BLASTX nr result

ID: Atractylodes21_contig00026038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026038
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526173.1| suppressor of ty, putative [Ricinus communis...   228   8e-58
ref|XP_004162900.1| PREDICTED: putative transcription elongation...   219   5e-55
ref|XP_004148818.1| PREDICTED: putative transcription elongation...   219   5e-55
ref|XP_002313759.1| global transcription factor group [Populus t...   214   2e-53
ref|XP_003523402.1| PREDICTED: putative transcription elongation...   210   2e-52

>ref|XP_002526173.1| suppressor of ty, putative [Ricinus communis]
            gi|223534550|gb|EEF36249.1| suppressor of ty, putative
            [Ricinus communis]
          Length = 1045

 Score =  228 bits (581), Expect = 8e-58
 Identities = 120/171 (70%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
 Frame = -3

Query: 659  TPRDXXXXXXXXXXXXXXSTPGGQPPMTPSSA-YLXXXXXXXXXXXXXXGLDIMSPVVGG 483
            TPRD              STPGGQP MTPSSA YL              GLD+MSPV+GG
Sbjct: 874  TPRDSSSAYANAPSPYLPSTPGGQP-MTPSSAAYLPGTPGGQPMTPGTGGLDVMSPVIGG 932

Query: 482  DNDGPWFLPDILVNVRRSGDDAVVGVIREVLLDGACRVALGASGNGDMITANPNEIEVVV 303
            DN+GPW++PDILVNVR++ DD+ +GVIR+VL DG+CRV LGA+GNG+ ITA PNEIE+VV
Sbjct: 933  DNEGPWYMPDILVNVRKAADDSAIGVIRDVLADGSCRVVLGANGNGETITALPNEIEIVV 992

Query: 302  PRKSDKIKIMGGAQRGATGKLIGVDGTDGIVKVDDTLDVKILDMVILAKLA 150
            PRKSDKIKIMGGA RGATGKLIGVDGTDGIVKVDDTLDVKILDMVILAKLA
Sbjct: 993  PRKSDKIKIMGGAHRGATGKLIGVDGTDGIVKVDDTLDVKILDMVILAKLA 1043


>ref|XP_004162900.1| PREDICTED: putative transcription elongation factor SPT5 homolog
            1-like, partial [Cucumis sativus]
          Length = 849

 Score =  219 bits (557), Expect = 5e-55
 Identities = 115/171 (67%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
 Frame = -3

Query: 659  TPRDXXXXXXXXXXXXXXSTPGGQPPMTPSSA-YLXXXXXXXXXXXXXXGLDIMSPVVGG 483
            TPRD              STPGGQP MTP+SA YL              GLD+MSPV+GG
Sbjct: 678  TPRDSGSAYANAPSPYLPSTPGGQP-MTPNSASYLPGTPGGQPMTPGTGGLDMMSPVIGG 736

Query: 482  DNDGPWFLPDILVNVRRSGDDAVVGVIREVLLDGACRVALGASGNGDMITANPNEIEVVV 303
            D +GPW++PDILVN RRSGDD ++GVIREVL DG+CR+ LG+SGNG+ +TA  +E+EV+V
Sbjct: 737  DTEGPWYMPDILVNYRRSGDDPIMGVIREVLPDGSCRIGLGSSGNGETVTAPSSEVEVIV 796

Query: 302  PRKSDKIKIMGGAQRGATGKLIGVDGTDGIVKVDDTLDVKILDMVILAKLA 150
            PRKSDKIKIMGGA RGATGKLIGVDGTDGIVKVDDTLDVKILD+VILAKLA
Sbjct: 797  PRKSDKIKIMGGALRGATGKLIGVDGTDGIVKVDDTLDVKILDLVILAKLA 847


>ref|XP_004148818.1| PREDICTED: putative transcription elongation factor SPT5 homolog
            1-like [Cucumis sativus]
          Length = 1044

 Score =  219 bits (557), Expect = 5e-55
 Identities = 115/171 (67%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
 Frame = -3

Query: 659  TPRDXXXXXXXXXXXXXXSTPGGQPPMTPSSA-YLXXXXXXXXXXXXXXGLDIMSPVVGG 483
            TPRD              STPGGQP MTP+SA YL              GLD+MSPV+GG
Sbjct: 873  TPRDSGSAYANAPSPYLPSTPGGQP-MTPNSASYLPGTPGGQPMTPGTGGLDMMSPVIGG 931

