCGAALYIAALSHGYDYTKADIVAVVHVCEATLTKRLIEFENTDSGSLTIEEFL 219

Query: 183 EHAMAFEKEMQSCKQSVKDPKMPGLTEVVCQHKSNAVQSGFGLCKNCYLEF---CGGLE- 350
             A   ++++   K S      P   EV+C+HK  A     GLC+ CY +F    GGLE 
Sbjct: 220 AKA---DEQVLVTKIS------PKSGEVLCKHKDKAEHFAHGLCEKCYNKFMKLSGGLEG 270

Query: 351 GSEPPAFQRAEMERVAMEPVEMSTESASCKEPPRKTNENDNGTQHNSEPNANLKETGKGS 530
           GS+PPAFQRAE +R  +E  + +  +A+ KE   ++          S+   N+    K  
Sbjct: 271 GSDPPAFQRAEKQR--LEAAKNAKGTAASKEAALES----VCEARESDVENNITTPPKNI 324

Query: 531 LTEVQCTSPTPGKFDEIGDTVDTSE-RSKDVPDTVDE-TDTLSDIDDCEVNCYLNNAEES 704
           + +   T P+       GD+V T +   +   D  DE  ++LSDIDD EV+ YL+N EE+
Sbjct: 325 IGDKHSTIPS---VKVAGDSVATEDPEGEGKNDKADEGPESLSDIDDAEVDGYLHNEEET 381

Query: 705 RYKKIIWEQMNKEYM 749
           +YKKIIWE+MNKEY+
Sbjct: 382 QYKKIIWEEMNKEYL 396


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