BLASTX nr result

ID: Atractylodes21_contig00025946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025946
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326884.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
emb|CAN83231.1| hypothetical protein VITISV_018480 [Vitis vinifera]    95   6e-18
ref|XP_002881966.1| protein binding protein [Arabidopsis lyrata ...    86   5e-15
ref|XP_002878320.1| hypothetical protein ARALYDRAFT_486484 [Arab...    84   1e-14
ref|NP_001030907.1| protein binding / zinc ion binding protein [...    83   3e-14

>ref|XP_002326884.1| predicted protein [Populus trichocarpa] gi|222835199|gb|EEE73634.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 47/139 (33%), Positives = 78/139 (56%), Gaps = 7/139 (5%)
 Frame = +3

Query: 42  MEEEQIEVIIAKLSTTAVLILTNKFNILITVVAVHILRRILKTIHHRHQFPIFT------ 203
           M ++++E+++ K+++  +    N  N ++ +  +  +R   + +  ++  P FT      
Sbjct: 1   MMKDEMELVMRKVAS-CIAATANCKNTIVIIAIIFAIRLCTEVLWRKNHIPSFTFRQKHH 59

Query: 204 -AKPTATKTVYCAVCLHDVDGGQRYRRLPQCRHCFHVNCIDTWLQSRSTCPLCRNQIPPH 380
             K    +T YC VCLH+V  G+R R+L +C+HCFHV CID W QS STCPLCRNQ+   
Sbjct: 60  PIKNDDYETPYCVVCLHEVVDGERLRKLLKCKHCFHVACIDAWFQSHSTCPLCRNQVLLR 119

Query: 381 LLPQKQQKEPGFLYMFIYF 437
              Q Q ++    + F+ F
Sbjct: 120 HDHQHQNEKRCLFFHFLSF 138


>emb|CAN83231.1| hypothetical protein VITISV_018480 [Vitis vinifera]
          Length = 357

 Score = 95.1 bits (235), Expect = 6e-18
 Identities = 47/113 (41%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
 Frame = +3

Query: 66  IIAKLSTTAVLILTNKFNILITVVAVHILRRILKTIHHRHQFPIFTAKPTATKT-VYCAV 242
           +++ +++     LT    I IT+   +  R++LK  H      +F  KP  T   +YC V
Sbjct: 12  VVSTVASAVTTHLTLVIAITITITFGYYRRKVLKRDH------VFCYKPNRTHXZIYCVV 65

Query: 243 CLHDVDGGQRYRRLPQCRHCFHVNCIDTWLQSRSTCPLCRNQIPPHLLPQKQQ 401
           CL D   G+R RRLP C+HCFHV CID W Q+ STCPLCR+Q+    LP ++Q
Sbjct: 66  CLCDAVEGERLRRLPDCKHCFHVGCIDAWFQAHSTCPLCRSQVS---LPHRRQ 115


>ref|XP_002881966.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327805|gb|EFH58225.1| protein binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 145

 Score = 85.5 bits (210), Expect = 5e-15
 Identities = 34/70 (48%), Positives = 47/70 (67%)
 Frame = +3

Query: 168 TIHHRHQFPIFTAKPTATKTVYCAVCLHDVDGGQRYRRLPQCRHCFHVNCIDTWLQSRST 347
           T+HHR ++   TA+   +   YC +CL D   G++ RR+  C HCFH +CID WL+ +ST
Sbjct: 49  TVHHRRRWRKTTAEEKHSSP-YCTICLEDAAEGEKMRRITTCNHCFHADCIDPWLEKKST 107

Query: 348 CPLCRNQIPP 377
           CPLCR +IPP
Sbjct: 108 CPLCRAEIPP 117


>ref|XP_002878320.1| hypothetical protein ARALYDRAFT_486484 [Arabidopsis lyrata subsp.
           lyrata] gi|297324158|gb|EFH54579.1| hypothetical protein
           ARALYDRAFT_486484 [Arabidopsis lyrata subsp. lyrata]
          Length = 139

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 48/114 (42%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
 Frame = +3

Query: 117 NILITVVAVHILRR---ILKTIHHRHQFPIF----TAKPTATKTVYCAVCLHDVDGGQRY 275
           ++L+T VAV  LR    I+     RH+   F    TA    +   +CAVCL + + G++ 
Sbjct: 16  SVLVTSVAVFSLRFATFIVTRPWRRHRTFTFRRWITAANDHSSPPFCAVCLQEAEEGEKM 75

Query: 276 RRLPQCRHCFHVNCIDTWLQSRSTCPLCRNQIPPHLLPQKQQKEPGFLYMFIYF 437
           +RL  CRHCFH +CIDTWL   S CPLCR QIPP  LP      P    +F++F
Sbjct: 76  KRLTICRHCFHADCIDTWLSEMSKCPLCRAQIPP--LP------PASPLLFLFF 121


>ref|NP_001030907.1| protein binding / zinc ion binding protein [Arabidopsis thaliana]
           gi|98962061|gb|ABF59360.1| unknown protein [Arabidopsis
           thaliana] gi|332646611|gb|AEE80132.1| protein binding /
           zinc ion binding protein [Arabidopsis thaliana]
          Length = 139

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 44/94 (46%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
 Frame = +3

Query: 117 NILITVVAVHILR---RILKTIHHRHQFPIF----TAKPTATKTVYCAVCLHDVDGGQRY 275
           +ILIT VAV   R    I+ +   RH+   F     A+   +   +CAVCL + + G++ 
Sbjct: 16  SILITSVAVFSERFATLIVTSPWRRHRTFTFRRWRAAENDDSSPPFCAVCLQEAEEGEKM 75

Query: 276 RRLPQCRHCFHVNCIDTWLQSRSTCPLCRNQIPP 377
           RRL  CRHCFH +CIDTWL   S CPLCR QIPP
Sbjct: 76  RRLTICRHCFHADCIDTWLSEMSKCPLCRAQIPP 109


Top