BLASTX nr result

ID: Atractylodes21_contig00026234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026234
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containi...   248   4e-64
ref|XP_002513996.1| pentatricopeptide repeat-containing protein,...   238   3e-61
emb|CBI19224.3| unnamed protein product [Vitis vinifera]              237   7e-61
ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|2...   235   3e-60
ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containi...   233   1e-59

>ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Vitis vinifera]
          Length = 475

 Score =  248 bits (633), Expect = 4e-64
 Identities = 116/178 (65%), Positives = 149/178 (83%), Gaps = 1/178 (0%)
 Frame = -1

Query: 534 TLASIYKKSGLVEKANLALGTAEQKLSSYDHFGYFFLITNYASLKNKTGVLRLWEACKRV 355
           TLA+IY KSGL++KANLAL  AE+KLS+++  GYFFLIT YASL NK  VLRLWEA K+V
Sbjct: 223 TLANIYLKSGLIKKANLALKNAEKKLSAHNRLGYFFLITMYASLSNKEEVLRLWEASKKV 282

Query: 354 DQKLTCANYMCMMQCLVKLGDVREAEKIFIEWESQCRRYDVRVSNILLGAYVRDGLMEKA 175
             ++T  NYMC++ CLVKLGD+ EAE+IF EWES+C +YD+RVSN+LLGAY+R G M+KA
Sbjct: 283 GGRITSTNYMCILLCLVKLGDIAEAERIFREWESKCWKYDIRVSNVLLGAYMRTGSMDKA 342

Query: 174 EELHLHTLKKGGCPNYKTWEILMEGYVRNRNMEKAIVAMKESVK-VKSCDWKPSPTIV 4
           E LHLHTL++GGCPNYKTWEILMEG+++++NM+KAI AMK+    +K CDW+P+  +V
Sbjct: 343 ESLHLHTLERGGCPNYKTWEILMEGWMKSQNMDKAINAMKKGFSMLKHCDWRPNHGLV 400


>ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547082|gb|EEF48579.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 496

 Score =  238 bits (608), Expect = 3e-61
 Identities = 112/178 (62%), Positives = 145/178 (81%), Gaps = 1/178 (0%)
 Frame = -1

Query: 534 TLASIYKKSGLVEKANLALGTAEQKLSSYDHFGYFFLITNYASLKNKTGVLRLWEACKRV 355
           TLA+IY K+G+V+KA LAL  AE+ LS+    GYFFL+T Y+SLKNK GV RLWEACK V
Sbjct: 242 TLANIYTKAGIVDKALLALKNAEKILSTSHLLGYFFLMTQYSSLKNKEGVQRLWEACKGV 301

Query: 354 DQKLTCANYMCMMQCLVKLGDVREAEKIFIEWESQCRRYDVRVSNILLGAYVRDGLMEKA 175
           + ++TCANYMC++ CLVK+GD+ EAEK+F +WE  CR+YD+RVSN+LLGAYVR GLM KA
Sbjct: 302 NGRITCANYMCVLSCLVKVGDLLEAEKVFRDWELNCRKYDIRVSNVLLGAYVRKGLMNKA 361

Query: 174 EELHLHTLKKGGCPNYKTWEILMEGYVRNRNMEKAIVAMKESVK-VKSCDWKPSPTIV 4
           E LHLHTL +GGCPNYKT EILMEG+V+++ M+KAI AM +++  ++ C W+PS  I+
Sbjct: 362 ESLHLHTLDRGGCPNYKTLEILMEGWVKSQKMDKAIDAMTQAISMLEHCHWRPSHGII 419


>emb|CBI19224.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score =  237 bits (605), Expect = 7e-61
 Identities = 110/165 (66%), Positives = 140/165 (84%)
 Frame = -1

Query: 534 TLASIYKKSGLVEKANLALGTAEQKLSSYDHFGYFFLITNYASLKNKTGVLRLWEACKRV 355
           TLA+IY KSGL++KANLAL  AE+KLS+++  GYFFLIT YASL NK  VLRLWEA K+V
Sbjct: 250 TLANIYLKSGLIKKANLALKNAEKKLSAHNRLGYFFLITMYASLSNKEEVLRLWEASKKV 309

