BLASTX nr result

ID: Atractylodes21_contig00026143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026143
         (1257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q96033.1|RT12_HELAN RecName: Full=Ribosomal protein S12, mito...   237   4e-60
ref|YP_005090462.1| ribosomal protein S12 (mitochondrion) [Mille...   235   2e-59
ref|YP_588353.1| ribosomal protein S12 [Zea mays subsp. mays] gi...   234   3e-59
ref|NP_064075.2| rps12 gene product (mitochondrion) [Beta vulgar...   234   3e-59
emb|CAA89889.1| ribosomal protein S12 [Magnolia x soulangeana]        233   6e-59

>sp|Q96033.1|RT12_HELAN RecName: Full=Ribosomal protein S12, mitochondrial
           gi|1518351|emb|CAA89857.1| ribosomal protein S12
           [Helianthus annuus]
          Length = 125

 Score =  237 bits (605), Expect = 4e-60
 Identities = 116/120 (96%), Positives = 116/120 (96%)
 Frame = -3

Query: 469 TLNQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSAPRKIAKVRLSNRHD 290
           TLNQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSA RKIAKVRLSNRHD
Sbjct: 3   TLNQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNRHD 62

Query: 289 IFAYIPGEGHNLQEHSIVLIRGGRVKDLPGVKFHCIRGVKDLLGIPHRRKRRSKYGAENP 110
           IFAYIPGEGHNLQEHSIVLIRGGRVKDLPGVKFHCIRGVKDLLGIP RRK RSKYGAE P
Sbjct: 63  IFAYIPGEGHNLQEHSIVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRKGRSKYGAEKP 122


>ref|YP_005090462.1| ribosomal protein S12 (mitochondrion) [Millettia pinnata]
           gi|372450318|ref|YP_005090500.1| ribosomal protein S12
           (mitochondrion) [Lotus japonicus]
           gi|316996005|dbj|BAD83444.2| ribosomal protein S12
           (mitochondrion) [Nicotiana tabacum]
           gi|357197325|gb|AET62922.1| ribosomal protein S12
           (mitochondrion) [Millettia pinnata]
           gi|357197364|gb|AET62960.1| ribosomal protein S12
           (mitochondrion) [Lotus japonicus]
          Length = 125

 Score =  235 bits (599), Expect = 2e-59
 Identities = 114/120 (95%), Positives = 116/120 (96%)
 Frame = -3

Query: 469 TLNQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSAPRKIAKVRLSNRHD 290
           TLNQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSA RKIAKVRLSNRHD
Sbjct: 3   TLNQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNRHD 62

Query: 289 IFAYIPGEGHNLQEHSIVLIRGGRVKDLPGVKFHCIRGVKDLLGIPHRRKRRSKYGAENP 110
           IFAYIPGEGHNLQEHS+VLIRGGRVKDLPGVKFHCIRGVKDLLGIP RR+ RSKYGAE P
Sbjct: 63  IFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGAEKP 122


>ref|YP_588353.1| ribosomal protein S12 [Zea mays subsp. mays]
           gi|38605685|sp|P60098.1|RT12_WHEAT RecName:
           Full=Ribosomal protein S12, mitochondrial
           gi|38605686|sp|P60099.1|RT12_MAIZE RecName:
           Full=Ribosomal protein S12, mitochondrial
           gi|40795073|gb|AAR91117.1| ribosomal protein S12
           (mitochondrion) [Zea mays]
          Length = 125

 Score =  234 bits (598), Expect = 3e-59
 Identities = 114/120 (95%), Positives = 115/120 (95%)
 Frame = -3

Query: 469 TLNQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSAPRKIAKVRLSNRHD 290
           T NQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSA RKIAKVRLSNRHD
Sbjct: 3   TKNQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNRHD 62

Query: 289 IFAYIPGEGHNLQEHSIVLIRGGRVKDLPGVKFHCIRGVKDLLGIPHRRKRRSKYGAENP 110
           IFAYIPGEGHNLQEHSIVL+RGGRVKDLPGVKFHCIRGVKDLLGIP RRK RSKYGAE P
Sbjct: 63  IFAYIPGEGHNLQEHSIVLVRGGRVKDLPGVKFHCIRGVKDLLGIPDRRKGRSKYGAERP 122


>ref|NP_064075.2| rps12 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435095|ref|YP_004222313.1| ribosomal protein S12
           [Beta vulgaris subsp. maritima]
           gi|346683187|ref|YP_004842119.1| ribosomal protein S12
           [Beta macrocarpa] gi|87248036|gb|ABD36073.1| ribosomal
           protein S12 [Beta vulgaris subsp. vulgaris]
           gi|148491434|dbj|BAA99468.2| ribosomal protein S12 [Beta
           vulgaris subsp. vulgaris] gi|317905649|emb|CBJ14048.1|
           ribosomal protein S12 [Beta vulgaris subsp. maritima]
           gi|319439828|emb|CBJ17539.1| ribosomal protein S12 [Beta
           vulgaris subsp. maritima] gi|320148728|emb|CBJ23366.1|
           ribosomal protein S12 [Beta vulgaris subsp. maritima]
           gi|345500105|emb|CBX24923.1| ribosomal protein S12 [Beta
           macrocarpa] gi|384939150|emb|CBL51997.1| ribosomal
           protein S12 (mitochondrion) [Beta vulgaris subsp.
           maritima]
          Length = 125

 Score =  234 bits (597), Expect = 3e-59
 Identities = 113/120 (94%), Positives = 116/120 (96%)
 Frame = -3

Query: 469 TLNQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSAPRKIAKVRLSNRHD 290
           T+NQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSA RKIAKVRLSNRHD
Sbjct: 3   TINQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNRHD 62

Query: 289 IFAYIPGEGHNLQEHSIVLIRGGRVKDLPGVKFHCIRGVKDLLGIPHRRKRRSKYGAENP 110
           IFAYIPGEGHNLQEHS+VLIRGGRVKDLPGVKFHCIRGVKDLLGIP RR+ RSKYGAE P
Sbjct: 63  IFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDRRRGRSKYGAEKP 122


>emb|CAA89889.1| ribosomal protein S12 [Magnolia x soulangeana]
          Length = 125

 Score =  233 bits (595), Expect = 6e-59
 Identities = 113/120 (94%), Positives = 116/120 (96%)
 Frame = -3

Query: 469 TLNQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSAPRKIAKVRLSNRHD 290
           TLNQLIRHGREEKRRTDRTRALDQCPQKQGVCLRV TRTPKKPNSA RKIAKVRLSNRHD
Sbjct: 3   TLNQLIRHGREEKRRTDRTRALDQCPQKQGVCLRVLTRTPKKPNSALRKIAKVRLSNRHD 62

Query: 289 IFAYIPGEGHNLQEHSIVLIRGGRVKDLPGVKFHCIRGVKDLLGIPHRRKRRSKYGAENP 110
           IFAYIPGEGHNLQEHS+VLIRGGRVKDLPGVKFHCIRGVKDLLGIP+RR+ RSKYGAE P
Sbjct: 63  IFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPNRRRGRSKYGAERP 122


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