BLASTX nr result
ID: Atractylodes21_contig00025907
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00025907
(1494 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containi... 817 0.0
ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containi... 801 0.0
ref|NP_198814.1| pentatricopeptide repeat-containing protein [Ar... 788 0.0
ref|XP_002870737.1| pentatricopeptide repeat-containing protein ... 784 0.0
ref|XP_002517447.1| pentatricopeptide repeat-containing protein,... 763 0.0
>ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Vitis vinifera]
gi|296087770|emb|CBI35026.3| unnamed protein product
[Vitis vinifera]
Length = 675
Score = 817 bits (2111), Expect = 0.0
Identities = 409/496 (82%), Positives = 451/496 (90%)
Frame = -2
Query: 1493 KKLRHRSIFVVISCSSTKDIWRKTPKSTTLRPSSFLQPYRRKPEVGYLDHSIDMDELVSS 1314
K +HR+ F+++S KD+WR+ P TT SS Q RK V +LDHS+DMDEL++S
Sbjct: 41 KTQKHRACFILVSVF--KDVWRRLPDETTSLLSSSRQHRPRKQRVVHLDHSVDMDELLAS 98
Query: 1313 INQTTNEQELFALLSPYKSRQLSIRFMVTVLSRETDWQRSLALLDWINEQALYTPSVYAY 1134
I+QT+NEQEL++L+SPYK RQLSIRFMV++LSRE DWQRSLALLDWINE+A Y+PSV+AY
Sbjct: 99 ISQTSNEQELYSLMSPYKGRQLSIRFMVSLLSREPDWQRSLALLDWINEEASYSPSVFAY 158
Query: 1133 NVVLRNVLRAKQWEIAYGLFDEMRQRALSPDRYTYSTLITQFGKEGKFDDALSWLQKMEH 954
NVV+RNVLRAKQWE+A+GLF+EMRQRAL+PDRYTYSTLIT FGKEG FD ALSWLQKME
Sbjct: 159 NVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLITHFGKEGMFDSALSWLQKMEQ 218
Query: 953 DHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKQSGICPDLVAYNSMINVFGKAKLFRE 774
D VSGDLVLYSNLIELSRKLCDYSKAISIFSRLK+SGI PDLVAYNSMINVFGKAKLFRE
Sbjct: 219 DRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMINVFGKAKLFRE 278
Query: 773 ARVLLQEMRSVGVKPDTVSYSTLLSMYAENQKYLEALSVFSEMKELNCLPDLTTCNIMID 594
AR+LL EMR+ GV PDTVSYSTLLSMY EN KY+EALSVFSEM E+ C DLTTCN+MID
Sbjct: 279 ARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDLTTCNVMID 338
Query: 593 VYGQLDMAKEADRLFWSMSKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIDQ 414
VYGQLDMAKEADRLFWSM KMGIEP +VSYNTLLRVYGEAELFGEAIHLFRLMQRKDI+Q
Sbjct: 339 VYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQ 398
Query: 413 NVVTYNTMIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWDKAGKLDRAAMLF 234
NVVTYNTMIKIYGK+LEHEKA NL+QEMQ+RGIEPNAITYSTIISIWDKAGKLDRAAMLF
Sbjct: 399 NVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLF 458
Query: 233 QKLRSSGVEVDQVLYQTMIVAYERAGLVGHAKRLLHELKHPDNIPRATAITILAGAGRIE 54
QKLRSSG+E+DQVLYQTMIVAYERAGLV HAKRLLHELK PDNIPR TAITILAGAGRIE
Sbjct: 459 QKLRSSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAGAGRIE 518
Query: 53 EATWVFRQAYNAGEIK 6
EATWVFRQA++AGE+K
Sbjct: 519 EATWVFRQAFDAGEVK 534
Score = 117 bits (293), Expect = 8e-24
Identities = 94/436 (21%), Positives = 194/436 (44%), Gaps = 67/436 (15%)
Frame = -2
Query: 1223 LSRET-DWQRSLALLDWINEQALYTPSVYAYNVVLRNVLRAKQWEIAYGLFDEMRQRALS 1047
LSR+ D+ +++++ + + +P + AYN ++ +AK + A L EMR +
Sbjct: 234 LSRKLCDYSKAISIFSRLKRSGI-SPDLVAYNSMINVFGKAKLFREARLLLPEMRAGGVM 292
Query: 1046 PDRYTYSTLITQFGKEGKFDDALSWLQKMEHDHVSGDLVLYSNLIELSRKLCDYSKAISI 867
PD +YSTL++ + + GK+ +ALS +M DL + +I++ +L +A +
