BLASTX nr result

ID: Atractylodes21_contig00025952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025952
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX95767.2| hypothetical protein LES1_20t00018 [Solanum lycop...    72   5e-11
ref|XP_002321554.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
emb|CAN77682.1| hypothetical protein VITISV_040764 [Vitis vinifera]    57   1e-06

>gb|AAX95767.2| hypothetical protein LES1_20t00018 [Solanum lycopersicum]
          Length = 119

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/79 (44%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
 Frame = +2

Query: 20  KSRSKKSICERSMKLMTNLVKVSYISISHIGLRTGAPPQPPS---STHNPTSSLSRYPRN 190
           KSRS  S+CE+SMK++TN++++S  SI+ + L     P P     +T    S  +++P +
Sbjct: 4   KSRSNDSLCEKSMKMVTNVIRLSSFSIARMSLGIATEPSPGGKIPATFIKGSPTAQFPES 63

Query: 191 LRSQEPINSKKPVSYLIHP 247
           LRSQ+P+N KKPV+YLI P
Sbjct: 64  LRSQKPVNVKKPVAYLIEP 82


>ref|XP_002321554.1| predicted protein [Populus trichocarpa] gi|222868550|gb|EEF05681.1|
           predicted protein [Populus trichocarpa]
          Length = 145

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 8/104 (7%)
 Frame = +2

Query: 17  TKSRSKKSICERSMKLMTNLVKVSYISISHIGLRTGAPPQPPSSTHNPTSS--------L 172
           +K  +  S+CE+SMK++ N++K+S  SI+ + L T +PP    S  + T S        L
Sbjct: 3   SKHGNDNSLCEKSMKMVVNIIKLSSFSIAKMSLGTPSPPVATKSLAHVTGSVVVAKEPLL 62

Query: 173 SRYPRNLRSQEPINSKKPVSYLIHPGDATRSSLSMIKDEESTVD 304
           S+ P + RSQEP  S KP S+++ P +   SS  +I ++ S ++
Sbjct: 63  SQIPGSRRSQEPQGSSKPKSFVMQPDEGNGSS-HVIHEDNSVIN 105


>emb|CAN77682.1| hypothetical protein VITISV_040764 [Vitis vinifera]
          Length = 134

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
 Frame = +2

Query: 11  NSTKSRSKKSICERSMKLMTNLVKVSYISISHIGLRTGAPPQPPSSTHNPTSSLS----- 175
           N+ +S S +S+CE+S+ +  N++K+S  SI+ + L  G  P  P ++ + T+  +     
Sbjct: 3   NNARSNSYQSLCEKSILVAANMIKLSSFSIAKMSLGIGGTPASPRNSASSTAPNTVTNDH 62

Query: 176 -RYPRNLRSQEPINSKKPVSYLIHPGDATRSSLSMIKDEESTVD 304
               R+ RS  P  S KP++YLI P +   S  S +  EE  VD
Sbjct: 63  LHXGRSSRSXVPERSSKPITYLIEPNEGAGS--SYVIQEEKGVD 104


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