BLASTX nr result

ID: Atractylodes21_contig00025824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025824
         (949 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140517.1| PREDICTED: COP9 signalosome complex subunit ...   408   e-112
ref|XP_002273686.1| PREDICTED: COP9 signalosome complex subunit ...   407   e-111
gb|ABK94750.1| unknown [Populus trichocarpa]                          397   e-108
ref|XP_003546686.1| PREDICTED: COP9 signalosome complex subunit ...   383   e-104
ref|XP_003542787.1| PREDICTED: COP9 signalosome complex subunit ...   383   e-104

>ref|XP_004140517.1| PREDICTED: COP9 signalosome complex subunit 7-like [Cucumis
           sativus] gi|449514708|ref|XP_004164457.1| PREDICTED:
           COP9 signalosome complex subunit 7-like [Cucumis
           sativus]
          Length = 259

 Score =  408 bits (1049), Expect = e-112
 Identities = 204/260 (78%), Positives = 234/260 (90%), Gaps = 2/260 (0%)
 Frame = -1

Query: 778 MDIEQKQAENIDHFVKQASVIKGSSSSLANVIVEATSHPSLFAFSEILSVPNILELQGTE 599
           MDIEQKQ E IDHFVKQAS +KGS+  L +V+ +ATSHPSLFAFSEIL+VPN++EL+GTE
Sbjct: 1   MDIEQKQTEFIDHFVKQASSLKGSA--LGSVVTDATSHPSLFAFSEILAVPNVVELEGTE 58

Query: 598 HSIYLDLLQMFAHGTWSDYKSNASNLPQLTPDQVLKLKQLTMLTLAEANKVLSYDVLMHE 419
           HSIYLD+L++FA+GTWSDYKSN+S LP+L+ DQ LKLKQLT+LTLAE NKVL+YD LM E
Sbjct: 59  HSIYLDVLRLFAYGTWSDYKSNSSRLPELSSDQALKLKQLTVLTLAETNKVLAYDQLMQE 118

Query: 418 LDVVNVRELEDFLINECMYVGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNMIHTLSDWL 239
           LDV NVRELEDFLINECMY GIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNMI TLS+WL
Sbjct: 119 LDVTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNMIRTLSNWL 178

Query: 238 GTSDNLLISIQEKIKWADTMSELDKKHKKENDDRLEEVKNALSLKADMDFRGH-GLFSEP 62
            TSDNLL+SIQEKIKWAD MSELDKKH+K+ DDR+EEVK +LSLKA++D R H  ++SEP
Sbjct: 179 TTSDNLLVSIQEKIKWADNMSELDKKHRKDVDDRVEEVKKSLSLKANIDIREHEEIYSEP 238

Query: 61  GGVMDYDEDR-RSKRRRHPM 5
           GGVMDY+EDR R KRRRHP+
Sbjct: 239 GGVMDYEEDRSRPKRRRHPI 258


>ref|XP_002273686.1| PREDICTED: COP9 signalosome complex subunit 7 isoform 1 [Vitis
           vinifera] gi|297734611|emb|CBI16662.3| unnamed protein
           product [Vitis vinifera]
          Length = 259

 Score =  407 bits (1045), Expect = e-111
 Identities = 205/260 (78%), Positives = 231/260 (88%), Gaps = 2/260 (0%)
 Frame = -1

Query: 778 MDIEQKQAENIDHFVKQASVIKGSSSSLANVIVEATSHPSLFAFSEILSVPNILELQGTE 599
           MDIEQ+QAE ID FVKQAS   GS+  LA VI++ATSHPSLFAFSEIL+VPN++EL GTE
Sbjct: 1   MDIEQRQAELIDAFVKQASTHNGSA--LATVILDATSHPSLFAFSEILAVPNVVELGGTE 58