Sbjct: 293 PDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDLTTCNVMIDVYGQLDMAKEADRL 352
Query: 866 FSRLKQSGICPDLVAYNSMINVFGKAKLFREARVLLQEMRSVGVKPDTVSYSTLLSMYAE 687
F +++ GI P +V+YN+++ V+G+A+LF EA L + M+ ++ + V+Y+T++ +Y +
Sbjct: 353 FWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 412
Query: 686 NQKYLEALSVFSEMKELNCLPDLTTCNIMIDVYGQLDMAKEADRLFWSMSKMGIE----- 522
+ ++ +A ++ EM+ P+ T + +I ++ + A LF + GIE
Sbjct: 413 SLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGIEIDQVL 472
Query: 521 --------------------------PNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDI 420
P+ + T + + A EA +FR
Sbjct: 473 YQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAGAGRIEEATWVFRQAFDAGE 532
Query: 419 DQNVVTYNTMIKIY-----------------------------------GKTLEHEKANN 345
+++ + MI ++ GK E EKA+
Sbjct: 533 VKDITVFGCMIDLFSRNRKHTNVIEVFDKMRGAGYFPDSNVIALVLNACGKLREFEKADA 592
Query: 344 LIQEMQSRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGVEVDQVLYQTMIVAYE 165
+ +EM+ G + + ++S++ G LF++L S + L+ + YE
Sbjct: 593 IYKEMEEEGCVFSDEVHFQMLSLYGARGDFQMVDSLFERLDSDPNINKKELHLVVASIYE 652
Query: 164 RAGLVGHAKRLLHELK 117
RA + A ++++ ++
Sbjct: 653 RANRLNDASQIMNRMR 668
Score = 98.6 bits (244), Expect = 4e-18
Identities = 74/334 (22%), Positives = 148/334 (44%), Gaps = 34/334 (10%)
Frame = -2
Query: 1214 ETDWQRSLALLDWINEQALYTPSVYAYNVVLRNVLRAKQWEIAYGLFDEMRQRALSPDRY 1035
+ D + L W + P + +YN +LR A+ + A LF M+++ + +
Sbjct: 342 QLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVV 401
Query: 1034 TYSTLITQFGKEGKFDDALSWLQKMEHDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRL 855
TY+T+I +GK + + A + +Q+M++ + + + YS +I + K +A +F +L
Sbjct: 402 TYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKL 461
Query: 854 KQSGICPDLVAYNSMINVFGKAKLFREARVLLQEMR------------------------ 747
+ SGI D V Y +MI + +A L A+ LL E++
Sbjct: 462 RSSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAGAGRIEEAT 521
Query: 746 -------SVGVKPDTVSYSTLLSMYAENQKYLEALSVFSEMKELNCLPDLTTCNIMIDVY 588
G D + ++ +++ N+K+ + VF +M+ PD ++++
Sbjct: 522 WVFRQAFDAGEVKDITVFGCMIDLFSRNRKHTNVIEVFDKMRGAGYFPDSNVIALVLNAC 581
Query: 587 GQLDMAKEADRLFWSMSKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIDQNV 408
G+L ++AD ++ M + G + + +L +YG G+ + L +R D D N+
Sbjct: 582 GKLREFEKADAIYKEMEEEGCVFSDEVHFQMLSLYGAR---GDFQMVDSLFERLDSDPNI 638
Query: 407 ---VTYNTMIKIYGKTLEHEKANNLIQEMQSRGI 315
+ + IY + A+ ++ M+ RGI
Sbjct: 639 NKKELHLVVASIYERANRLNDASQIMNRMRERGI 672
>ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
gi|449530101|ref|XP_004172035.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
Length = 680
Score = 801 bits (2068), Expect = 0.0
Identities = 403/493 (81%), Positives = 446/493 (90%), Gaps = 4/493 (0%)
Frame = -2
Query: 1472 IFVVISCSSTKDIWRK-TPK---STTLRPSSFLQPYRRKPEVGYLDHSIDMDELVSSINQ 1305
IF S S++KDIWR+ TP +TTL P + + RR E +LDHSIDMDEL++SI Q
Sbjct: 46 IFTASSSSTSKDIWRRQTPSEKSTTTLLPQKYQRSGRRPRESSHLDHSIDMDELLASIGQ 105
Query: 1304 TTNEQELFALLSPYKSRQLSIRFMVTVLSRETDWQRSLALLDWINEQALYTPSVYAYNVV 1125
T NEQEL+++LSPYK R+LS+RFMV++LSRE+DWQRSLA+LDWINE+ALYTPSVYAYNVV
