BLASTX nr result

ID: Atractylodes21_contig00026119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026119
         (872 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40419.3| unnamed protein product [Vitis vinifera]              169   8e-40
emb|CAN73279.1| hypothetical protein VITISV_040608 [Vitis vinifera]   169   8e-40
ref|XP_003552426.1| PREDICTED: RING-H2 finger protein ATL68-like...   159   8e-37
ref|XP_004133841.1| PREDICTED: RING-H2 finger protein ATL67-like...   151   2e-34
ref|XP_002880221.1| zinc finger family protein [Arabidopsis lyra...   149   6e-34

>emb|CBI40419.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score =  169 bits (428), Expect = 8e-40
 Identities = 88/168 (52%), Positives = 109/168 (64%), Gaps = 3/168 (1%)
 Frame = -3

Query: 648 YLEHLNLGYAIXXXXXXXXXXXXXXXXSYMCFRHRYRRRH---NQTQIQNPNDNGVILPN 478
           YL +L LGYAI                SY+C R R    H   N     N +D G++LP 
Sbjct: 84  YLSNLGLGYAIAIAFAFLVLLSTVLLASYLCCRRRPLSPHHSRNPASAANSSD-GIVLPR 142

Query: 477 IFFVDESNNDDEELSGVVGLDEAVFNSYPKFPFSKGIRTGIDSICAICLCEYRDAEMMRM 298
           I FV E  ++D+ +  VVGLD+AV +SYPKFPFSK   T +DS+C+ICLCEY+D+EM+RM
Sbjct: 143 IIFVAEDEDEDQNV--VVGLDQAVIDSYPKFPFSKS-NTHLDSVCSICLCEYKDSEMLRM 199

Query: 297 LPDCKHCFHLTCVDAWLKLNATCPVCRXXXXXXXXXXXLAEVVPLSQY 154
           LPDC+HCFHL CVDAWLKLNA+CPVCR           L+E+VPLSQY
Sbjct: 200 LPDCRHCFHLYCVDAWLKLNASCPVCRNSPLPTPLSTPLSELVPLSQY 247


>emb|CAN73279.1| hypothetical protein VITISV_040608 [Vitis vinifera]
          Length = 641

 Score =  169 bits (428), Expect = 8e-40
 Identities = 88/168 (52%), Positives = 109/168 (64%), Gaps = 3/168 (1%)
 Frame = -3

Query: 648 YLEHLNLGYAIXXXXXXXXXXXXXXXXSYMCFRHRYRRRH---NQTQIQNPNDNGVILPN 478
           YL +L LGYAI                SY+C R R    H   N     N +D G++LP 
Sbjct: 27  YLSNLGLGYAIAIAFAFLVLLSTVLLASYLCCRRRPLSPHHSRNPASAANSSD-GIVLPR 85

Query: 477 IFFVDESNNDDEELSGVVGLDEAVFNSYPKFPFSKGIRTGIDSICAICLCEYRDAEMMRM 298
           I FV E  ++D+ +  VVGLD+AV +SYPKFPFSK   T +DS+C+ICLCEY+D+EM+RM
Sbjct: 86  IIFVAEDEDEDQNV--VVGLDQAVIDSYPKFPFSKS-NTHLDSVCSICLCEYKDSEMLRM 142

Query: 297 LPDCKHCFHLTCVDAWLKLNATCPVCRXXXXXXXXXXXLAEVVPLSQY 154
           LPDC+HCFHL CVDAWLKLNA+CPVCR           L+E+VPLSQY
Sbjct: 143 LPDCRHCFHLYCVDAWLKLNASCPVCRNSPLPTPLSTPLSELVPLSQY 190


>ref|XP_003552426.1| PREDICTED: RING-H2 finger protein ATL68-like [Glycine max]
          Length = 179

 Score =  159 bits (402), Expect = 8e-37
 Identities = 79/169 (46%), Positives = 107/169 (63%), Gaps = 3/169 (1%)
 Frame = -3

