BLASTX nr result

ID: Atractylodes21_contig00025827 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025827
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31012.3| unnamed protein product [Vitis vinifera]               74   2e-11
dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl...    73   3e-11
gb|EEE65611.1| hypothetical protein OsJ_21159 [Oryza sativa Japo...    64   1e-08
emb|CAN60436.1| hypothetical protein VITISV_014041 [Vitis vinifera]    64   1e-08
gb|AAK70633.1|AC091238_11 Putative gag-pol polyprotein [Oryza sa...    64   1e-08

>emb|CBI31012.3| unnamed protein product [Vitis vinifera]
          Length = 468

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/73 (46%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
 Frame = -1

Query: 221 SQITASSLPFFCKKTGHFKKDCEGFKDWLNKKGNVDHFFSLETTNYS-NDNSWWFDTASP 45
           S I      FFCKK GH KK C  F++WL KKGN   F   E+   + N N+WW D+ S 
Sbjct: 275 SDIKKDEKCFFCKKKGHVKKKCLKFQNWLEKKGNPTSFICYESNMVNVNTNTWWIDSGST 334

Query: 44  IHIVNSMQGLSKI 6
           IHI NS+QG+  +
Sbjct: 335 IHISNSLQGMQNL 347


>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
          Length = 1321

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = -1

Query: 194 FFCKKTGHFKKDCEGFKDWLNKKGNVDHFFSLETTNYS-NDNSWWFDTASPIHIVNSMQG 18
           FFCKK GH KK+C GF+ WL KKG        E+   S N N+WW D+ S IHI NS+QG
Sbjct: 209 FFCKKKGHMKKNCPGFQKWLEKKGKSISLVCYESNMVSVNINTWWIDSGSTIHIANSLQG 268

Query: 17  LSKI 6
           +  +
Sbjct: 269 MQNL 272


>gb|EEE65611.1| hypothetical protein OsJ_21159 [Oryza sativa Japonica Group]
          Length = 345

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 11/105 (10%)
 Frame = -1

Query: 299 GAKMNL*KMKRHENGPSIKEP--FHDTLSQITASS------LPFFCKKTGHFKKDCEGFK 144
           G   N    K+  N PS +     H   +Q+ A        L  FCK  GH ++DCEGF+
Sbjct: 153 GESSNSQNKKKKPNTPSTQASNGAHKGKAQVPAGQNSAGKFLCKFCKAEGHAQRDCEGFR 212

Query: 143 DWLNKKG-NVDHFFSLETTNY--SNDNSWWFDTASPIHIVNSMQG 18
            WL KKG NVD   +++   Y   +  SWW D+ + +H+ NS+QG
Sbjct: 213 AWLAKKGTNVDIVSNVDELLYVEFSHKSWWIDSGATVHVANSLQG 257


>emb|CAN60436.1| hypothetical protein VITISV_014041 [Vitis vinifera]
          Length = 227

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
 Frame = -1

Query: 194 FFCKKTGHFKKDCEGFKDWLNKKGNVDHFFSLETTNYS-NDNSWWFDTASPIHIVNSMQG 18
           FF KK GH KK C  F+ WL KKGN   F   E+   + N N+WW D+   IHI NS++G
Sbjct: 33  FFYKKKGHVKKKCXKFQKWLEKKGNPTSFVCYESNMVNVNTNTWWIDSGFTIHISNSLKG 92

Query: 17  LSKI 6
           +  +
Sbjct: 93  MQDL 96


>gb|AAK70633.1|AC091238_11 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|21321753|gb|AAM47288.1|AC122146_7 Putative gag-pol
           polyprotein [Oryza sativa Japonica Group]
           gi|31430568|gb|AAP52462.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1225

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
 Frame = -1

Query: 194 FFCKKTGHFKKDCEGFKDWLNKKGNVDHFFSLETTNYS-NDNSWWFDTASPIHIVNSMQG 18
           +FC K+GH +KDC GF  WL+KKG     F  E+ N     NSWW D+ + IH+ NS+QG
Sbjct: 278 YFCGKSGHRQKDCIGFMRWLSKKGTDVISFVDESLNIDYATNSWWIDSGATIHVANSLQG 337

Query: 17  LS 12
            +
Sbjct: 338 FA 339


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