Sbjct: 106 TKNEQELYSVLSPYKGRELSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVV 165
Query: 1124 LRNVLRAKQWEIAYGLFDEMRQRALSPDRYTYSTLITQFGKEGKFDDALSWLQKMEHDHV 945
LRNVLRAKQWE+A+GLFDEMRQRAL+ DRYTYSTLIT FGKEG FD ALSWLQKME D V
Sbjct: 166 LRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRV 225
Query: 944 SGDLVLYSNLIELSRKLCDYSKAISIFSRLKQSGICPDLVAYNSMINVFGKAKLFREARV 765
SGDLVLYSNLIELSRKLCDYSKAISIFSRLK+SGI PD+VAYN+MINVFGKAKLFREAR
Sbjct: 226 SGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARF 285
Query: 764 LLQEMRSVGVKPDTVSYSTLLSMYAENQKYLEALSVFSEMKELNCLPDLTTCNIMIDVYG 585
LL+EMR+V V PDTVSYSTLL+M+ EN+K+LEALSV SEMKE+NC DLTTCNIMIDVYG
Sbjct: 286 LLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYG 345
Query: 584 QLDMAKEADRLFWSMSKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIDQNVV 405
QLDM KEADRLFW M K+GIEPNVVSYNT+LRVYGEAELFGEAIHLFRLMQRK+I QNVV
Sbjct: 346 QLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVV 405
Query: 404 TYNTMIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKL 225
TYNTMIKIYGKTLEHEKA NL+Q+MQ RGIEPNAITYSTIISIW KAGKLDR+AMLFQKL
Sbjct: 406 TYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKL 465
Query: 224 RSSGVEVDQVLYQTMIVAYERAGLVGHAKRLLHELKHPDNIPRATAITILAGAGRIEEAT 45
RSSG E+DQVLYQTMIVAYE+AGLVGHAKRLLHELK PDNIPR TAITILA AGRIEEAT
Sbjct: 466 RSSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELKQPDNIPRTTAITILAKAGRIEEAT 525
Query: 44 WVFRQAYNAGEIK 6
WVFRQA++AGE+K
Sbjct: 526 WVFRQAFDAGELK 538
Score = 118 bits (295), Expect = 5e-24
Identities = 99/435 (22%), Positives = 193/435 (44%), Gaps = 67/435 (15%)
Frame = -2
Query: 1223 LSRET-DWQRSLALLDWINEQALYTPSVYAYNVVLRNVLRAKQWEIAYGLFDEMRQRALS 1047
LSR+ D+ +++++ + + TP + AYN ++ +AK + A L EMR +
Sbjct: 238 LSRKLCDYSKAISIFSRLKRSGI-TPDIVAYNTMINVFGKAKLFREARFLLKEMRAVDVM 296
Query: 1046 PDRYTYSTLITQFGKEGKFDDALSWLQKMEHDHVSGDLVLYSNLIELSRKLCDYSKAISI 867
PD +YSTL+ F + KF +ALS + +M+ + DL + +I++ +L +A +
Sbjct: 297 PDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRL 356
Query: 866 FSRLKQSGICPDLVAYNSMINVFGKAKLFREARVLLQEMRSVGVKPDTVSYSTLLSMYAE 687
F R+++ GI P++V+YN+++ V+G+A+LF EA L + M+ +K + V+Y+T++ +Y +
Sbjct: 357 FWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGK 416
Query: 686 NQKYLEALSVFSEMKELNCLPDLTTCNIMIDVYGQLDMAKEADRLFWSMSKMGIEPNVVS 507
++ +A ++ +M++ P+ T + +I ++G+ + LF + G E + V
Sbjct: 417 TLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVL 476
Query: 506 YN-------------------------------TLLRVYGEAELFGEAIHLFR------- 441
Y T + + +A EA +FR
Sbjct: 477 YQTMIVAYEKAGLVGHAKRLLHELKQPDNIPRTTAITILAKAGRIEEATWVFRQAFDAGE 536
Query: 440 ------------LMQRKDIDQNVV----------------TYNTMIKIYGKTLEHEKANN 345
L R +NV+ ++ YGK + + A+
Sbjct: 537 LKDISVFECMIDLFSRNKKHKNVLEVFEKMRNVGHFPNSDVIALVLNAYGKLRDFDTADA 596
Query: 344 LIQEMQSRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGVEVDQVLYQTMIVAYE 165
L EMQ G + ++S++ R LF++L S + L+ + YE
Sbjct: 597 LYMEMQEEGCVFTDEVHFQMLSLYGARNDYKRLESLFERLDSDPNINKKELHLVVASIYE 656
Query: 164 RAGLVGHAKRLLHEL 120
R A R+++ +
Sbjct: 657 RGNRSKDASRIINRM 671
Score = 110 bits (275), Expect = 1e-21