Query: 648 YLEHLNLGYAIXXXXXXXXXXXXXXXXSYMCFRHRYRRRHNQTQIQNP-NDNGVILPNIF 472
           +  HL LGY+I                SY+C RH  RRRH QT      +D G++LP + 
Sbjct: 5   HFPHLGLGYSIAIALAFLFLLSTLLLSSYLCCRHN-RRRHTQTTASAAASDGGIVLPRVI 63

Query: 471 FVDESNNDDEELSGVVGLDEAVFNSYPKFPFSKG--IRTGIDSICAICLCEYRDAEMMRM 298
           FV E +++D +   VVGLD++V NSYP+F F+K    R  I++ C+ICLCEY+D+EM+RM
Sbjct: 64  FVAEDDDEDADACMVVGLDQSVINSYPRFQFNKDSDARNIINTTCSICLCEYKDSEMLRM 123

Query: 297 LPDCKHCFHLTCVDAWLKLNATCPVCRXXXXXXXXXXXLAEVVPLSQYS 151
           +P+C+H FHL C+D+WLKLN +CPVCR           L EVVPLSQY+
Sbjct: 124 MPECRHYFHLCCLDSWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYA 172


>ref|XP_004133841.1| PREDICTED: RING-H2 finger protein ATL67-like [Cucumis sativus]
           gi|449480258|ref|XP_004155843.1| PREDICTED: RING-H2
           finger protein ATL67-like [Cucumis sativus]
          Length = 184

 Score =  151 bits (381), Expect = 2e-34
 Identities = 78/170 (45%), Positives = 101/170 (59%), Gaps = 4/170 (2%)
 Frame = -3

Query: 651 YYLEHLNLGYAIXXXXXXXXXXXXXXXXSYMCFR-HRYRRRHNQTQIQNPNDNGVILPNI 475
           Y    + LGY+I                 Y+C R  R R         + +D G+ILP I
Sbjct: 8   YSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPSSRSDAGIILPQI 67

Query: 474 FFV--DESNNDDEELSGVVGLDEAVFNSYPKFPFSKG-IRTGIDSICAICLCEYRDAEMM 304
            FV  D++  D ++ +GVVGLD+ V NSYPKFPFS+     G + +C+ICLCEY+DAEM+
Sbjct: 68  IFVAEDDAAPDRDDDNGVVGLDQTVINSYPKFPFSRDKSMAGANCVCSICLCEYKDAEML 127

Query: 303 RMLPDCKHCFHLTCVDAWLKLNATCPVCRXXXXXXXXXXXLAEVVPLSQY 154
           RM+P+C+H FHL C+DAWLKLN +CPVCR           L EVVPLSQY
Sbjct: 128 RMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQY 177


>ref|XP_002880221.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326060|gb|EFH56480.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 214

 Score =  149 bits (377), Expect = 6e-34
 Identities = 87/183 (47%), Positives = 107/183 (58%), Gaps = 15/183 (8%)
 Frame = -3

Query: 654 HYYLEHLNLGYAIXXXXXXXXXXXXXXXXSYMCFRHRYRRRHNQTQIQNPNDNG--VILP 481
           H YL  L  GY+I                SY+C R   RR    T +++  D+G  VILP
Sbjct: 27  HSYLTTLGFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRT---TAVESAGDHGGSVILP 83

Query: 480 NIFFVDESNNDDEELSGVV-GLDEAVFNSYPKFPFSK--------GIRTGIDSICAICLC 328
            I FV E +N+D E   VV GLD+AV NSYPKF FSK        G   G D+ C+ICLC
Sbjct: 84  RIIFVAEEDNEDLEAGDVVVGLDQAVINSYPKFHFSKDSSAASSDGFGGGGDTTCSICLC 143

Query: 327 EYRDAEMMRMLPDCKHCFHLTCVDAWLKLNATCPVCR----XXXXXXXXXXXLAEVVPLS 160
           EY++AEM+RM+P+CKH FHL C+DAWLKLN +CPVCR               L+EVVPLS
Sbjct: 144 EYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEVVPLS 203

Query: 159 QYS 151
           QY+
Sbjct: 204 QYA 206


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