BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025888
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269723.2| PREDICTED: DNA-directed RNA polymerases I, I...   135   3e-30
emb|CBI35146.3| unnamed protein product [Vitis vinifera]              135   3e-30
ref|XP_002297750.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26
emb|CBI30093.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ri...   117   1e-24

>ref|XP_002269723.2| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Vitis vinifera]
          Length = 221

 Score =  135 bits (340), Expect = 3e-30
 Identities = 67/116 (57%), Positives = 87/116 (75%)
 Frame = -3

Query: 350 GGNSCITSKADTGTAESHRYYLARRTVLEMLRDRGCDIEHSEITRSLSDFRSVFGNHPDP 171
           G  SCIT+  + G+ ES+RYYL+RRT+ +ML DRG ++ HSE+TRSLSDFR+ FG++PDP
Sbjct: 9   GNGSCITADMEQGSIESYRYYLSRRTLFQMLSDRGYNVPHSELTRSLSDFRASFGHNPDP 68

Query: 170 DHLRICALLSSNPSKKILVIFGGPGEINKAKAIHILCNIPNKESLHRIIIVLQDKM 3
             LRIC  L S+PSKKILV+F G  EI KA  I ++    N+E LHR+I+VLQ KM
Sbjct: 69  SRLRICLPLISSPSKKILVVFCGTDEIRKA-VIRVIFQQINREGLHRLILVLQSKM 123


>emb|CBI35146.3| unnamed protein product [Vitis vinifera]
          Length = 731

 Score =  135 bits (340), Expect = 3e-30
 Identities = 67/116 (57%), Positives = 87/116 (75%)
 Frame = -3

Query: 350 GGNSCITSKADTGTAESHRYYLARRTVLEMLRDRGCDIEHSEITRSLSDFRSVFGNHPDP 171
           G  SCIT+  + G+ ES+RYYL+RRT+ +ML DRG ++ HSE+TRSLSDFR+ FG++PDP
Sbjct: 519 GNGSCITADMEQGSIESYRYYLSRRTLFQMLSDRGYNVPHSELTRSLSDFRASFGHNPDP 578

Query: 170 DHLRICALLSSNPSKKILVIFGGPGEINKAKAIHILCNIPNKESLHRIIIVLQDKM 3
             LRIC  L S+PSKKILV+F G  EI KA  I ++    N+E LHR+I+VLQ KM
Sbjct: 579 SRLRICLPLISSPSKKILVVFCGTDEIRKA-VIRVIFQQINREGLHRLILVLQSKM 633


>ref|XP_002297750.1| predicted protein [Populus trichocarpa] gi|222845008|gb|EEE82555.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  122 bits (305), Expect = 4e-26
 Identities = 63/112 (56%), Positives = 78/112 (69%)
 Frame = -3

Query: 338 CITSKADTGTAESHRYYLARRTVLEMLRDRGCDIEHSEITRSLSDFRSVFGNHPDPDHLR 159
           C+T   D G+AES+RYY++RRTVLEML+DRG D+  SE+ RSL++FRSVFGN PD D LR
Sbjct: 24  CLTDFVDEGSAESYRYYISRRTVLEMLKDRGYDVLDSELNRSLTEFRSVFGNSPDLDSLR 83

Query: 158 ICALLSSNPSKKILVIFGGPGEINKAKAIHILCNIPNKESLHRIIIVLQDKM 3
               L S P KK LV+F G  EI  A    +   I NKESLH +I++LQ KM
Sbjct: 84  FSVSLRSIPHKKTLVMFLGTDEIKTANIRTVYGQILNKESLHGLILILQSKM 135


>emb|CBI30093.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  117 bits (292), Expect = 1e-24
 Identities = 65/111 (58%), Positives = 78/111 (70%), Gaps = 1/111 (0%)
 Frame = -3

Query: 338 CITSKADTGTAESHRYYLARRTVLEMLRDRGCDIEHSEITRSLSDFRSVFGNHPDPDHLR 159
           C++S  D G  ESHRYYLARRT+LEMLRDRG  I   +I  SL DFRS +   PDPD LR
Sbjct: 121 CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 180

Query: 158 ICALLSSNPSKKILVIFGGPGEINKAKAIH-ILCNIPNKESLHRIIIVLQD 9
           I A L S+PSKKILVIF GP ++ K  AI  I   I NK+SL ++I+VLQ+
Sbjct: 181 ISAALRSDPSKKILVIFCGP-DVVKVNAIRSIATQIVNKDSLSKLILVLQN 230


>ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
           gi|223531389|gb|EEF33224.1| DNA-directed RNA polymerase
           II, putative [Ricinus communis]
          Length = 238

 Score =  117 bits (292), Expect = 1e-24
 Identities = 63/129 (48%), Positives = 85/129 (65%)
 Frame = -3

Query: 389 GLGYVSPTRSTPGGGNSCITSKADTGTAESHRYYLARRTVLEMLRDRGCDIEHSEITRSL 210
           G G  +  R    G   C +S AD GT E+HRYYL+RRTVLEMLRDRG  +  SEI  SL
Sbjct: 12  GNGTDASERFNMEGLGKCFSSYADDGTHETHRYYLSRRTVLEMLRDRGYSVPSSEIDLSL 71

Query: 209 SDFRSVFGNHPDPDHLRICALLSSNPSKKILVIFGGPGEINKAKAIHILCNIPNKESLHR 30
            +FR++ G +PD D L+  A  +S+PSK++LV+FGGPG I  +    I   I NK+SL  
Sbjct: 72  QEFRAIHGPNPDIDRLKFSATHTSDPSKRMLVLFGGPGIIKVSTIRAIAGQIVNKDSLTG 131

Query: 29  IIIVLQDKM 3
           +I+VLQ+++
Sbjct: 132 LILVLQNQI 140