Identities = 90/408 (22%), Positives = 182/408 (44%), Gaps = 5/408 (1%)
Frame = -2
Query: 1418 KSTTLRPSSFLQPYRRKPEVGYLDHSIDMDELVSSINQTTNEQELFALLSPYKSRQLSI- 1242
K+ R + FL R +V + ++ L++ + E +++S K +
Sbjct: 276 KAKLFREARFLLKEMRAVDV--MPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLD 333
Query: 1241 ----RFMVTVLSRETDWQRSLALLDWINEQALYTPSVYAYNVVLRNVLRAKQWEIAYGLF 1074
M+ V + D + L W + P+V +YN +LR A+ + A LF
Sbjct: 334 LTTCNIMIDVYG-QLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLF 392
Query: 1073 DEMRQRALSPDRYTYSTLITQFGKEGKFDDALSWLQKMEHDHVSGDLVLYSNLIELSRKL 894
M+++ + + TY+T+I +GK + + A + +Q M+ + + + YS +I + K
Sbjct: 393 RLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKA 452
Query: 893 CDYSKAISIFSRLKQSGICPDLVAYNSMINVFGKAKLFREARVLLQEMRSVGVKPDTVSY 714
++ +F +L+ SG D V Y +MI + KA L A+ LL E++ +PD +
Sbjct: 453 GKLDRSAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELK----QPDNIPR 508
Query: 713 STLLSMYAENQKYLEALSVFSEMKELNCLPDLTTCNIMIDVYGQLDMAKEADRLFWSMSK 534
+T +++ A+ + EA VF + + L D++ MID++ + K +F M
Sbjct: 509 TTAITILAKAGRIEEATWVFRQAFDAGELKDISVFECMIDLFSRNKKHKNVLEVFEKMRN 568
Query: 533 MGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIDQNVVTYNTMIKIYGKTLEHEK 354
+G PN +L YG+ F A L+ MQ + + M+ +YG ++++
Sbjct: 569 VGHFPNSDVIALVLNAYGKLRDFDTADALYMEMQEEGCVFTDEVHFQMLSLYGARNDYKR 628
Query: 353 ANNLIQEMQSRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGV 210
+L + + S + + SI+++ + A+ + ++ +
Sbjct: 629 LESLFERLDSDPNINKKELHLVVASIYERGNRSKDASRIINRMNKIAI 676
>ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g39980, chloroplastic; Flags: Precursor
gi|10176990|dbj|BAB10222.1| unnamed protein product
[Arabidopsis thaliana] gi|332007115|gb|AED94498.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 678
Score = 788 bits (2034), Expect = 0.0
Identities = 394/499 (78%), Positives = 441/499 (88%), Gaps = 6/499 (1%)
Frame = -2
Query: 1484 RHRSIFVVISCSST------KDIWRKTPKSTTLRPSSFLQPYRRKPEVGYLDHSIDMDEL 1323
R R++ +S SS+ K +WRK P+ T L+ +RR +LDH++DMDEL
Sbjct: 36 RQRNLIFTVSASSSSESTQNKKVWRKQPEKNTTSSFQALRKHRRYQRSAFLDHNVDMDEL 95
Query: 1322 VSSINQTTNEQELFALLSPYKSRQLSIRFMVTVLSRETDWQRSLALLDWINEQALYTPSV 1143
++SI+QT NE+ELF+LLS YK RQLSIRFMV++LSRE DWQRSLALLDW++E+A YTPSV
Sbjct: 96 LASIHQTQNEKELFSLLSTYKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSV 155
Query: 1142 YAYNVVLRNVLRAKQWEIAYGLFDEMRQRALSPDRYTYSTLITQFGKEGKFDDALSWLQK 963
+AYNVVLRNVLRAKQ++IA+GLFDEMRQRAL+PDRYTYSTLIT FGKEG FD ALSWLQK
Sbjct: 156 FAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQK 215
Query: 962 MEHDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKQSGICPDLVAYNSMINVFGKAKL 783
ME D VSGDLVLYSNLIELSR+LCDYSKAISIFSRLK+SGI PDLVAYNSMINV+GKAKL
Sbjct: 216 MEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKL 275
Query: 782 FREARVLLQEMRSVGVKPDTVSYSTLLSMYAENQKYLEALSVFSEMKELNCLPDLTTCNI 603
FREAR+L++EM GV P+TVSYSTLLS+Y EN K+LEALSVF+EMKE+NC DLTTCNI
Sbjct: 276 FREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNI 335
Query: 602 MIDVYGQLDMAKEADRLFWSMSKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKD 423