Query: 598 HSIYLDLLQMFAHGTWSDYKSNASNLPQLTPDQVLKLKQLTMLTLAEANKVLSYDVLMHE 419
           +S+YLD+L++FAHGTWSDYKSN   LPQL PDQ LKLKQLT+LTLAE NKVL YD LM E
Sbjct: 59  NSVYLDMLRLFAHGTWSDYKSNVDRLPQLVPDQALKLKQLTVLTLAETNKVLPYDQLMQE 118

Query: 418 LDVVNVRELEDFLINECMYVGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNMIHTLSDWL 239
           LDV NVRELEDFLINECMY GIVRGKLDQLRRCFEVQFAAGRDLRPGQLG MI TLS+WL
Sbjct: 119 LDVTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGCMIQTLSNWL 178

Query: 238 GTSDNLLISIQEKIKWADTMSELDKKHKKENDDRLEEVKNALSLKADMDFRGH-GLFSEP 62
           GTSDNLL+SIQEKIKWADTMSELDKKH+KE ++R+EEVK + S+KAD+DFRGH  ++SEP
Sbjct: 179 GTSDNLLLSIQEKIKWADTMSELDKKHRKEVEERVEEVKKSFSVKADIDFRGHEEIYSEP 238

Query: 61  GGVMDYDEDR-RSKRRRHPM 5
           GGVMDY+EDR R KRRRHP+
Sbjct: 239 GGVMDYEEDRSRPKRRRHPI 258


>gb|ABK94750.1| unknown [Populus trichocarpa]
          Length = 259

 Score =  397 bits (1021), Expect = e-108
 Identities = 202/260 (77%), Positives = 229/260 (88%), Gaps = 2/260 (0%)
 Frame = -1

Query: 778 MDIEQKQAENIDHFVKQASVIKGSSSSLANVIVEATSHPSLFAFSEILSVPNILELQGTE 599
           MDIEQKQAE IDHFV QAS +K  +S+L  +I+EATSHPSLFAFSEILS P + EL+GTE
Sbjct: 1   MDIEQKQAELIDHFVNQASTLK--ASALWPLIIEATSHPSLFAFSEILSSPTVSELEGTE 58

Query: 598 HSIYLDLLQMFAHGTWSDYKSNASNLPQLTPDQVLKLKQLTMLTLAEANKVLSYDVLMHE 419
           +S  LD+L++FAHGTWSDYKSNA  LPQL PDQVLKLKQLT+LTLAE NKVL YD LM E
Sbjct: 59  NSFCLDVLRLFAHGTWSDYKSNAGRLPQLVPDQVLKLKQLTVLTLAEMNKVLPYDQLMQE 118

Query: 418 LDVVNVRELEDFLINECMYVGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNMIHTLSDWL 239
           LDV NVRELEDFLINECMY GIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNM+ TLS+WL
Sbjct: 119 LDVTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNMLQTLSNWL 178

Query: 238 GTSDNLLISIQEKIKWADTMSELDKKHKKENDDRLEEVKNALSLKADMDFRGH-GLFSEP 62
            TSD+LL+SIQEKIKWAD+ SELDKKH+K+ + R+EEVK +LSLKAD+DFRGH  ++SEP
Sbjct: 179 DTSDDLLVSIQEKIKWADSTSELDKKHQKDVEYRVEEVKKSLSLKADIDFRGHEEIYSEP 238

Query: 61  GGVMDYDEDR-RSKRRRHPM 5
           GGVMDY+EDR R KRRRHP+
Sbjct: 239 GGVMDYEEDRSRPKRRRHPI 258


>ref|XP_003546686.1| PREDICTED: COP9 signalosome complex subunit 7-like [Glycine max]
          Length = 259

 Score =  383 bits (983), Expect = e-104
 Identities = 194/260 (74%), Positives = 226/260 (86%), Gaps = 2/260 (0%)
 Frame = -1

