BLASTX nr result

ID: Atractylodes21_contig00026068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026068
         (1077 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25341.3| unnamed protein product [Vitis vinifera]              325   1e-86
emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]   325   1e-86
ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   324   2e-86
ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago t...   288   1e-75
ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   284   2e-74

>emb|CBI25341.3| unnamed protein product [Vitis vinifera]
          Length = 1717

 Score =  325 bits (833), Expect = 1e-86
 Identities = 179/258 (69%), Positives = 200/258 (77%), Gaps = 6/258 (2%)
 Frame = +1

Query: 1    DDRQNKPPD-ASFHAFRS---SEASVIVNGSYSTKIAAVTRRILCIGSTNPKDKILVFSS 168
            DDRQ K  D A  H  +S   SEASVIV GSY TKI AVTRRIL I  T PK KILVFSS
Sbjct: 1459 DDRQTKSCDSAELHTVQSVEKSEASVIVQGSYGTKIEAVTRRILWIKCTEPKAKILVFSS 1518

Query: 169  WNDVLDVLEHAFTANDISFIRMKGGRKSHVAISQFXXXXXXXXXXXXXXXXQVEPNS--V 342
            WNDVL+VLEHA  AN+I+++RMKGGRKSHVAIS F                Q EP    V
Sbjct: 1519 WNDVLNVLEHALNANNITYVRMKGGRKSHVAISHFRRQRTSAEGNGQTHAQQPEPEPEFV 1578

Query: 343  QVMLLLIQHGANGLNLLEAQHVILVEPLLNPAAEAQAISRVHRIGQTKKTLVHRFIVKST 522
            QV+LLLIQHGANGLNLLEAQHV+LVEPLLNPAAEAQAISRVHRIGQ  +TLVHRFIVK T
Sbjct: 1579 QVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQENRTLVHRFIVKDT 1638

Query: 523  VEESIYKLNKSKDSGSFISGNKKNQDQPVLTLKDVESLFKVAPSTVEQPKKEEPTSSLMH 702
            VEESIYKLN+S+++ SFISGN KNQDQP+LTLKD+E+LF   PS+V Q  +E+PT SLMH
Sbjct: 1639 VEESIYKLNRSRNTNSFISGNTKNQDQPLLTLKDLEALFTPVPSSVPQ-SEEKPTGSLMH 1697

Query: 703  LPPATAAGIAAERRLMEQ 756
            LPP+ AA IAAERRL +Q
Sbjct: 1698 LPPSVAAAIAAERRLKQQ 1715


>emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]
          Length = 2416

 Score =  325 bits (833), Expect = 1e-86
 Identities = 179/258 (69%), Positives = 200/258 (77%), Gaps = 6/258 (2%)
 Frame = +1

Query: 1    DDRQNKPPD-ASFHAFRS---SEASVIVNGSYSTKIAAVTRRILCIGSTNPKDKILVFSS 168
            DDRQ K  D A  H  +S   SEASVIV GSY TKI AVTRRIL I  T PK KILVFSS
Sbjct: 2158 DDRQTKSCDSAELHTVQSXEKSEASVIVQGSYGTKIEAVTRRILWIKCTEPKAKILVFSS 2217

Query: 169  WNDVLDVLEHAFTANDISFIRMKGGRKSHVAISQFXXXXXXXXXXXXXXXXQVEPNS--V 342
            WNDVL+VLEHA  AN+I+++RMKGGRKSHVAIS F                Q EP    V
Sbjct: 2218 WNDVLNVLEHALNANNITYVRMKGGRKSHVAISHFRRQRTSAEGNGQTHAQQPEPEPEFV 2277

Query: 343  QVMLLLIQHGANGLNLLEAQHVILVEPLLNPAAEAQAISRVHRIGQTKKTLVHRFIVKST 522
            QV+LLLIQHGANGLNLLEAQHV+LVEPLLNPAAEAQAISRVHRIGQ  +TLVHRFIVK T
Sbjct: 2278 QVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQENRTLVHRFIVKDT 2337

Query: 523  VEESIYKLNKSKDSGSFISGNKKNQDQPVLTLKDVESLFKVAPSTVEQPKKEEPTSSLMH 702
            VEESIYKLN+S+++ SFISGN KNQDQP+LTLKD+E+LF   PS+V Q  +E+PT SLMH
Sbjct: 2338 VEESIYKLNRSRNTNSFISGNTKNQDQPLLTLKDLEALFTPVPSSVPQ-SEEKPTGSLMH 2396

Query: 703  LPPATAAGIAAERRLMEQ 756
            LPP+ AA IAAERRL +Q
Sbjct: 2397 LPPSVAAAIAAERRLKQQ 2414


>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
          Length = 1704

 Score =  324 bits (831), Expect = 2e-86
 Identities = 179/257 (69%), Positives = 199/257 (77%), Gaps = 6/257 (2%)
 Frame = +1

Query: 1    DDRQNKPPD-ASFHAFRS---SEASVIVNGSYSTKIAAVTRRILCIGSTNPKDKILVFSS 168
            DDRQ K  D A  H  +S   SEASVIV GSY TKI AVTRRIL I  T PK KILVFSS
Sbjct: 1434 DDRQTKSCDSAELHTVQSVEKSEASVIVQGSYGTKIEAVTRRILWIKCTEPKAKILVFSS 1493

