BLASTX nr result

ID: Atractylodes21_contig00025878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025878
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277528.2| PREDICTED: uncharacterized protein LOC100253...    80   2e-13
ref|XP_002525522.1| nucleic acid binding protein, putative [Rici...    75   7e-12
ref|XP_002325510.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_003610912.1| Far upstream element-binding protein [Medica...    64   1e-08
ref|XP_002327387.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07

>ref|XP_002277528.2| PREDICTED: uncharacterized protein LOC100253453 [Vitis vinifera]
          Length = 772

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/77 (54%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
 Frame = +2

Query: 17  DPSYASGPGMAYGAPPPVQPAYSQPAPVQPSYDQSIP-QAGGY----VTXXXXXXXXXXX 181
           DP+Y SGP  AYGA P  QP Y QP P QPSYDQSIP Q+GGY     T           
Sbjct: 696 DPTYNSGPASAYGAQPSGQPGYVQPTPTQPSYDQSIPAQSGGYGAVPATAPVGYGKSLSP 755

Query: 182 XXGYAQYDNSQMYAAHR 232
             GY QYD +QMY AHR
Sbjct: 756 QPGYPQYDATQMYGAHR 772


>ref|XP_002525522.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223535201|gb|EEF36880.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 798

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 37/78 (47%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
 Frame = +2

Query: 17  DPSYASGPGMAYGAPPPVQPAYSQPAPVQPSYDQSIPQAGGY------VTXXXXXXXXXX 178
           DP+YA+GPG AY AP   Q  Y+QP P QPSYDQS+PQ+  Y       +          
Sbjct: 721 DPAYATGPGSAYAAPASGQQGYAQPTPTQPSYDQSVPQSTAYAAAAPPASAPVSYGKTVS 780

Query: 179 XXXGYAQYDNSQMYAAHR 232
              GY QYD++QMYAA R
Sbjct: 781 PQPGYPQYDSTQMYAAPR 798


>ref|XP_002325510.1| predicted protein [Populus trichocarpa] gi|222862385|gb|EEE99891.1|
           predicted protein [Populus trichocarpa]
          Length = 581

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/76 (51%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
 Frame = +2

Query: 17  DPSYASGPGMAYGAPPPVQPAYSQPAPVQPSYDQSIPQAGGY----VTXXXXXXXXXXXX 184
           DP+Y S P  AYGAP   Q  Y+QPAP QPSYDQS+PQ+ GY     T            
Sbjct: 509 DPAYGSAP--AYGAPAS-QQGYAQPAPTQPSYDQSVPQSAGYGAAPATAPVGYGKTVSPQ 565

Query: 185 XGYAQYDNSQMYAAHR 232
            GY QYD++QMYAA R
Sbjct: 566 PGYPQYDSTQMYAAPR 581


>ref|XP_003610912.1| Far upstream element-binding protein [Medicago truncatula]
           gi|355512247|gb|AES93870.1| Far upstream element-binding
           protein [Medicago truncatula]
          Length = 807

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/79 (41%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
 Frame = +2

Query: 17  DPSYASGPGMAYGAPPPVQPAYSQPAPVQPSYDQSIPQAGGYV-------TXXXXXXXXX 175
           DP+Y+SG    Y A P VQP Y QP P Q  YDQS PQ  GY                  
Sbjct: 729 DPAYSSGAAQTYSAAPTVQPGYVQPTPTQTGYDQSNPQPAGYAAVPPAAGAPAAYGKTVS 788

Query: 176 XXXXGYAQYDNSQMYAAHR 232
                YAQYD++Q+Y A R
Sbjct: 789 PQPAAYAQYDSTQVYGAPR 807


>ref|XP_002327387.1| predicted protein [Populus trichocarpa] gi|222835757|gb|EEE74192.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/71 (46%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
 Frame = +2

Query: 17  DPSYASGPGMAYGAPPPVQPAYSQPAPVQPSYDQSIPQAGGYV----TXXXXXXXXXXXX 184
           DP+Y SGP  A+ AP   Q AY+QP   QPSYDQS+PQ+ GYV    T            
Sbjct: 334 DPAYGSGP--AFSAPTS-QQAYAQPTAAQPSYDQSVPQSAGYVAAPATAPVGYGKTVSPQ 390

Query: 185 XGYAQYDNSQM 217
            G+ QYD++QM
Sbjct: 391 PGFPQYDSTQM 401


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