MIDVYGQLDM KEADRLFWS+ KM IEPNVVSYNT+LRVYGEAELFGEAIHLFRLMQRKD
Sbjct: 336 MIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKD 395
Query: 422 IDQNVVTYNTMIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWDKAGKLDRAA 243
I+QNVVTYNTMIKIYGKT+EHEKA NL+QEMQSRGIEPNAITYSTIISIW KAGKLDRAA
Sbjct: 396 IEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAA 455
Query: 242 MLFQKLRSSGVEVDQVLYQTMIVAYERAGLVGHAKRLLHELKHPDNIPRATAITILAGAG 63
LFQKLRSSGVE+DQVLYQTMIVAYER GL+GHAKRLLHELK PDNIPR TAITILA AG
Sbjct: 456 TLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAG 515
Query: 62 RIEEATWVFRQAYNAGEIK 6
R EEATWVFRQA+ +GE+K
Sbjct: 516 RTEEATWVFRQAFESGEVK 534
Score = 124 bits (310), Expect = 8e-26
Identities = 79/324 (24%), Positives = 161/324 (49%), Gaps = 3/324 (0%)
Frame = -2
Query: 1079 LFDEMRQRALSPDRYTYSTLITQFGKEGKFDDALSWLQKMEHDHVSGDLVLYSNLIELSR 900
LF +R+ + P+ +Y+T++ +G+ F +A+ + M+ + ++V Y+ +I++
Sbjct: 352 LFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 411
Query: 899 KLCDYSKAISIFSRLKQSGICPDLVAYNSMINVFGKAKLFREARVLLQEMRSVGVKPDTV 720
K ++ KA ++ ++ GI P+ + Y+++I+++GKA A L Q++RS GV+ D V
Sbjct: 412 KTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQV 471
Query: 719 SYSTLLSMYAENQKYLEALSVFSEMKELNCLPDLTTCNIMIDVYGQLDMAKEADRLFWSM 540
Y T++ Y A + E+K LPD I + + +EA +F
Sbjct: 472 LYQTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTEEATWVFRQA 527
Query: 539 SKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDI--DQNVVTYNTMIKIYGKTL 366
+ G ++ + ++ +Y + + I +F M+ D NV+ ++ YGK
Sbjct: 528 FESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAM--VLNAYGKQR 585
Query: 365 EHEKANNLIQEMQSRG-IEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGVEVDQVLY 189
E EKA+ + +EMQ G + P+ + + ++S++ + LFQ+L S + L+
Sbjct: 586 EFEKADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVESLFQRLESDPNVNSKELH 644
Query: 188 QTMIVAYERAGLVGHAKRLLHELK 117
+ YERA + A R+++ ++
Sbjct: 645 LVVAALYERADKLNDASRVMNRMR 668
Score = 105 bits (262), Expect = 3e-20
Identities = 74/282 (26%), Positives = 136/282 (48%), Gaps = 4/282 (1%)
Frame = -2
Query: 1148 SVYAYNVVLRNVLRAKQWEIAYGLFDEMRQRALSPDRYTYSTLITQFGKEGKFDDALSWL 969
+V YN +++ + + E A L EM+ R + P+ TYST+I+ +GK GK D A +
Sbjct: 399 NVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLF 458
Query: 968 QKMEHDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKQSGICPDLVAYNSMINVFGKA 789
QK+ V D VLY +I ++ A + LK PD + + I + KA
Sbjct: 459 QKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKA 514
Query: 788 KLFREARVLLQEMRSVGVKPDTVSYSTLLSMYAENQKYLEALSVFSEMKELNCLPDLTTC 609
EA + ++ G D + ++++Y+ NQ+Y+ + VF +M+ PD
Sbjct: 515 GRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVI 574
Query: 608 NIMIDVYGQLDMAKEADRLFWSMSKMG-IEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQ 432
++++ YG+ ++AD ++ M + G + P+ V + +L +Y + F LF Q
Sbjct: 575 AMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVESLF---Q 630
Query: 431 RKDIDQNVVT---YNTMIKIYGKTLEHEKANNLIQEMQSRGI 315
R + D NV + + + +Y + + A+ ++ M+ RGI
Sbjct: 631 RLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGI 672
>ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297316573|gb|EFH46996.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 680
Score = 784 bits (2024), Expect = 0.0
Identities = 394/501 (78%), Positives = 439/501 (87%), Gaps = 8/501 (1%)
Frame = -2
Query: 1484 RHRSIFVVISCSS--------TKDIWRKTPKSTTLRPSSFLQPYRRKPEVGYLDHSIDMD 1329
R R++ +S SS TK +WRK P+ T L+ +RR +LDH++DMD
Sbjct: 36 RQRNLIFKVSASSSSSSPSTQTKKVWRKQPEKNTTSSFQALRKHRRYQRSAFLDHNVDMD 95
Query: 1328 ELVSSINQTTNEQELFALLSPYKSRQLSIRFMVTVLSRETDWQRSLALLDWINEQALYTP 1149
EL++SI+QT NE+ELF+LLS YK RQLSIRFMV++LSRE DWQRSLALLDW++E+A YTP
Sbjct: 96 ELLASIHQTQNEKELFSLLSTYKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTP 155
Query: 1148 SVYAYNVVLRNVLRAKQWEIAYGLFDEMRQRALSPDRYTYSTLITQFGKEGKFDDALSWL 969
SV+AYNVVLRNVLRAKQ+ IA+GLFDEMRQRAL+PDRYTYSTLIT FGKEG FD ALSWL
Sbjct: 156 SVFAYNVVLRNVLRAKQFGIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWL 215
Query: 968 QKMEHDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKQSGICPDLVAYNSMINVFGKA 789
QKME D VSGDLVLYSNLIELSR+LCDYSKAISIFSRLK+SGI PDLVAYNSMINV+GKA
Sbjct: 216 QKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKA 275
Query: 788 KLFREARVLLQEMRSVGVKPDTVSYSTLLSMYAENQKYLEALSVFSEMKELNCLPDLTTC 609
KLF+EARVL++EM GV P+TVSYSTLLS+Y EN K+LEALSVF+EMKE+NC DLTTC
Sbjct: 276 KLFKEARVLIKEMNEAGVSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTC 335
Query: 608 NIMIDVYGQLDMAKEADRLFWSMSKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQR 429
NIMIDVYGQLDM KEADRLFWS+ KM IEPNVVSYNT+LRVYGEAELFGEAIHLFRLMQR
Sbjct: 336 NIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQR 395
Query: 428 KDIDQNVVTYNTMIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWDKAGKLDR 249
KDI+QNVVTYNTMIKIYGKT+EHEKA NL+QEMQSRGIEPNAITYSTIISIW KAGKLDR
Sbjct: 396 KDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDR 455
Query: 248 AAMLFQKLRSSGVEVDQVLYQTMIVAYERAGLVGHAKRLLHELKHPDNIPRATAITILAG 69
AA LFQKLRSSGVE+DQVLYQTMIVAYER GL+GHAKRLLHELK PDNIPR TAITILA
Sbjct: 456 AATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAK 515
Query: 68 AGRIEEATWVFRQAYNAGEIK 6
AG EEATWVFRQA+ +GE+K
Sbjct: 516 AGSTEEATWVFRQAFESGEVK 536
Score = 121 bits (303), Expect = 5e-25
Identities = 75/322 (23%), Positives = 158/322 (49%), Gaps = 1/322 (0%)
Frame = -2
Query: 1079 LFDEMRQRALSPDRYTYSTLITQFGKEGKFDDALSWLQKMEHDHVSGDLVLYSNLIELSR 900
LF +R+ + P+ +Y+T++ +G+ F +A+ + M+ + ++V Y+ +I++
Sbjct: 354 LFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 413
Query: 899 KLCDYSKAISIFSRLKQSGICPDLVAYNSMINVFGKAKLFREARVLLQEMRSVGVKPDTV 720
K ++ KA ++ ++ GI P+ + Y+++I+++GKA A L Q++RS GV+ D V
Sbjct: 414 KTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQV 473
Query: 719 SYSTLLSMYAENQKYLEALSVFSEMKELNCLPDLTTCNIMIDVYGQLDMAKEADRLFWSM 540
Y T++ Y A + E+K LPD I + + +EA +F
Sbjct: 474 LYQTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGSTEEATWVFRQA 529
Query: 539 SKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIDQNVVTYNTMIKIYGKTLEH 360
+ G ++ + ++ +Y + + I +F M+ + ++ YGK E
Sbjct: 530 FESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMVLNAYGKQREF 589
