BLASTX nr result

ID: Atractylodes21_contig00026103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026103
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298062.1| f-box family protein [Populus trichocarpa] g...    80   2e-13
dbj|BAJ94964.1| predicted protein [Hordeum vulgare subsp. vulgare]     80   2e-13
ref|XP_003521314.1| PREDICTED: F-box protein PP2-A13-like [Glyci...    73   3e-11
ref|XP_002318243.1| f-box family protein [Populus trichocarpa] g...    72   4e-11
ref|XP_002304470.1| f-box family protein [Populus trichocarpa] g...    72   5e-11

>ref|XP_002298062.1| f-box family protein [Populus trichocarpa]
           gi|222845320|gb|EEE82867.1| f-box family protein
           [Populus trichocarpa]
          Length = 299

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/57 (71%), Positives = 43/57 (75%)
 Frame = -1

Query: 172 LCNPPSAPVVPPETGLGDLPESVVASVLVHLNPQEICRLAALNRAFRGASSADFVWE 2
           LC  PS P    + GLGDLPES VA VL +LNP EICRLA LNRAFRGAS ADFVWE
Sbjct: 21  LCLQPSPPPPRIKPGLGDLPESCVALVLEYLNPSEICRLAKLNRAFRGASWADFVWE 77


>dbj|BAJ94964.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 302

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/67 (59%), Positives = 45/67 (67%)
 Frame = -1

Query: 202 MGSGFSSFLVLCNPPSAPVVPPETGLGDLPESVVASVLVHLNPQEICRLAALNRAFRGAS 23
           MG+G SSFL     P+A   P   GLGDLPE   A VL+ L+  EICRLA LN AFRGA+
Sbjct: 1   MGAGVSSFLFGVGGPAAEAAPGAAGLGDLPELCAAQVLLRLDAPEICRLARLNHAFRGAA 60

Query: 22  SADFVWE 2
            ADFVWE
Sbjct: 61  GADFVWE 67


>ref|XP_003521314.1| PREDICTED: F-box protein PP2-A13-like [Glycine max]
          Length = 281

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/67 (56%), Positives = 49/67 (73%)
 Frame = -1

Query: 202 MGSGFSSFLVLCNPPSAPVVPPETGLGDLPESVVASVLVHLNPQEICRLAALNRAFRGAS 23
           MG+ FSS   +C+    P+ P    LGD+PES VA VL++L+P +IC+LA LNRAFR AS
Sbjct: 1   MGASFSS--CVCDGDGTPLRPR---LGDIPESCVALVLMYLDPPDICKLARLNRAFRDAS 55

Query: 22  SADFVWE 2
           SADF+WE
Sbjct: 56  SADFIWE 62


>ref|XP_002318243.1| f-box family protein [Populus trichocarpa]
           gi|222858916|gb|EEE96463.1| f-box family protein
           [Populus trichocarpa]
          Length = 285

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/67 (55%), Positives = 47/67 (70%)
 Frame = -1

Query: 202 MGSGFSSFLVLCNPPSAPVVPPETGLGDLPESVVASVLVHLNPQEICRLAALNRAFRGAS 23
           MG+G SS  +     S+PV P    L D+PES VAS+L+HL+P EIC+LA +N+ F GAS
Sbjct: 1   MGAGSSSLALESEGGSSPVRP---NLDDIPESSVASILMHLDPPEICKLAKVNKTFHGAS 57

Query: 22  SADFVWE 2
            ADFVWE
Sbjct: 58  LADFVWE 64


>ref|XP_002304470.1| f-box family protein [Populus trichocarpa]
           gi|222841902|gb|EEE79449.1| f-box family protein
           [Populus trichocarpa]
          Length = 298

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/49 (73%), Positives = 39/49 (79%), Gaps = 2/49 (4%)
 Frame = -1

Query: 142 PPET--GLGDLPESVVASVLVHLNPQEICRLAALNRAFRGASSADFVWE 2
           PP T   LGDLPE  VA +L +LNPQEIC+LA LNRAFRGAS ADFVWE
Sbjct: 28  PPATKPSLGDLPEGCVALILEYLNPQEICKLARLNRAFRGASWADFVWE 76


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