BLASTX nr result

ID: Atractylodes21_contig00025844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025844
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB16976.1| GTP-binding-like protein [Solanum tuberosum]           122   1e-30
ref|XP_002274573.1| PREDICTED: translocase of chloroplast 34, ch...   114   8e-29
emb|CAN63847.1| hypothetical protein VITISV_028305 [Vitis vinifera]   114   8e-29
gb|ABA40447.1| unknown [Solanum tuberosum]                            110   3e-28
ref|XP_002278775.1| PREDICTED: translocase of chloroplast 34, ch...   112   4e-28

>gb|ABB16976.1| GTP-binding-like protein [Solanum tuberosum]
          Length = 301

 Score =  122 bits (305), Expect(2) = 1e-30
 Identities = 54/79 (68%), Positives = 67/79 (84%)
 Frame = +3

Query: 129 KILPNGAAWIPNIVETITKVATNESKSILVDQKLIDGPNANDRGKMFIPLILAFQYLFVV 308
           KILPNG AWIPN+++TIT+V  +ESK ILVDQKLI+GPN N++GK+ IPLI AFQY FVV
Sbjct: 222 KILPNGTAWIPNLLQTITEVVASESKGILVDQKLIEGPNPNNKGKLLIPLIAAFQYFFVV 281

Query: 309 KRVQKWINDDIMKEPKSSW 365
           KR+QKWI +DI +E + SW
Sbjct: 282 KRIQKWIKNDIARETRPSW 300



 Score = 36.2 bits (82), Expect(2) = 1e-30
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +2

Query: 62  KGHAIPVVLVENSSRCNKNDSDE 130
           K  ++P+V VENS RCNKN+ DE
Sbjct: 199 KASSVPIVCVENSGRCNKNELDE 221


>ref|XP_002274573.1| PREDICTED: translocase of chloroplast 34, chloroplastic [Vitis
           vinifera] gi|296083376|emb|CBI23265.3| unnamed protein
           product [Vitis vinifera]
          Length = 310

 Score =  114 bits (286), Expect(2) = 8e-29
 Identities = 52/80 (65%), Positives = 64/80 (80%)
 Frame = +3

Query: 129 KILPNGAAWIPNIVETITKVATNESKSILVDQKLIDGPNANDRGKMFIPLILAFQYLFVV 308
           KILPNG AWIPN+V+TIT   +N SK ILVD+KLI+GPN N+RGK+ IP ILAFQY F+V
Sbjct: 222 KILPNGTAWIPNLVKTITDAVSNGSKGILVDKKLIEGPNPNERGKLLIPFILAFQYFFIV 281

Query: 309 KRVQKWINDDIMKEPKSSWE 368
           KR+Q+ I  D+ KE K+ WE
Sbjct: 282 KRIQRAIKSDMAKERKAPWE 301



 Score = 37.4 bits (85), Expect(2) = 8e-29
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = +2

Query: 74  IPVVLVENSSRCNKNDSDE 130
           IPVVLVENS RC+KN+SDE
Sbjct: 203 IPVVLVENSGRCHKNESDE 221


>emb|CAN63847.1| hypothetical protein VITISV_028305 [Vitis vinifera]
          Length = 310

 Score =  114 bits (286), Expect(2) = 8e-29
 Identities = 52/80 (65%), Positives = 64/80 (80%)
 Frame = +3

Query: 129 KILPNGAAWIPNIVETITKVATNESKSILVDQKLIDGPNANDRGKMFIPLILAFQYLFVV 308
           KILPNG AWIPN+V+TIT   +N SK ILVD+KLI+GPN N+RGK+ IP ILAFQY F+V
Sbjct: 222 KILPNGTAWIPNLVKTITDAVSNGSKGILVDKKLIEGPNPNERGKLLIPFILAFQYFFIV 281

Query: 309 KRVQKWINDDIMKEPKSSWE 368
           KR+Q+ I  D+ KE K+ WE
Sbjct: 282 KRIQRAIKSDMAKERKAPWE 301



 Score = 37.4 bits (85), Expect(2) = 8e-29
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = +2

Query: 74  IPVVLVENSSRCNKNDSDE 130
           IPVVLVENS RC+KN+SDE
Sbjct: 203 IPVVLVENSGRCHKNESDE 221


>gb|ABA40447.1| unknown [Solanum tuberosum]
          Length = 225

 Score =  110 bits (275), Expect(2) = 3e-28
 Identities = 51/79 (64%), Positives = 63/79 (79%)
 Frame = +3

Query: 129 KILPNGAAWIPNIVETITKVATNESKSILVDQKLIDGPNANDRGKMFIPLILAFQYLFVV 308
           KILP+G AWIPN+V+TIT    + SK ILVDQKLI+GPN N+RGK+ IP ILAFQY FVV
Sbjct: 146 KILPSGTAWIPNLVQTITDAVLSGSKGILVDQKLIEGPNPNNRGKVLIPFILAFQYFFVV 205

Query: 309 KRVQKWINDDIMKEPKSSW 365
           KR+QK I +DI +E + +W
Sbjct: 206 KRIQKSIKNDIARESRPAW 224



 Score = 39.7 bits (91), Expect(2) = 3e-28
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +2

Query: 71  AIPVVLVENSSRCNKNDSDE 130
           +IPVVLVENS RCNKN+SDE
Sbjct: 126 SIPVVLVENSGRCNKNESDE 145


>ref|XP_002278775.1| PREDICTED: translocase of chloroplast 34, chloroplastic [Vitis
           vinifera] gi|297737377|emb|CBI26578.3| unnamed protein
           product [Vitis vinifera]
          Length = 308

 Score =  112 bits (279), Expect(2) = 4e-28
 Identities = 53/80 (66%), Positives = 66/80 (82%)
 Frame = +3

Query: 129 KILPNGAAWIPNIVETITKVATNESKSILVDQKLIDGPNANDRGKMFIPLILAFQYLFVV 308
           KILPNG AWIPN+V+TI  + +N SK+ILVD+KLI+GPN N RGK  IPLI+AFQYL VV
Sbjct: 222 KILPNGTAWIPNLVKTIIDLVSNGSKAILVDKKLIEGPNPNKRGKFLIPLIVAFQYL-VV 280

Query: 309 KRVQKWINDDIMKEPKSSWE 368
           K++Q+ I DD+ KEPK+ WE
Sbjct: 281 KQIQRTIKDDVKKEPKAPWE 300



 Score = 37.7 bits (86), Expect(2) = 4e-28
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = +2

Query: 71  AIPVVLVENSSRCNKNDSDE 130
           AIPV+ VENS RCNKN+SDE
Sbjct: 202 AIPVIPVENSGRCNKNESDE 221


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