Query: 359 EKANNLIQEMQSRG-IEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGVEVDQVLYQT 183
EKA+ + +EMQ G + P+ + + ++S++ + LF++L S + L+
Sbjct: 590 EKADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVESLFERLESDPNVNSKELHLV 648
Query: 182 MIVAYERAGLVGHAKRLLHELK 117
+ YERA + A R+++ ++
Sbjct: 649 VAALYERADKLNDASRVMNRMR 670
Score = 104 bits (259), Expect = 7e-20
Identities = 73/282 (25%), Positives = 136/282 (48%), Gaps = 4/282 (1%)
Frame = -2
Query: 1148 SVYAYNVVLRNVLRAKQWEIAYGLFDEMRQRALSPDRYTYSTLITQFGKEGKFDDALSWL 969
+V YN +++ + + E A L EM+ R + P+ TYST+I+ +GK GK D A +
Sbjct: 401 NVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLF 460
Query: 968 QKMEHDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKQSGICPDLVAYNSMINVFGKA 789
QK+ V D VLY +I ++ A + LK PD + + I + KA
Sbjct: 461 QKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKA 516
Query: 788 KLFREARVLLQEMRSVGVKPDTVSYSTLLSMYAENQKYLEALSVFSEMKELNCLPDLTTC 609
EA + ++ G D + ++++Y+ NQ+Y+ + VF +M+ PD
Sbjct: 517 GSTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAI 576
Query: 608 NIMIDVYGQLDMAKEADRLFWSMSKMG-IEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQ 432
++++ YG+ ++AD ++ M + G + P+ V + +L +Y + F LF +
Sbjct: 577 AMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVESLF---E 632
Query: 431 RKDIDQNVVT---YNTMIKIYGKTLEHEKANNLIQEMQSRGI 315
R + D NV + + + +Y + + A+ ++ M+ RGI
Sbjct: 633 RLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGI 674
>ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543458|gb|EEF44989.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 654
Score = 763 bits (1971), Expect = 0.0
Identities = 388/489 (79%), Positives = 433/489 (88%), Gaps = 1/489 (0%)
Frame = -2
Query: 1469 FVVISCSSTK-DIWRKTPKSTTLRPSSFLQPYRRKPEVGYLDHSIDMDELVSSINQTTNE 1293
F+++S S+TK D+W +T K+T PS YLDHS+DM +L+ SI+QT NE
Sbjct: 41 FLLLSSSATKRDMWTRTQKTT---PS-------------YLDHSVDMKQLLISISQTQNE 84
Query: 1292 QELFALLSPYKSRQLSIRFMVTVLSRETDWQRSLALLDWINEQALYTPSVYAYNVVLRNV 1113
EL++LLSPYK RQLSIRFMV+++S+E DWQRSLALLDWINE A Y+PSV+AYNVVLRNV
Sbjct: 85 VELYSLLSPYKERQLSIRFMVSLISQEADWQRSLALLDWINEVARYSPSVFAYNVVLRNV 144
Query: 1112 LRAKQWEIAYGLFDEMRQRALSPDRYTYSTLITQFGKEGKFDDALSWLQKMEHDHVSGDL 933
LRAK+W++A+GLFDEMRQRALSPDRYTYSTLIT FGK G FD++L WLQ+ME D VSGDL
Sbjct: 145 LRAKKWDLAHGLFDEMRQRALSPDRYTYSTLITSFGKAGMFDESLFWLQQMEQDRVSGDL 204
Query: 932 VLYSNLIELSRKLCDYSKAISIFSRLKQSGICPDLVAYNSMINVFGKAKLFREARVLLQE 753
VLYSNLIELSRKLCDYSKAISIF RLK+SGI PDLVAYNSMINVFGKA+LFREAR+L+ E
Sbjct: 205 VLYSNLIELSRKLCDYSKAISIFMRLKRSGITPDLVAYNSMINVFGKARLFREARMLVHE 264
Query: 752 MRSVGVKPDTVSYSTLLSMYAENQKYLEALSVFSEMKELNCLPDLTTCNIMIDVYGQLDM 573
MR VGV PDTVSYSTLLS+Y EN+K++EALSVF+EM E NC DL TCNIMIDVYGQLDM
Sbjct: 265 MREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMTCNIMIDVYGQLDM 324
Query: 572 AKEADRLFWSMSKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIDQNVVTYNT 393
KEADRLFWSM KMGIEPNVVSYNTLL+VYGEAELFGEAIHLFRLMQRK+I+QNVVTYNT
Sbjct: 325 VKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNT 384
Query: 392 MIKIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSG 213