Query: 169  WNDVLDVLEHAFTANDISFIRMKGGRKSHVAISQFXXXXXXXXXXXXXXXXQVEPNS--V 342
            WNDVL+VLEHA  AN+I+++RMKGGRKSHVAIS F                Q EP    V
Sbjct: 1494 WNDVLNVLEHALNANNITYVRMKGGRKSHVAISHFRRQRTSAEGNGQTHAQQPEPEPEFV 1553

Query: 343  QVMLLLIQHGANGLNLLEAQHVILVEPLLNPAAEAQAISRVHRIGQTKKTLVHRFIVKST 522
            QV+LLLIQHGANGLNLLEAQHV+LVEPLLNPAAEAQAISRVHRIGQ  +TLVHRFIVK T
Sbjct: 1554 QVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQENRTLVHRFIVKDT 1613

Query: 523  VEESIYKLNKSKDSGSFISGNKKNQDQPVLTLKDVESLFKVAPSTVEQPKKEEPTSSLMH 702
            VEESIYKLN+S+++ SFISGN KNQDQP+LTLKD+E+LF   PS+V Q  +E+PT SLMH
Sbjct: 1614 VEESIYKLNRSRNTNSFISGNTKNQDQPLLTLKDLEALFTPVPSSVPQ-SEEKPTGSLMH 1672

Query: 703  LPPATAAGIAAERRLME 753
            LPP+ AA IAAERRL E
Sbjct: 1673 LPPSVAAAIAAERRLKE 1689


>ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago truncatula]
            gi|355516770|gb|AES98393.1| ATP-dependent helicase,
            putative [Medicago truncatula]
          Length = 1764

 Score =  288 bits (738), Expect = 1e-75
 Identities = 158/238 (66%), Positives = 178/238 (74%), Gaps = 3/238 (1%)
 Frame = +1

Query: 55   EASVIVNGSYSTKIA-AVTRRILCIGSTNPKDKILVFSSWNDVLDVLEHAFTANDISFIR 231
            EAS+ V GSY TKI  AVTRRIL I +TN   K+LVFSSWNDVLDVLEHAF  N+I+F+R
Sbjct: 1531 EASITVEGSYGTKIIEAVTRRILWIKATNHNSKVLVFSSWNDVLDVLEHAFATNNITFVR 1590

Query: 232  MKGGRKSHVAISQFXXXXXXXXXXXXXXXXQVEPNSVQVMLLLIQHGANGLNLLEAQHVI 411
            MKGGRK+H AISQF                  EP S+QV+LLLIQHGANGLNLLEAQHV+
Sbjct: 1591 MKGGRKAHTAISQFRGIQNGTKGCEGE-----EPISIQVLLLLIQHGANGLNLLEAQHVV 1645

Query: 412  LVEPLLNPAAEAQAISRVHRIGQTKKTLVHRFIVKSTVEESIYKLNKSKDSGSFISGNKK 591
            LVEPLLNPAAEAQAISRVHRIGQ +KTL+HRF+VK TVEESIYKLN+S+ +  FISGN K
Sbjct: 1646 LVEPLLNPAAEAQAISRVHRIGQKQKTLIHRFLVKDTVEESIYKLNRSRSNHLFISGNTK 1705

Query: 592  NQDQPVLTLKDVESLFKVAPSTVEQ--PKKEEPTSSLMHLPPATAAGIAAERRLMEQR 759
            NQDQPVLTLKDVESL   AP T  +         ++L  LPP+ AA IAAERR  E R
Sbjct: 1706 NQDQPVLTLKDVESLLARAPITAPEIDENPNNTNTNLRDLPPSLAAAIAAERRYNEHR 1763


>ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Glycine max]
          Length = 1600

 Score =  284 bits (727), Expect = 2e-74
 Identities = 161/257 (62%), Positives = 186/257 (72%), Gaps = 5/257 (1%)
 Frame = +1

Query: 4    DRQNKPPDAS-FHAFRSSE---ASVIVNGSYSTKIAAVTRRILCIGSTNPKDKILVFSSW 171
            D Q++  D S  H   SSE   AS+ V GSY TKI AVTRRIL + + + + K+LVFSSW
Sbjct: 1355 DAQHESSDPSVLHPIDSSEKFEASISVKGSYGTKIEAVTRRILWVKANDHRAKVLVFSSW 1414

Query: 172  NDVLDVLEHAFTANDISFIRMKGGRKSHVAISQFXXXXXXXXXXXXXXXXQVEPNSVQVM 351
            NDVLDVLEHAF AN+I++IRMKGG       SQF                   P S+QV+
Sbjct: 1415 NDVLDVLEHAFAANNITYIRMKGG-------SQFRGKQNGTKKCEGST-----PKSIQVL 1462

Query: 352  LLLIQHGANGLNLLEAQHVILVEPLLNPAAEAQAISRVHRIGQTKKTLVHRFIVKSTVEE 531
            LLLIQHGANGLNLLEAQHV+LVEPLLNPAAEAQAISRVHRIGQ  KTL+HRFIVK TVEE
Sbjct: 1463 LLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFIVKDTVEE 1522

Query: 532  SIYKLNKSKDSGSFISGNKKNQDQPVLTLKDVESLFKVAPSTV-EQPKKEEPTSSLMHLP 708
            SIYKLN+S+ + SFISGN KNQDQPVLTLKDVE+L   AP T+ E  +     ++L HLP
Sbjct: 1523 SIYKLNRSRSNHSFISGNTKNQDQPVLTLKDVEALLSRAPLTMPESDENPNRDTNLRHLP 1582

Query: 709  PATAAGIAAERRLMEQR 759
            P+ AA +AAERRL EQR
Sbjct: 1583 PSVAAAVAAERRLNEQR 1599


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