Query: 354 DQKLTCANYMCMMQCLVKLGDVREAEKIFIEWESQCRRYDVRVSNILLGAYVRDGLMEKA 175
             ++T  NYMC++ CLVKLGD+ EAE+IF EWES+C +YD+RVSN+LLGAY+R G M+KA
Sbjct: 310 GGRITSTNYMCILLCLVKLGDIAEAERIFREWESKCWKYDIRVSNVLLGAYMRTGSMDKA 369

Query: 174 EELHLHTLKKGGCPNYKTWEILMEGYVRNRNMEKAIVAMKESVKV 40
           E LHLHTL++GGCPNYKTWEILMEG+++++NM+KAI AMK+   +
Sbjct: 370 ESLHLHTLERGGCPNYKTWEILMEGWMKSQNMDKAINAMKKGFSI 414


>ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|222856799|gb|EEE94346.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  235 bits (600), Expect = 3e-60
 Identities = 110/180 (61%), Positives = 145/180 (80%), Gaps = 3/180 (1%)
 Frame = -1

Query: 534 TLASIYKKSGLVEKANLALGTAEQKLSSYDHFGYFFLITNYASLKNKTGVLRLWEACKRV 355
           +LA++Y K+G V+KA L L  AE KLS+    GYFFLIT Y+SLKNK GVLRLWEA K V
Sbjct: 258 SLANVYIKAGFVDKALLVLKDAEMKLSTNGRLGYFFLITLYSSLKNKEGVLRLWEASKAV 317

Query: 354 DQKLTCANYMCMMQCLVKLGDVREAEKIFIEWESQCRRYDVRVSNILLGAYVRDGLMEKA 175
             ++ CA+YMC++ CLVK+GD+  AE++F EWE+ C +YD+RVSN+LLGAYVR+GLM KA
Sbjct: 318 GGRIPCADYMCVISCLVKVGDLVAAEQVFAEWETNCFKYDIRVSNVLLGAYVRNGLMGKA 377

Query: 174 EELHLHTLKKGGCPNYKTWEILMEGYVRNRNMEKAIVAMKES---VKVKSCDWKPSPTIV 4
           E  HLHT+++GGCPNYKTWEILMEG+V+++ M+KAI AMK+    +KV+ CDW+PS +I+
Sbjct: 378 ESFHLHTVERGGCPNYKTWEILMEGWVKSQKMDKAIDAMKKGFSVLKVERCDWRPSHSIL 437


>ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Glycine max]
          Length = 496

 Score =  233 bits (595), Expect = 1e-59
 Identities = 111/178 (62%), Positives = 145/178 (81%), Gaps = 1/178 (0%)
 Frame = -1

Query: 534 TLASIYKKSGLVEKANLALGTAEQKLSSYDHFGYFFLITNYASLKNKTGVLRLWEACKRV 355
           TLA+ YKK+G  +KA L L  AE+KLS+ +  G+FFLIT YASLK+K GVLRLWEA K V
Sbjct: 244 TLANAYKKAGQSKKAILVLKDAEKKLSTCNRLGHFFLITLYASLKDKEGVLRLWEASKAV 303

Query: 354 DQKLTCANYMCMMQCLVKLGDVREAEKIFIEWESQCRRYDVRVSNILLGAYVRDGLMEKA 175
             +++CANY+C++ CLVKLGD+ +A++IF+EWES C++YD+RVSN+LLGAYVR+GLME+A
Sbjct: 304 RGRISCANYICILTCLVKLGDIVQAKRIFLEWESNCQKYDIRVSNVLLGAYVRNGLMEEA 363

Query: 174 EELHLHTLKKGGCPNYKTWEILMEGYVRNRNMEKAIVAMKESV-KVKSCDWKPSPTIV 4
           E LHLHTL+KGGCPNYKT EILMEGYV  + M++AI+ MK ++  +K C W+P   IV
Sbjct: 364 ESLHLHTLQKGGCPNYKTLEILMEGYVNWQKMDEAIITMKRALAMMKDCHWRPPHGIV 421


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