BLASTX nr result

ID: Atractylodes21_contig00025803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025803
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272014.2| PREDICTED: transcription elongation regulato...    92   3e-17
ref|XP_003538973.1| PREDICTED: transcription elongation regulato...    84   1e-14
ref|XP_003538971.1| PREDICTED: transcription elongation regulato...    84   1e-14
ref|XP_002315059.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_003607202.1| Transcription elongation regulator [Medicago...    81   8e-14

>ref|XP_002272014.2| PREDICTED: transcription elongation regulator 1-like [Vitis
           vinifera] gi|297738259|emb|CBI27460.3| unnamed protein
           product [Vitis vinifera]
          Length = 1046

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/82 (56%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
 Frame = +3

Query: 3   IYAPYASNPLMVAPPQGVWLQPAPVGGLSRPPLLPYPSAFPGSFPLQAHRMPLSSVPPSD 182
           IY  Y+S P   A  QG WLQP  +GGL RPP +PYP+ +P  FPL AH MPL SVP  D
Sbjct: 301 IYPSYSSLPATNASSQGPWLQPPQMGGLPRPPFVPYPAVYPTPFPLPAHGMPLPSVPLPD 360

Query: 183 AQPPG-TSIGVPGVASISSAVS 245
           +QPPG T +G  G   IS+AVS
Sbjct: 361 SQPPGVTPVGTAGGTPISAAVS 382


>ref|XP_003538973.1| PREDICTED: transcription elongation regulator 1-like [Glycine max]
          Length = 857

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
 Frame = +3

Query: 12  PYASNPLMVAPPQGVWLQPAPVGGLSRPPLLPYPSAFPGSFPLQAHRMPLSSVPPSDAQP 191
           PY S P M APPQG+WLQP  + G+ RPP L YP+ FPG FP  A  + L +VP  D+QP
Sbjct: 115 PYPSVPAMAAPPQGLWLQPPQMSGVLRPPYLQYPAPFPGPFPFPARGVALPAVPIPDSQP 174

Query: 192 PG-TSIGVPGVASISSA 239
           PG T +G  G  S  S+
Sbjct: 175 PGVTPVGAAGGTSTPSS 191


>ref|XP_003538971.1| PREDICTED: transcription elongation regulator 1-like [Glycine max]
          Length = 1007

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
 Frame = +3

Query: 12  PYASNPLMVAPPQGVWLQPAPVGGLSRPPLLPYPSAFPGSFPLQAHRMPLSSVPPSDAQP 191
           PY S P M APPQG+WLQP  + G+ RPP L YP+ FPG FP  A  + L +VP  D+QP
Sbjct: 265 PYPSVPAMAAPPQGLWLQPPQMSGVLRPPYLQYPAPFPGPFPFPARGVALPAVPIPDSQP 324

Query: 192 PG-TSIGVPGVASISSA 239
           PG T +G  G  S  S+
Sbjct: 325 PGVTPVGAAGGTSTPSS 341


>ref|XP_002315059.1| predicted protein [Populus trichocarpa] gi|222864099|gb|EEF01230.1|
           predicted protein [Populus trichocarpa]
          Length = 358

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 39/81 (48%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = +3

Query: 6   YAPYASNPLMVAPPQGVWLQPAPVGGLSRPPLLPYPSAFPGSFPLQAHRMPLSSVPPSDA 185
           Y  Y S P+M A PQ +W+ P P+GG+ R P L YP+AFPGSFP   H MP  SV   D+
Sbjct: 216 YPTYPSLPVMAASPQALWMHPPPIGGMPRQPFLSYPAAFPGSFPPPGHGMPYPSVSLPDS 275

Query: 186 QPPG-TSIGVPGVASISSAVS 245
           QPPG   +G      +SS+ S
Sbjct: 276 QPPGVVPVGHSYAIPMSSSAS 296


>ref|XP_003607202.1| Transcription elongation regulator [Medicago truncatula]
           gi|355508257|gb|AES89399.1| Transcription elongation
           regulator [Medicago truncatula]
          Length = 745

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
 Frame = +3

Query: 12  PYASNPLMVAPPQGVWLQPAPVGGLSRPPLLPYPSAFPGSFPLQAHRMPLSSVPPSDAQP 191
           PY   P MVAPPQG WLQP  + G+ RPP   YP+AFPG FP  A    L +VP  D+QP
Sbjct: 225 PYPPIPSMVAPPQGYWLQPPQMSGVLRPPFHQYPAAFPGPFPFPARGGALPAVPVPDSQP 284

Query: 192 PG-TSIGVPGVASISSA 239
           PG T +G   +++ SS+
Sbjct: 285 PGVTPVGAASISAPSSS 301


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