Query: 482  DNDGPWFLPDILVNVRRSGDDAVVGVIREVLLDGACRVALGASGNGDMITANPNEIEVVV 303
            D +GPW++PDILVN RRSGDD ++GVIREVL DG+CR+ LG+SGNG+ +TA  +E+EV+V
Sbjct: 932  DTEGPWYMPDILVNYRRSGDDPIMGVIREVLPDGSCRIGLGSSGNGETVTAPSSEVEVIV 991

Query: 302  PRKSDKIKIMGGAQRGATGKLIGVDGTDGIVKVDDTLDVKILDMVILAKLA 150
            PRKSDKIKIMGGA RGATGKLIGVDGTDGIVKVDDTLDVKILD+VILAKLA
Sbjct: 992  PRKSDKIKIMGGALRGATGKLIGVDGTDGIVKVDDTLDVKILDLVILAKLA 1042


>ref|XP_002313759.1| global transcription factor group [Populus trichocarpa]
            gi|222850167|gb|EEE87714.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1042

 Score =  214 bits (544), Expect = 2e-53
 Identities = 114/171 (66%), Positives = 130/171 (76%), Gaps = 1/171 (0%)
 Frame = -3

Query: 659  TPRDXXXXXXXXXXXXXXSTPGGQPPMTPSSA-YLXXXXXXXXXXXXXXGLDIMSPVVGG 483
            TPRD              STPGGQP MTPSSA YL              GLD+MSPV+GG
Sbjct: 871  TPRDSSSAYANAPSPYLPSTPGGQP-MTPSSASYLPGTPGGQLMTPGTNGLDMMSPVIGG 929

Query: 482  DNDGPWFLPDILVNVRRSGDDAVVGVIREVLLDGACRVALGASGNGDMITANPNEIEVVV 303
            D +GPWF+PDILV V R+ D++ VGVIREVL DG+C++ LGA GNG+ ITA P+EIE+VV
Sbjct: 930  DGEGPWFIPDILVTVHRTADESAVGVIREVLQDGSCKIVLGAHGNGETITALPSEIEMVV 989

Query: 302  PRKSDKIKIMGGAQRGATGKLIGVDGTDGIVKVDDTLDVKILDMVILAKLA 150
            PRKSDKIKI+GGA RGATGKLIGVDGTDGIVK++DTLDVKILDMVILAKLA
Sbjct: 990  PRKSDKIKILGGAHRGATGKLIGVDGTDGIVKLEDTLDVKILDMVILAKLA 1040


>ref|XP_003523402.1| PREDICTED: putative transcription elongation factor SPT5 homolog
            1-like [Glycine max]
          Length = 1050

 Score =  210 bits (534), Expect = 2e-52
 Identities = 113/152 (74%), Positives = 128/152 (84%), Gaps = 1/152 (0%)
 Frame = -3

Query: 602  TPGGQPPMTPSSA-YLXXXXXXXXXXXXXXGLDIMSPVVGGDNDGPWFLPDILVNVRRSG 426
            TPGGQP MTPSSA YL              G+D+MSPV+GG+N+GPWF+PDILVNV R+G
Sbjct: 899  TPGGQP-MTPSSASYLPGTPGGQPMTPGTGGMDMMSPVLGGENEGPWFIPDILVNVHRAG 957

Query: 425  DDAVVGVIREVLLDGACRVALGASGNGDMITANPNEIEVVVPRKSDKIKIMGGAQRGATG 246
            +++V GVIREVL DG+ RVALG+SGNG+ ITA PNE+E VVPRKSDKIKIMGGA RGATG
Sbjct: 958  EESV-GVIREVLPDGSYRVALGSSGNGEAITALPNEMEAVVPRKSDKIKIMGGALRGATG 1016

Query: 245  KLIGVDGTDGIVKVDDTLDVKILDMVILAKLA 150
            KLIGVDGTDGIVKVDDTLDVKILD+VILAKLA
Sbjct: 1017 KLIGVDGTDGIVKVDDTLDVKILDLVILAKLA 1048


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