BLASTX nr result

ID: Atractylodes21_contig00026021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026021
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72562.1| hypothetical protein VITISV_032210 [Vitis vinifera]   101   6e-20
gb|AAF79797.1|AC020646_20 T32E20.30 [Arabidopsis thaliana]             96   4e-18
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...    95   7e-18
dbj|BAG72154.1| hypothetical protein [Lotus japonicus]                 94   9e-18
dbj|BAG72151.1| hypothetical protein [Lotus japonicus]                 94   9e-18

>emb|CAN72562.1| hypothetical protein VITISV_032210 [Vitis vinifera]
          Length = 1003

 Score =  101 bits (252), Expect = 6e-20
 Identities = 53/103 (51%), Positives = 67/103 (65%), Gaps = 3/103 (2%)
 Frame = -1

Query: 300  GKVAYRLKLPPESSIHPVFHISQLKAAVGTHLTPTPLPRDLKDTGEVMTEPETLKAIR-- 127
            G VAYRL LPP S+IHP+FHISQL+ AVGT  T + LP  L    E++ EP T+  +R  
Sbjct: 697  GMVAYRLTLPPSSTIHPMFHISQLRKAVGTAPTSSSLPSQLTAEMELLVEPRTILGVRQC 756

Query: 126  -LGTHGELEVLLGWKGLQEYEDTWEKYSDICRQFPCFHLEDKV 1
              G+    EVL+ WK L ++E TWE ++ I  QFP FHL DKV
Sbjct: 757  LTGSTFVTEVLVQWKDLLDFEATWESFATIQNQFPEFHLVDKV 799


>gb|AAF79797.1|AC020646_20 T32E20.30 [Arabidopsis thaliana]
          Length = 1397

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/100 (49%), Positives = 60/100 (60%)
 Frame = -1

Query: 300  GKVAYRLKLPPESSIHPVFHISQLKAAVGTHLTPTPLPRDLKDTGEVMTEPETLKAIRLG 121
            GKVAYRLKLP  S IH VFH+SQLK  +G H    PLP  L    E +  PE +   R  
Sbjct: 1284 GKVAYRLKLPEGSKIHLVFHVSQLKQVLGDHHQVIPLPEVLTADNEFVVVPEAVLETRYN 1343

Query: 120  THGELEVLLGWKGLQEYEDTWEKYSDICRQFPCFHLEDKV 1
              G LE L+ W+GL  +EDTWE   D+ +QFP   L+DK+
Sbjct: 1344 EDGLLEALVHWQGLPVHEDTWEIAKDLKKQFPGLALQDKL 1383


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 52/101 (51%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
 Frame = -1

Query: 300  GKVAYRLKLPPESSIHPVFHISQLKAAVGTHLTPTPLPRDLKDTGEVMTEPETLKAIR-L 124
            G+VAY+L+LP  S+IHPVFH+SQLK AV    TP  LP+ L  T E  T PE L  IR  
Sbjct: 1518 GQVAYKLQLPEHSTIHPVFHVSQLKRAVPPSFTPQELPKILSPTLEWNTGPEKLLDIRQS 1577

Query: 123  GTHGELEVLLGWKGLQEYEDTWEKYSDICRQFPCFHLEDKV 1
             T+   EVL+ W GL   E TWE    + +Q+P F LEDKV
Sbjct: 1578 NTNSGPEVLVQWSGLSTLESTWEPLLTLVQQYPDFDLEDKV 1618


>dbj|BAG72154.1| hypothetical protein [Lotus japonicus]
          Length = 1558

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 46/97 (47%), Positives = 60/97 (61%)
 Frame = -1

Query: 291  AYRLKLPPESSIHPVFHISQLKAAVGTHLTPTPLPRDLKDTGEVMTEPETLKAIRLGTHG 112
            AY+L+LP  S +HPVFHIS LK AV   +   PLP  L +  E+  EPE +   R    G
Sbjct: 1426 AYKLQLPEGSQVHPVFHISLLKKAVNAGVQSQPLPAALTEEWELKVEPEAIMDTRENRDG 1485

Query: 111  ELEVLLGWKGLQEYEDTWEKYSDICRQFPCFHLEDKV 1
            +LEVL+ WK L  +ED+WE +S +  QFP   LEDK+
Sbjct: 1486 DLEVLIRWKDLPTFEDSWEDFSKLLDQFPNHQLEDKL 1522


>dbj|BAG72151.1| hypothetical protein [Lotus japonicus]
          Length = 1558

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 46/97 (47%), Positives = 60/97 (61%)
 Frame = -1

Query: 291  AYRLKLPPESSIHPVFHISQLKAAVGTHLTPTPLPRDLKDTGEVMTEPETLKAIRLGTHG 112
            AY+L+LP  S +HPVFHIS LK AV   +   PLP  L +  E+  EPE +   R    G
Sbjct: 1426 AYKLQLPEGSQVHPVFHISLLKKAVNAGVQSQPLPAALTEEWELKVEPEAIMDTRENRDG 1485

Query: 111  ELEVLLGWKGLQEYEDTWEKYSDICRQFPCFHLEDKV 1
            +LEVL+ WK L  +ED+WE +S +  QFP   LEDK+
Sbjct: 1486 DLEVLIRWKDLPTFEDSWEDFSKLLDQFPNHQLEDKL 1522


Top