BLASTX nr result

ID: Atractylodes21_contig00025820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025820
         (829 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADW66146.1| RING-H2 zinc finger protein [Solanum nigrum]           200   3e-49
ref|NP_001236683.1| uncharacterized protein LOC100305532 [Glycin...   172   8e-41
ref|NP_001240255.1| uncharacterized protein LOC100786803 [Glycin...   167   2e-39
ref|XP_002533895.1| RING-H2 finger protein ATL3J, putative [Rici...   166   5e-39
emb|CAN82068.1| hypothetical protein VITISV_037474 [Vitis vinifera]   164   2e-38

>gb|ADW66146.1| RING-H2 zinc finger protein [Solanum nigrum]
          Length = 144

 Score =  200 bits (509), Expect = 3e-49
 Identities = 95/141 (67%), Positives = 111/141 (78%), Gaps = 3/141 (2%)
 Frame = +2

Query: 161 MGLSPYSNPSDAGVLCVILVNTAMSISMMKDILGSILHVIGIPMASWED---EASTESVE 331
           MGLSPY+ P+DAGV CVILVNTA SIS++K ++ SILHVIGI  ASWE+   E   +  E
Sbjct: 1   MGLSPYTTPADAGVFCVILVNTATSISIVKGMVRSILHVIGINFASWEEYSIEGPLDPFE 60

Query: 332 CRGTPSKTYMEEFRSRTPTLRYDSLSCSTTTKQECSVCLIEFKPDAEINCLSCGHVFHKS 511
           CRG+PS +YMEEFRSRTP +RYDSL  S    QEC VCL +F  DAEIN LSCGHVFHK 
Sbjct: 61  CRGSPSGSYMEEFRSRTPAVRYDSLCISNLPTQECPVCLADFNHDAEINHLSCGHVFHKL 120

Query: 512 CLEKWLKYWNITCPLCRNHMM 574
           CLEKWLK WN+TCPLCR+++M
Sbjct: 121 CLEKWLKNWNVTCPLCRDYIM 141


>ref|NP_001236683.1| uncharacterized protein LOC100305532 [Glycine max]
           gi|255625823|gb|ACU13256.1| unknown [Glycine max]
          Length = 154

 Score =  172 bits (436), Expect = 8e-41
 Identities = 83/146 (56%), Positives = 108/146 (73%), Gaps = 8/146 (5%)
 Frame = +2

Query: 161 MGLSPYSNPSDAGVLCVILVNTAMSISMMKDILGSILHVIGI--------PMASWEDEAS 316
           MGLS    PS+ GVLCV+LVNT +SIS+ K I+ +ILH++GI        P +    +A+
Sbjct: 1   MGLSSLPAPSE-GVLCVLLVNTVLSISIFKGIVRTILHIVGIHLPSSSTSPSSPDPSQAA 59

Query: 317 TESVECRGTPSKTYMEEFRSRTPTLRYDSLSCSTTTKQECSVCLIEFKPDAEINCLSCGH 496
            ES E   +PS++Y+EEFRSRTPTLR+DS+ CS   + +CSVCL +F+P++EIN LSCGH
Sbjct: 60  PESFELHLSPSESYIEEFRSRTPTLRFDSVCCSKRLEHDCSVCLTQFEPESEINRLSCGH 119

Query: 497 VFHKSCLEKWLKYWNITCPLCRNHMM 574
           +FHK CLEKWL YWNITCPLCR  +M
Sbjct: 120 LFHKVCLEKWLDYWNITCPLCRTPLM 145


>ref|NP_001240255.1| uncharacterized protein LOC100786803 [Glycine max]
           gi|255639664|gb|ACU20126.1| unknown [Glycine max]
          Length = 155

 Score =  167 bits (424), Expect = 2e-39
 Identities = 81/147 (55%), Positives = 107/147 (72%), Gaps = 9/147 (6%)
 Frame = +2

