BLASTX nr result

ID: Atractylodes21_contig00025930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025930
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    86   2e-15
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    82   6e-14
ref|XP_004172732.1| PREDICTED: uncharacterized protein LOC101232...    60   1e-07
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...    58   7e-07
ref|XP_004153884.1| PREDICTED: enzymatic polyprotein-like, parti...    57   2e-06

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 8/99 (8%)
 Frame = -1

Query: 273 MGIQWLEKLGAVTTNWRTRHMTFRVNGATITLKGDLSLDRARVTLKTMWKTIVKEGGGYM 94
           +G+QWLE LG V +NW+T+ M+F++ G   TL GD +L R++V+LK M +T+ KEGGG  
Sbjct: 570 LGVQWLETLGTVVSNWKTQKMSFQLGGVPYTLTGDPTLARSKVSLKAMLRTLRKEGGGLW 629

Query: 93  IQFNQVEG--------QKVEGVSHTRYQTLLQRYQGVFD 1
           ++ NQVE          KVE       Q L++R++GVF+
Sbjct: 630 LECNQVEAGGAGSIRDSKVEQEIPPFLQELMRRFEGVFE 668


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 39/97 (40%), Positives = 62/97 (63%), Gaps = 6/97 (6%)
 Frame = -1

Query: 273 MGIQWLEKLGAVTTNWRTRHMTFRVNGATITLKGDLSLDRARVTLKTMWKTIVKEGGGYM 94
           +G+QWLEKLG + TNW+T+ + ++    T+TL+G+ +L R  V+LK M++T+ KEGGG++
Sbjct: 506 LGVQWLEKLGTMVTNWKTQTLQYKEGNETVTLRGNPALSRTEVSLKAMYRTLRKEGGGFL 565

Query: 93  IQFNQVEGQKVEGVSH------TRYQTLLQRYQGVFD 1
           +  NQ+     EG+        +  Q LL  YQ VF+
Sbjct: 566 VDLNQMASH--EGLPRELPEVPSCLQPLLSSYQQVFN 600


>ref|XP_004172732.1| PREDICTED: uncharacterized protein LOC101232451 [Cucumis sativus]
          Length = 392

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
 Frame = -1

Query: 273 MGIQWLEKLGAVTTNWRTRHMTFRVNGATITLKGDLSLDRARVTLKTMWKTIVKEGGGYM 94
           + +QWL  LG    NWR   MTF+  G  + ++GD SL +  V+LK+M K+   E  GY 
Sbjct: 140 LDMQWLHSLGVTEFNWRKLVMTFQHEGKKVVIRGDPSLTKMMVSLKSMMKSWNVEDQGYR 199

Query: 93  IQFNQVEGQ-KVEGV------SHTRYQTLLQRYQGVFD 1
           ++   +EG+  VEG+      +     TLL R+  VF+
Sbjct: 200 VECRAMEGRLSVEGLYSEEETTTVDTTTLLSRFSDVFE 237


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/73 (38%), Positives = 41/73 (56%)
 Frame = -1

Query: 273 MGIQWLEKLGAVTTNWRTRHMTFRVNGATITLKGDLSLDRARVTLKTMWKTIVKEGGGYM 94
           +G+QWL K GA+T +WR   MTF V    + L+GDLSL R  ++LK + K    E  G++
Sbjct: 456 LGMQWLPKQGAMTVDWRNLAMTFAVRDVKVMLRGDLSLTRMAISLKMLMKQWQPEDRGFL 515

Query: 93  IQFNQVEGQKVEG 55
                 +  + EG
Sbjct: 516 SLLQSSDTSQKEG 528


>ref|XP_004153884.1| PREDICTED: enzymatic polyprotein-like, partial [Cucumis sativus]
          Length = 564

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
 Frame = -1

Query: 273 MGIQWLEKLGAVTTNWRTRHMTFRVNGATITLKGDLSLDRARVTLKTMWKTIVKEGGGYM 94
           +G+QWL   G +  +W +  MTFR+      LKGD SL RA  +LKT+ KT  ++  G++
Sbjct: 320 LGMQWLNTTGTMKIHWPSLTMTFRMGKKQFILKGDPSLIRAECSLKTIEKTWEEDDQGFL 379

Query: 93  IQFNQVEG---------QKVEG--VSHTRYQTLLQRYQGVFD 1
           ++    E          Q+V+G        Q LLQ+Y  +F+
Sbjct: 380 LEMQNYEAEEDGELDEVQRVKGDEEESPMIQVLLQQYTDLFE 421


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