BLASTX nr result

ID: Atractylodes21_contig00026151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026151
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...    89   2e-15
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    86   1e-14
ref|XP_002516804.1| conserved hypothetical protein [Ricinus comm...    83   1e-13
ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat...    81   4e-13
ref|XP_003618693.1| F-box/kelch-repeat protein [Medicago truncat...    75   2e-11

>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 4/161 (2%)
 Frame = +1

Query: 28  GTFLNGSLHWLAHHCRNNDENRIIASFNVNEETFRDLSLPP----QEASLPYNILGVLQG 195
           G F++G+L+W A+H   +    +I S ++++ET+R++ LPP    ++ S P   LGVLQG
Sbjct: 248 GKFVSGTLNWAANHSIGSSSLWVIVSLDLHKETYREV-LPPDYEKEDCSTPG--LGVLQG 304

Query: 196 CLSTLCNDMYYTNADIWLMKEYGVVNSWTKFIKIPLNMGIENISHMMPXXXXXXXXXXXX 375
           CL  +  D   T+  +W+MK+YG   SW K + IP     EN S+  P            
Sbjct: 305 CLC-MNYDYKKTHFVVWMMKDYGARESWVKLVSIPYVPNPENFSYSGPYYISENGEVLLM 363

Query: 376 XXXQSFVIYNVKKKAFRHVTMAHDLKWFGDAAVYVESLLSP 498
                 ++YN +  +F++  +     WF DA VYVE+L+SP
Sbjct: 364 FEF-DLILYNPRDNSFKYPKIESGKGWF-DAEVYVETLVSP 402


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 4/161 (2%)
 Frame = +1

Query: 28  GTFLNGSLHWLAHHCRNNDENRIIASFNVNEETFRDLSLPP----QEASLPYNILGVLQG 195
           G F++G+L+W A+H        +I S ++++ET+R++ LPP    ++ S P   LGVLQG
Sbjct: 249 GKFVSGTLNWAANHSIGPSSFWVIVSLDLHKETYREV-LPPDYEKEDCSTPS--LGVLQG 305

Query: 196 CLSTLCNDMYYTNADIWLMKEYGVVNSWTKFIKIPLNMGIENISHMMPXXXXXXXXXXXX 375
           CL  +  D   T+  +W+MK+YGV  SW K + IP     E+ S+  P            
Sbjct: 306 CLC-MNYDYKKTHFVVWMMKDYGVRESWVKLVSIPYVPNPEDFSYSGPYYISENGKVLLM 364

Query: 376 XXXQSFVIYNVKKKAFRHVTMAHDLKWFGDAAVYVESLLSP 498
                 ++Y+ +  +F++  +     WF DA VYVE+L+SP
Sbjct: 365 FEF-DLILYDPRNNSFKYPKIESGKGWF-DAEVYVETLVSP 403


>ref|XP_002516804.1| conserved hypothetical protein [Ricinus communis]
           gi|223543892|gb|EEF45418.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 316

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
 Frame = +1

Query: 19  DTVGTFLNGSLHWLAHHCRNNDENRIIASFNVNEETFRDLSLPPQEASLPYNILGVLQGC 198
           D  G ++N +L+W      ++    II SF++  ET++++  P     +    LGVL GC
Sbjct: 154 DVSGKYVNCTLNWPVMSEGDSGLMWIIVSFDIKRETYKEVMQPDYGELVYDRTLGVLDGC 213

Query: 199 LSTLCNDMYYTNADIWLMKEYGVVNSWTKFIKIPL--NMGIENISHMMPXXXXXXXXXXX 372
           L  +CN  +   AD W+MKEYGV  SW + + +P     G  ++ + +P           
Sbjct: 214 LCVMCN-YHAVRADFWVMKEYGVRESWIRLVTVPYLDYPGSLHLQYSVP-YAIADNGEVL 271

Query: 373 XXXXQSFVIYNVKKKAFRHVTMAHDLKWFGDAAVYVESLLSPE 501
                S VIYN     F++  + +   W  DA VY++SL+SP+
Sbjct: 272 LEFKSSLVIYNPNYGTFKYPVINNSCSWV-DAEVYIDSLVSPK 313


>ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 366

 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
 Frame = +1

Query: 28  GTFLNGSLHWLAHHCRNNDENRIIASFNVNEETFRDLSLPP----QEASLPYNILGVLQG 195
           G F++G+L+W +++   +     I S ++ +ET+R++ LPP    +E S P   L VL+G
Sbjct: 209 GKFVSGTLNWASNYSIGSSSFWTIVSLDLEKETYREV-LPPDYEKEECSTPS--LSVLKG 265

Query: 196 CLSTLCNDMYYTNAD--IWLMKEYGVVNSWTKFIKIPLNMGIENISHMMPXXXXXXXXXX 369
           CL   C +  Y   D  +WLMK+YGV  SW K + IP     E+ S+  P          
Sbjct: 266 CL---CMNYDYKKTDFVVWLMKDYGVRESWIKLLTIPYLPNPEDFSYSGPYCISENGEVL 322

Query: 370 XXXXXQSFVIYNVKKKAFRHVTMAHDLKWFGDAAVYVESLLSP 498
                   ++Y+ +  +FR+  +     WF DA VYVESL+SP
Sbjct: 323 LMFEF-DLILYDPRDHSFRYPRIEGGKGWF-DAEVYVESLVSP 363


>ref|XP_003618693.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355493708|gb|AES74911.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 378

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
 Frame = +1

Query: 4   SYDFIDTVGTFLNGSLHWLAHHCRNNDENRIIASFNVNEETFRDLSLPPQE-ASLPYNIL 180
           ++  I   G FL+ SLHWL +  R+    ++I S ++ +E++++ S P  +  S  YN L
Sbjct: 203 NHHLIQGPGIFLSDSLHWLPYDGRSGSSGKVIVSLHLQKESYQEFSHPLYDIQSETYNTL 262

Query: 181 GVLQGCLSTLCN-DMYYTNADIWLMKEYGVVNSWTKFIKIP 300
           GVL+ CL    N D ++   D+W+MKEYG   SWTK + +P
Sbjct: 263 GVLRDCLCIFSNSDKFF---DVWIMKEYGNGQSWTKLLSVP 300


Top