Query: 161 MGLSPYSNPSDAGVLCVILVNTAMSISMMKDILGSILHVIGIPMASWEDEAST------- 319
           MGLS    PS+ GVLCV+LVNT +SIS+ K I+ +ILH++GI ++S    + +       
Sbjct: 1   MGLSSLPAPSE-GVLCVLLVNTVLSISIFKGIVRTILHIVGIHLSSSSSTSPSSPDPSLT 59

Query: 320 --ESVECRGTPSKTYMEEFRSRTPTLRYDSLSCSTTTKQECSVCLIEFKPDAEINCLSCG 493
             ES E   +PS++Y+EEFRSRTPTLR+DS+ C    + +CSVCL +F+P++EIN LSCG
Sbjct: 60  APESFEFHLSPSESYIEEFRSRTPTLRFDSVCCCKQPEHDCSVCLTQFEPESEINRLSCG 119

Query: 494 HVFHKSCLEKWLKYWNITCPLCRNHMM 574
           H+FHK CLEKWL YWNITCPLCR  +M
Sbjct: 120 HLFHKVCLEKWLDYWNITCPLCRTPLM 146


>ref|XP_002533895.1| RING-H2 finger protein ATL3J, putative [Ricinus communis]
           gi|223526146|gb|EEF28485.1| RING-H2 finger protein
           ATL3J, putative [Ricinus communis]
          Length = 156

 Score =  166 bits (421), Expect = 5e-39
 Identities = 82/158 (51%), Positives = 111/158 (70%), Gaps = 8/158 (5%)
 Frame = +2

Query: 161 MGLSPYSNPSDAGVLCVILVNTAMSISMMKDILGSILHVIGIPMASWE--------DEAS 316
           MGLS    PS+ GVLCV+LVNTA+SIS+ K I+ SILH++GI ++S          +E  
Sbjct: 1   MGLSSLPAPSE-GVLCVLLVNTALSISIFKGIVRSILHIVGIRLSSSSSSTASSDYNEDP 59

Query: 317 TESVECRGTPSKTYMEEFRSRTPTLRYDSLSCSTTTKQECSVCLIEFKPDAEINCLSCGH 496
           T+  E R  PS++Y+ EFRSRTP  R+DS+      + +CSVCL  F+P++EINCLSCGH
Sbjct: 60  TDLFEFRLPPSESYINEFRSRTPATRFDSVCRCKQIEHDCSVCLTRFEPESEINCLSCGH 119

Query: 497 VFHKSCLEKWLKYWNITCPLCRNHMMAMAPKETEENTC 610
           +FHK CLEKWL YWN+TCPLCR+ ++   P E + ++C
Sbjct: 120 LFHKVCLEKWLDYWNVTCPLCRSPVI---PSEEDTSSC 154


>emb|CAN82068.1| hypothetical protein VITISV_037474 [Vitis vinifera]
          Length = 223

 Score =  164 bits (415), Expect = 2e-38
 Identities = 84/157 (53%), Positives = 107/157 (68%), Gaps = 5/157 (3%)
 Frame = +2

Query: 155 TNMGLSPYSNPSDAGVLCVILVNTAMSISMMKDILGSILHVIGI-----PMASWEDEAST 319
           ++MGLS    PS+ GVLCV+LVNTA+SIS+ K I+ +ILHVIGI     P +S   E ++
Sbjct: 71  SSMGLSSLPAPSE-GVLCVLLVNTALSISIFKGIVRAILHVIGIHLSATPSSSDSPEPTS 129

Query: 320 ESVECRGTPSKTYMEEFRSRTPTLRYDSLSCSTTTKQECSVCLIEFKPDAEINCLSCGHV 499
           E  E R  PS+T MEEFRSR P +R+D++      + +C+VCL  F+PD+EIN L CGH 
Sbjct: 130 EPFEFRRNPSETCMEEFRSRNPAIRFDTVCSCKRPEHDCAVCLTRFEPDSEINHLPCGHF 189

Query: 500 FHKSCLEKWLKYWNITCPLCRNHMMAMAPKETEENTC 610
           FHK CLEKWL YWNITCPLCR  +M       EE +C
Sbjct: 190 FHKVCLEKWLDYWNITCPLCRTPLM-----PEEETSC 221


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