Query: 778 MDIEQKQAENIDHFVKQASVIKGSSSSLANVIVEATSHPSLFAFSEILSVPNILELQGTE 599
           MDIEQKQ+E IDHFVK+AS     +++LA+V+VEATSHPSLFAFSEIL++PN+L+L+ TE
Sbjct: 1   MDIEQKQSELIDHFVKRASAAS-DAAALASVLVEATSHPSLFAFSEILALPNLLQLEATE 59

Query: 598 HSIYLDLLQMFAHGTWSDYKSNASNLPQLTPDQVLKLKQLTMLTLAEANKVLSYDVLMHE 419
           +S YLD+L++FAHGTWSDYKSNA  LPQL  DQ+LKLKQLT+LTLAE  KVL YD LM E
Sbjct: 60  NSAYLDMLRLFAHGTWSDYKSNADRLPQLISDQILKLKQLTVLTLAETYKVLPYDQLMQE 119

Query: 418 LDVVNVRELEDFLINECMYVGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNMIHTLSDWL 239
           LDV NVRELEDFLINECMY GIVRGKLDQLRRCFEVQFAAGRDLRP QLGNMI TLS WL
Sbjct: 120 LDVTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPDQLGNMIQTLSSWL 179

Query: 238 GTSDNLLISIQEKIKWADTMSELDKKHKKENDDRLEEVKNALSLKADMDFRGH-GLFSEP 62
            TS+NLL+SIQEKIKWAD MSE+DKKH+KE ++++EEVK ++  KAD+DFRGH  + SE 
Sbjct: 180 TTSENLLVSIQEKIKWADAMSEIDKKHRKEVEEKVEEVKKSI-FKADIDFRGHEEICSES 238

Query: 61  GGVMDYDEDR-RSKRRRHPM 5
           GGVMDY+EDR R KRRRHP+
Sbjct: 239 GGVMDYEEDRSRPKRRRHPI 258


>ref|XP_003542787.1| PREDICTED: COP9 signalosome complex subunit 7-like [Glycine max]
          Length = 259

 Score =  383 bits (983), Expect = e-104
 Identities = 191/260 (73%), Positives = 228/260 (87%), Gaps = 2/260 (0%)
 Frame = -1

Query: 778 MDIEQKQAENIDHFVKQASVIKGSSSSLANVIVEATSHPSLFAFSEILSVPNILELQGTE 599
           MDIEQKQ+E IDHFVK+AS     +++L++V+VEATSHPSLFAFSEIL++PN+L+L+ TE
Sbjct: 1   MDIEQKQSELIDHFVKRASAAS-DAAALSSVLVEATSHPSLFAFSEILALPNLLQLEATE 59

Query: 598 HSIYLDLLQMFAHGTWSDYKSNASNLPQLTPDQVLKLKQLTMLTLAEANKVLSYDVLMHE 419
           +S YLD+L++FAHGTW+DYKSNA  LPQL PDQ+LKLKQLT+LTLAE  KVL YD LM E
Sbjct: 60  NSAYLDMLRLFAHGTWNDYKSNADRLPQLIPDQILKLKQLTVLTLAETYKVLPYDQLMQE 119

Query: 418 LDVVNVRELEDFLINECMYVGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNMIHTLSDWL 239
           LDV NVRELEDFLINECMY GIVRGKLDQLRRCFEVQFAAGRDLRP QLGNMI TLS+WL
Sbjct: 120 LDVTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPDQLGNMIQTLSNWL 179

Query: 238 GTSDNLLISIQEKIKWADTMSELDKKHKKENDDRLEEVKNALSLKADMDFRGH-GLFSEP 62
            TS+N+L+SIQEKIKWAD MSE+DKKH+K+ ++++EEVK ++  KAD+DFRGH  + SE 
Sbjct: 180 STSENMLVSIQEKIKWADAMSEIDKKHRKDVEEKVEEVKKSI-FKADIDFRGHEEICSES 238

Query: 61  GGVMDYDEDR-RSKRRRHPM 5
           GGVMDY+EDR R KRRRHP+
Sbjct: 239 GGVMDYEEDRSRPKRRRHPI 258


Top