MIKIYGK+LEHEKA NL+QEMQ RGIEPNAITYSTIISIW KAGKLDRAAMLFQKLRSSG
Sbjct: 385 MIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSG 444
Query: 212 VEVDQVLYQTMIVAYERAGLVGHAKRLLHELKHPDNIPRATAITILAGAGRIEEATWVFR 33
VE+DQVLYQTMIVAYERAGLV HAKRLLH+LK PD IPR TAI ILA AGRIEEATWVFR
Sbjct: 445 VEIDQVLYQTMIVAYERAGLVAHAKRLLHDLKCPDIIPRDTAIKILARAGRIEEATWVFR 504
Query: 32 QAYNAGEIK 6
QA++AGE+K
Sbjct: 505 QAFDAGEVK 513
Score = 120 bits (302), Expect = 7e-25
Identities = 100/436 (22%), Positives = 202/436 (46%), Gaps = 68/436 (15%)
Frame = -2
Query: 1223 LSRET-DWQRSLALLDWINEQALYTPSVYAYNVVLRNVLRAKQWEIAYGLFDEMRQRALS 1047
LSR+ D+ +++++ + + TP + AYN ++ +A+ + A L EMR+ +
Sbjct: 213 LSRKLCDYSKAISIFMRLKRSGI-TPDLVAYNSMINVFGKARLFREARMLVHEMREVGVL 271
Query: 1046 PDRYTYSTLITQFGKEGKFDDALSWLQKMEHDHVSGDLVLYSNLIELSRKLCDYSKAISI 867
PD +YSTL++ + + KF +ALS +M + S DL+ + +I++ +L +A +
Sbjct: 272 PDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRL 331
Query: 866 FSRLKQSGICPDLVAYNSMINVFGKAKLFREARVLLQEMRSVGVKPDTVSYSTLLSMYAE 687
F +++ GI P++V+YN+++ V+G+A+LF EA L + M+ ++ + V+Y+T++ +Y +
Sbjct: 332 FWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGK 391
Query: 686 NQKYLEALSVFSEMKELNCLPDLTTCNIMIDVYGQLDMAKEADRLFWSMSKMGIE----- 522
+ ++ +A ++ EM++ P+ T + +I ++G+ A LF + G+E
Sbjct: 392 SLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVL 451
Query: 521 --------------------------PNVVSYNTLLRVYGEAELFGEAIHLFR------- 441
P+++ +T +++ A EA +FR
Sbjct: 452 YQTMIVAYERAGLVAHAKRLLHDLKCPDIIPRDTAIKILARAGRIEEATWVFRQAFDAGE 511
Query: 440 ------------LMQRKDIDQNVV----------------TYNTMIKIYGKTLEHEKANN 345
L R NVV ++ YGK E EKA+
Sbjct: 512 VKDISVFRCMIELFSRNKRPANVVEVFEKMRGAGYFPDSDVIALVLNAYGKLREFEKADA 571
Query: 344 LIQEMQSRG-IEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGVEVDQVLYQTMIVAY 168
+ +EMQ + P+ + + ++S++ LF+KL S + L+ + Y
Sbjct: 572 VYREMQEEECVFPDEVHFQ-MLSLYGARKDFIMVESLFEKLDSDPNINKKELHLVVASIY 630
Query: 167 ERAGLVGHAKRLLHEL 120
ER + A R+++ +
Sbjct: 631 ERQNRLNDASRIMNRM 646
Score = 99.0 bits (245), Expect = 3e-18
Identities = 69/282 (24%), Positives = 135/282 (47%), Gaps = 4/282 (1%)
Frame = -2
Query: 1148 SVYAYNVVLRNVLRAKQWEIAYGLFDEMRQRALSPDRYTYSTLITQFGKEGKFDDALSWL 969
+V YN +++ ++ + E A L EM++R + P+ TYST+I+ +GK GK D A
Sbjct: 378 NVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLF 437
Query: 968 QKMEHDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKQSGICPDLVAYNSMINVFGKA 789
QK+ V D VLY +I + + A + LK CPD++ ++ I + +A
Sbjct: 438 QKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHDLK----CPDIIPRDTAIKILARA 493
Query: 788 KLFREARVLLQEMRSVGVKPDTVSYSTLLSMYAENQKYLEALSVFSEMKELNCLPDLTTC 609
EA + ++ G D + ++ +++ N++ + VF +M+ PD
Sbjct: 494 GRIEEATWVFRQAFDAGEVKDISVFRCMIELFSRNKRPANVVEVFEKMRGAGYFPDSDVI 553
Query: 608 NIMIDVYGQLDMAKEADRLFWSMSKMG-IEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQ 432
++++ YG+L ++AD ++ M + + P+ V + +L +YG + F I + L +
Sbjct: 554 ALVLNAYGKLREFEKADAVYREMQEEECVFPDEVHFQ-MLSLYGARKDF---IMVESLFE 609
Query: 431 RKDIDQNV---VTYNTMIKIYGKTLEHEKANNLIQEMQSRGI 315
+ D D N+ + + IY + A+ ++ M G+
Sbjct: 610 KLDSDPNINKKELHLVVASIYERQNRLNDASRIMNRMSKEGM 651